Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra039309.1-P | Field mustard | nucleus | 98.24 | 98.24 |
CDY27354 | Canola | nucleus | 97.65 | 95.42 |
AT2G45850.1 | Thale cress | nucleus | 85.34 | 83.62 |
CDY48928 | Canola | nucleus | 68.33 | 67.73 |
CDY42495 | Canola | nucleus | 66.86 | 67.46 |
CDX71746 | Canola | nucleus | 67.16 | 66.57 |
CDX89109 | Canola | nucleus | 64.22 | 65.37 |
CDY58791 | Canola | nucleus | 61.88 | 64.33 |
CDY51561 | Canola | nucleus | 63.93 | 64.12 |
KRH40471 | Soybean | nucleus | 53.96 | 53.96 |
VIT_15s0046g02930.t01 | Wine grape | nucleus, plastid | 54.25 | 53.62 |
KRH00715 | Soybean | nucleus | 53.67 | 53.51 |
KRH48165 | Soybean | nucleus | 53.08 | 53.24 |
KRH65066 | Soybean | nucleus | 52.49 | 52.65 |
GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 48.97 | 50.15 |
GSMUA_Achr8P11400_001 | Banana | nucleus | 46.92 | 46.24 |
Solyc01g094460.2.1 | Tomato | nucleus | 45.75 | 46.02 |
PGSC0003DMT400000467 | Potato | nucleus | 45.45 | 45.72 |
GSMUA_Achr11P... | Banana | nucleus | 49.56 | 45.07 |
GSMUA_Achr11P... | Banana | nucleus | 47.21 | 43.4 |
GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 23.75 | 41.33 |
CDY45364 | Canola | nucleus | 43.11 | 40.05 |
CDY25500 | Canola | nucleus | 43.11 | 39.73 |
CDX84679 | Canola | nucleus | 30.5 | 39.69 |
CDX79537 | Canola | mitochondrion, nucleus, plastid | 30.5 | 39.69 |
CDY64088 | Canola | nucleus, plasma membrane, plastid | 41.94 | 39.5 |
HORVU2Hr1G123730.3 | Barley | plastid | 23.46 | 38.1 |
CDY34355 | Canola | nucleus | 42.23 | 38.1 |
GSMUA_Achr4P30000_001 | Banana | nucleus | 36.36 | 38.04 |
TraesCS7A01G565900.1 | Wheat | nucleus | 33.43 | 37.13 |
Zm00001d018515_P002 | Maize | nucleus | 40.76 | 35.82 |
CDX82971 | Canola | plastid | 21.99 | 34.88 |
OQU85994 | Sorghum | nucleus | 40.47 | 34.41 |
Os02t0824300-01 | Rice | nucleus | 39.59 | 34.26 |
Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 40.18 | 34.25 |
CDY07239 | Canola | plasma membrane | 23.17 | 34.2 |
CDY01503 | Canola | cytosol | 25.81 | 33.98 |
CDY04392 | Canola | nucleus | 26.69 | 33.96 |
CDY46385 | Canola | nucleus | 37.54 | 33.51 |
CDY39751 | Canola | nucleus | 37.54 | 33.51 |
CDY47428 | Canola | nucleus | 30.21 | 33.33 |
CDX98767 | Canola | nucleus | 31.67 | 32.83 |
CDY41291 | Canola | nucleus | 29.33 | 32.79 |
CDY07238 | Canola | nucleus | 30.21 | 32.59 |
CDX94122 | Canola | cytosol, nucleus, plasma membrane | 31.38 | 32.52 |
CDY41028 | Canola | nucleus, plastid | 22.29 | 30.65 |
TraesCS2A01G582300.1 | Wheat | nucleus | 35.19 | 29.7 |
TraesCS2B01G604700.1 | Wheat | nucleus | 34.6 | 29.28 |
CDY26692 | Canola | nucleus | 25.81 | 29.04 |
TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 34.31 | 28.89 |
CDY26693 | Canola | plastid | 22.87 | 28.89 |
Zm00001d026652_P001 | Maize | plastid | 33.43 | 28.72 |
TraesCS6B01G447600.1 | Wheat | nucleus | 39.3 | 28.45 |
CDY26694 | Canola | cytosol, plastid | 21.7 | 28.24 |
CDY03203 | Canola | nucleus | 29.62 | 28.21 |
CDY35172 | Canola | nucleus | 29.03 | 28.05 |
CDY41027 | Canola | cytosol | 21.7 | 27.82 |
KXG27470 | Sorghum | nucleus | 33.72 | 27.51 |
CDY52506 | Canola | nucleus | 27.57 | 26.93 |
