Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G582300.1 | Wheat | nucleus | 95.56 | 95.79 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 93.09 | 93.55 |
| HORVU2Hr1G123730.3 | Barley | plastid | 47.65 | 91.9 |
| Os04t0683900-01 | Rice | nucleus | 71.36 | 68.97 |
| KXG27470 | Sorghum | nucleus | 68.64 | 66.51 |
| Zm00001d026652_P001 | Maize | plastid | 63.95 | 65.24 |
| Zm00001d001784_P002 | Maize | nucleus | 64.2 | 59.77 |
| VIT_15s0046g02930.t01 | Wine grape | nucleus, plastid | 34.32 | 40.29 |
| KRH05193 | Soybean | plastid | 14.32 | 39.46 |
| KRH40471 | Soybean | nucleus | 32.1 | 38.12 |
| KRH00715 | Soybean | nucleus | 31.85 | 37.72 |
| KRH48165 | Soybean | nucleus | 31.6 | 37.65 |
| KRH65066 | Soybean | nucleus | 31.36 | 37.35 |
| VIT_02s0025g03580.t01 | Wine grape | nucleus | 31.85 | 37.28 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 30.62 | 37.24 |
| Solyc08g080960.2.1 | Tomato | nucleus | 29.88 | 36.23 |
| PGSC0003DMT400014926 | Potato | plastid | 30.37 | 35.65 |
| Solyc08g008030.2.1 | Tomato | nucleus | 30.37 | 35.55 |
| KRH27929 | Soybean | nucleus | 30.86 | 35.51 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 17.04 | 35.2 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 29.88 | 34.97 |
| Solyc01g094460.2.1 | Tomato | nucleus | 29.14 | 34.81 |
| PGSC0003DMT400000467 | Potato | nucleus | 28.89 | 34.51 |
| KRH77536 | Soybean | nucleus | 30.37 | 34.45 |
| CDY37070 | Canola | nucleus | 28.89 | 34.31 |
| Bra039309.1-P | Field mustard | nucleus | 28.89 | 34.31 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 27.41 | 34.05 |
| CDY42495 | Canola | nucleus | 28.4 | 34.02 |
| CDY27354 | Canola | nucleus | 29.14 | 33.81 |
| Bra007595.1-P | Field mustard | nucleus | 28.15 | 33.43 |
| AT2G45850.1 | Thale cress | nucleus | 28.64 | 33.33 |
| CDY58791 | Canola | nucleus | 26.91 | 33.23 |
| CDX89109 | Canola | nucleus | 27.41 | 33.13 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 28.89 | 33.05 |
| Bra014444.1-P | Field mustard | nucleus | 27.16 | 33.03 |
| CDY51561 | Canola | nucleus | 27.65 | 32.94 |
| CDX71746 | Canola | nucleus | 27.9 | 32.85 |
| GSMUA_Achr11P... | Banana | nucleus | 30.37 | 32.8 |
| CDY48928 | Canola | nucleus | 27.65 | 32.56 |
| KRH59866 | Soybean | nucleus | 28.15 | 32.39 |
| GSMUA_Achr11P... | Banana | nucleus | 29.63 | 32.34 |
| CDY45364 | Canola | nucleus | 29.14 | 32.15 |
| CDY25500 | Canola | nucleus | 29.14 | 31.89 |
| KRH41165 | Soybean | nucleus | 27.41 | 31.53 |
| AT1G63470.1 | Thale cress | nucleus | 29.38 | 31.48 |
| Bra027801.1-P | Field mustard | nucleus | 29.14 | 31.47 |
| Bra025511.1-P | Field mustard | nucleus | 21.48 | 31.41 |
| PGSC0003DMT400031843 | Potato | plastid | 29.63 | 31.25 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 27.9 | 31.22 |
| TraesCS5D01G274900.1 | Wheat | plastid | 22.47 | 31.06 |
| Bra003446.1-P | Field mustard | nucleus | 25.68 | 30.68 |
| Bra027642.1-P | Field mustard | nucleus | 28.64 | 30.45 |
| TraesCS7D01G247300.2 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 27.65 | 30.27 |
| AT1G63480.1 | Thale cress | nucleus | 26.91 | 30.19 |
| CDY34355 | Canola | nucleus | 28.15 | 30.16 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 29.14 | 28.64 |
| TraesCS5D01G138000.1 | Wheat | plastid | 24.2 | 26.7 |
| CDY39751 | Canola | nucleus | 24.69 | 26.18 |
| CDY46385 | Canola | nucleus | 24.69 | 26.18 |
| TraesCS7D01G312100.1 | Wheat | plastid | 25.43 | 25.94 |
| TraesCS6D01G076900.1 | Wheat | nucleus | 23.21 | 23.74 |
| TraesCS1D01G194900.2 | Wheat | nucleus | 26.42 | 23.57 |
| TraesCS7D01G134100.1 | Wheat | nucleus | 20.25 | 22.65 |
| TraesCS7D01G133700.1 | Wheat | cytosol | 12.59 | 22.17 |
| TraesCS5D01G274800.1 | Wheat | cytosol | 0.99 | 3.42 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G597900.1 | EnsemblPlantsGene:TraesCS2D01G597900 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF19 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:650320135..650322153
Molecular Weight (calculated)
41322.9 Da
IEP (calculated)
10.408
GRAVY (calculated)
-0.459
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGKDLISPS DLPPFYGQQQ QQHLRMLGGT GGGGGQQQHS PSSLAGMHSV IRPMPNMSMS PTAILQSIGG GGASTLAGMQ FNMDGAPSPS SMLQHNSMGG
101: GSVSGSGGTM PVASPPPEPV KRKRGRLRKY GPDGAMKHHM SSSSSSAHHQ QQQHQMMGAP QQRMGSMAGQ GMAGGLDDAA QKKKRGRPPG TGKKLSSPSS
201: KPSGNAFPGS AGTSFTPHII TASPSEDVAG KIAAFASQSP RAVCVLSAMG SISRAVLRHP ADHPPSYNNP AIYEGLYEIL SLSGSYNLNE GQQNQTDGIS
301: VTLCSPERHI IGGVLGGALV AASTVQVVLG TFVQGGSKSK SKKAAKPPAF GPDSLTGAGP DMPSPSSGHN QNLTSPPSVV STGGWPSSGI FDARSSNIDI
401: NSSRG
101: GSVSGSGGTM PVASPPPEPV KRKRGRLRKY GPDGAMKHHM SSSSSSAHHQ QQQHQMMGAP QQRMGSMAGQ GMAGGLDDAA QKKKRGRPPG TGKKLSSPSS
201: KPSGNAFPGS AGTSFTPHII TASPSEDVAG KIAAFASQSP RAVCVLSAMG SISRAVLRHP ADHPPSYNNP AIYEGLYEIL SLSGSYNLNE GQQNQTDGIS
301: VTLCSPERHI IGGVLGGALV AASTVQVVLG TFVQGGSKSK SKKAAKPPAF GPDSLTGAGP DMPSPSSGHN QNLTSPPSVV STGGWPSSGI FDARSSNIDI
401: NSSRG
001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
Arabidopsis Description
AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.