Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 76.88 | 79.88 |
| GSMUA_Achr11P... | Banana | nucleus | 83.24 | 76.8 |
| GSMUA_Achr11P... | Banana | nucleus | 78.03 | 72.78 |
| VIT_15s0046g02930.t01 | Wine grape | nucleus, plastid | 60.69 | 60.87 |
| KRH65066 | Soybean | nucleus | 55.78 | 56.76 |
| KRH48165 | Soybean | nucleus | 55.2 | 56.18 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 31.5 | 55.61 |
| KRH00715 | Soybean | nucleus | 54.91 | 55.56 |
| KRH40471 | Soybean | nucleus | 54.62 | 55.43 |
| VIT_02s0025g03580.t01 | Wine grape | nucleus | 52.89 | 52.89 |
| KRH05193 | Soybean | plastid | 22.25 | 52.38 |
| PGSC0003DMT400000467 | Potato | nucleus | 49.13 | 50.15 |
| Solyc01g094460.2.1 | Tomato | nucleus | 48.84 | 49.85 |
| Solyc08g080960.2.1 | Tomato | nucleus | 46.24 | 47.9 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 44.8 | 47.55 |
| CDY37070 | Canola | nucleus | 46.24 | 46.92 |
| Bra014444.1-P | Field mustard | nucleus | 45.09 | 46.85 |
| AT2G45850.1 | Thale cress | nucleus | 47.11 | 46.84 |
| Bra039309.1-P | Field mustard | nucleus | 45.95 | 46.63 |
| KRH27929 | Soybean | nucleus | 47.11 | 46.31 |
| CDX89109 | Canola | nucleus | 44.51 | 45.97 |
| CDY27354 | Canola | nucleus | 46.24 | 45.85 |
| Solyc08g008030.2.1 | Tomato | nucleus | 45.66 | 45.66 |
| KRH77536 | Soybean | nucleus | 47.11 | 45.66 |
| CDY42495 | Canola | nucleus | 44.51 | 45.56 |
| PGSC0003DMT400014926 | Potato | plastid | 45.38 | 45.51 |
| Bra007595.1-P | Field mustard | nucleus | 44.8 | 45.45 |
| GSMUA_Achr7P20540_001 | Banana | nucleus | 38.44 | 45.39 |
| KRH59866 | Soybean | nucleus | 45.95 | 45.17 |
| CDY58791 | Canola | nucleus | 42.49 | 44.82 |
| Bra025511.1-P | Field mustard | nucleus | 35.84 | 44.77 |
| KRH41165 | Soybean | nucleus | 45.38 | 44.6 |
| CDY48928 | Canola | nucleus | 44.22 | 44.48 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 45.38 | 44.35 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 24.28 | 44.21 |
| CDY51561 | Canola | nucleus | 43.35 | 44.12 |
| CDX71746 | Canola | nucleus | 43.64 | 43.9 |
| CDY25500 | Canola | nucleus | 46.24 | 43.24 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 45.09 | 43.09 |
| Bra027642.1-P | Field mustard | nucleus | 46.53 | 42.26 |
| Bra003446.1-P | Field mustard | nucleus | 41.04 | 41.89 |
| CDY45364 | Canola | nucleus | 44.22 | 41.69 |
| PGSC0003DMT400031843 | Potato | plastid | 46.24 | 41.67 |
| CDY34355 | Canola | nucleus | 45.38 | 41.53 |
| AT1G63470.1 | Thale cress | nucleus | 45.09 | 41.27 |
| Bra027801.1-P | Field mustard | nucleus | 44.22 | 40.8 |
| AT1G63480.1 | Thale cress | nucleus | 42.2 | 40.44 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 38.73 | 39.88 |
| HORVU2Hr1G123730.3 | Barley | plastid | 23.7 | 39.05 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 41.04 | 38.9 |
| GSMUA_Achr2P20250_001 | Banana | cytosol, peroxisome, plastid | 40.75 | 38.42 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 36.99 | 38.1 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 38.73 | 38.07 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 39.31 | 37.78 |
| GSMUA_Achr6P13410_001 | Banana | cytosol, nucleus, peroxisome | 39.6 | 37.43 |
| CDY39751 | Canola | nucleus | 40.46 | 36.65 |
| CDY46385 | Canola | nucleus | 39.6 | 35.86 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 41.91 | 35.63 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 38.73 | 35.17 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 35.55 | 34.45 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 37.28 | 33.77 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 36.99 | 32.82 |
| Zm00001d026652_P001 | Maize | plastid | 36.42 | 31.74 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 37.86 | 31.12 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 35.55 | 30.45 |
| KXG27470 | Sorghum | nucleus | 36.71 | 30.38 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 35.26 | 30.27 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 34.97 | 29.88 |
| Os04t0683900-01 | Rice | nucleus | 36.13 | 29.83 |
| GSMUA_Achr3P03040_001 | Banana | nucleus, peroxisome, plasma membrane | 41.33 | 29.55 |
| Zm00001d001784_P002 | Maize | nucleus | 36.13 | 28.74 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P11400_001 | EnsemblPlants:GSMUA_Achr8T11400_001 | EnsemblPlantsGene:GSMUA_Achr8G11400_001 | Gene3D:3.30.1330.80 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:AT_hook_DNA-bd_motif | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF9 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SMART:SM00384 | SUPFAM:SSF117856 |
| UniParc:UPI0002965AEA | UniProt:M0TPJ3 | MapMan:35.1 | : | : | : |
Description
DNA binding protein, putative [Source:GMGC_GENE;Acc:GSMUA_Achr8G11400_001]
Coordinates
chr8:-:8215877..8219654
Molecular Weight (calculated)
35079.5 Da
IEP (calculated)
9.938
GRAVY (calculated)
-0.212
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGMSGSAYY IAHRAIPGPG AGSQSGFNVA AQPGVRSMPN PGAILTAPSS GVGSMPFQVE SPPAVSSHGG GGGLNEGVSQ TEPVKRKRGR PRKYGPDGNV
101: ALALSPISSS APPSGTGTVS GSASGSGAPT QKRGRGRPPG TGRKQLLASL GEWVVGSAGM GFTPHVITIP VGEDIAAKIM SFSQQGPRAV CILSANGAVS
201: TVTLRQSATS GSTVTYEGRF EILCLSGSYT LMDNGGSRSR AGGLSISLSS PDGRVIGGGV AGSLIAANPV QVIVGSFIYA GSKAKSKVKA SNETGTEPEL
301: EVGDERHMQY AEFPSENVTP PVMAGWPASR QLDMRNAHMD IDLTRG
101: ALALSPISSS APPSGTGTVS GSASGSGAPT QKRGRGRPPG TGRKQLLASL GEWVVGSAGM GFTPHVITIP VGEDIAAKIM SFSQQGPRAV CILSANGAVS
201: TVTLRQSATS GSTVTYEGRF EILCLSGSYT LMDNGGSRSR AGGLSISLSS PDGRVIGGGV AGSLIAANPV QVIVGSFIYA GSKAKSKVKA SNETGTEPEL
301: EVGDERHMQY AEFPSENVTP PVMAGWPASR QLDMRNAHMD IDLTRG
001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
Arabidopsis Description
AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.