CDY08882 | Canola | nucleus | 34.31 | 26.9 |
CDX78814 | Canola | nucleus | 31.96 | 26.78 |
Os04t0683900-01 | Rice | nucleus | 32.84 | 26.73 |
CDY37704 | Canola | nucleus | 29.33 | 26.67 |
CDY68252 | Canola | nucleus | 23.17 | 26.6 |
CDX76549 | Canola | nucleus | 34.31 | 26.59 |
TraesCS6A01G403700.1 | Wheat | nucleus | 41.35 | 26.55 |
CDY21122 | Canola | nucleus | 29.91 | 26.42 |
CDY30005 | Canola | nucleus | 29.33 | 26.25 |
CDY01506 | Canola | nucleus | 23.17 | 26.25 |
CDX94457 | Canola | nucleus | 29.03 | 26.19 |
CDY05594 | Canola | nucleus | 27.27 | 26.12 |
Zm00001d001784_P002 | Maize | nucleus | 33.14 | 25.98 |
CDY44500 | Canola | nucleus | 31.96 | 25.95 |
HORVU7Hr1G122340.3 | Barley | nucleus | 26.39 | 25.79 |
CDX92693 | Canola | nucleus | 29.91 | 25.76 |
CDY49703 | Canola | nucleus | 29.91 | 25.56 |
CDY38874 | Canola | nucleus | 31.67 | 25.53 |
CDX89422 | Canola | nucleus | 28.74 | 25.52 |
CDY26691 | Canola | cytosol, plastid | 23.17 | 25.4 |
CDY23720 | Canola | extracellular, plasma membrane, vacuole | 29.62 | 25.38 |
CDY32624 | Canola | nucleus | 31.38 | 25.24 |
CDY00488 | Canola | nucleus | 31.67 | 25.17 |
CDY52477 | Canola | nucleus | 26.98 | 25.0 |
CDY65362 | Canola | nucleus | 27.27 | 25.0 |
CDX99902 | Canola | nucleus | 31.38 | 24.37 |
CDY65097 | Canola | nucleus | 29.91 | 24.34 |
CDX91598 | Canola | nucleus | 29.62 | 24.11 |
CDY16785 | Canola | nucleus | 27.27 | 23.72 |
CDX87241 | Canola | nucleus | 26.98 | 23.53 |
CDX86910 | Canola | nucleus | 26.98 | 23.06 |
CDY00271 | Canola | nucleus | 26.98 | 22.83 |
CDY30710 | Canola | nucleus | 26.1 | 22.19 |
CDY13231 | Canola | nucleus | 25.51 | 21.22 |
Protein Annotations
Gene3D:3.30.1330.80 | MapMan:35.1 | GO:A0A078HFC7 | UniProt:A0A078HFC7 | InterPro:AT_hook_DNA-bd_motif | EnsemblPlants:CDY37070 |
ProteinID:CDY37070 | ProteinID:CDY37070.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
EnsemblPlantsGene:GSBRNA2T00063279001 | InterPro:IPR005175 | PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31500 |
PANTHER:PTHR31500:SF44 | SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI0004EE6879 | SEG:seg | : |
Description
BnaA04g26480DBnaA04g26480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFC7]
Coordinates
chrLK032390:-:275717..277830
Molecular Weight (calculated)
35870.5 Da
IEP (calculated)
10.450
GRAVY (calculated)
-0.432
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQRDPMGLT GSGSYYIQRG LPGSVPPTFH GSSQQQQGLR HLHNPNSPFG SASTGFGSPP LHGDPSPAAA ATGAVPHHVG VHMISPPPPP TSETPMKRKR
101: GRPRKYGQDG SVSLALSSSS VSTINSSNKR GRGRPPGSGK KQRLTSTGEL MIPSSSGMSF TPHVILVSIG EDIASKVIAF SQQGPRAICV LSASGAVSTA
201: TLLQSSTPPG AIQYEGRFEI LALSISYLVP TDGSFRNRTG NLSVSLASPD GRVIGGAIGG PLIAASPVQV IVGSFVWAAP KIKNKKREEE GSENVQDTND
301: HQALDHPVPQ QHTQGQNMMW STGSRQMDMR HAHADIDLMR G
101: GRPRKYGQDG SVSLALSSSS VSTINSSNKR GRGRPPGSGK KQRLTSTGEL MIPSSSGMSF TPHVILVSIG EDIASKVIAF SQQGPRAICV LSASGAVSTA
201: TLLQSSTPPG AIQYEGRFEI LALSISYLVP TDGSFRNRTG NLSVSLASPD GRVIGGAIGG PLIAASPVQV IVGSFVWAAP KIKNKKREEE GSENVQDTND
301: HQALDHPVPQ QHTQGQNMMW STGSRQMDMR HAHADIDLMR G
001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
Arabidopsis Description
AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.