Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25500 | Canola | nucleus | 82.8 | 84.59 |
| Bra027642.1-P | Field mustard | nucleus | 83.86 | 83.2 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 79.37 | 82.87 |
| CDY45364 | Canola | nucleus | 79.89 | 82.29 |
| CDY34355 | Canola | nucleus | 82.01 | 82.01 |
| Bra027801.1-P | Field mustard | nucleus | 80.42 | 81.07 |
| AT1G63480.1 | Thale cress | nucleus | 76.45 | 80.06 |
| KRH05193 | Soybean | plastid | 23.02 | 59.18 |
| VIT_02s0025g03580.t01 | Wine grape | nucleus | 50.79 | 55.49 |
| KRH27929 | Soybean | nucleus | 50.0 | 53.69 |
| KRH59866 | Soybean | nucleus | 49.21 | 52.84 |
| KRH77536 | Soybean | nucleus | 48.94 | 51.82 |
| KRH41165 | Soybean | nucleus | 47.88 | 51.42 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 42.86 | 48.65 |
| Solyc08g080960.2.1 | Tomato | nucleus | 42.33 | 47.9 |
| Solyc08g008030.2.1 | Tomato | nucleus | 42.06 | 45.95 |
| PGSC0003DMT400014926 | Potato | plastid | 41.8 | 45.8 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 41.27 | 45.09 |
| GSMUA_Achr11P... | Banana | nucleus | 43.12 | 43.94 |
| GSMUA_Achr11P... | Banana | nucleus | 42.33 | 42.67 |
| PGSC0003DMT400031843 | Potato | plastid | 42.86 | 42.19 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 38.36 | 40.96 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 21.16 | 40.82 |
| AT2G45850.1 | Thale cress | nucleus | 37.57 | 40.8 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 32.01 | 37.12 |
| HORVU2Hr1G123730.3 | Barley | plastid | 20.37 | 36.67 |
| Os02t0824300-01 | Rice | nucleus | 37.83 | 36.29 |
| Zm00001d018515_P002 | Maize | nucleus | 36.77 | 35.82 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 28.57 | 35.18 |
| OQU85994 | Sorghum | nucleus | 36.77 | 34.66 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 35.98 | 34.0 |
| AT4G00200.2 | Thale cress | nucleus | 27.51 | 32.7 |
| AT2G33620.2 | Thale cress | nucleus | 29.89 | 32.19 |
| AT4G22770.1 | Thale cress | nucleus | 28.31 | 32.04 |
| AT4G12080.1 | Thale cress | nucleus | 29.63 | 31.46 |
| Os04t0683900-01 | Rice | nucleus | 33.33 | 30.07 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 32.01 | 29.95 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 31.75 | 29.78 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 31.48 | 29.38 |
| Zm00001d026652_P001 | Maize | plastid | 30.16 | 28.72 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 35.45 | 28.45 |
| KXG27470 | Sorghum | nucleus | 31.22 | 28.23 |
| AT5G46640.1 | Thale cress | nucleus | 28.31 | 27.72 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 37.57 | 26.74 |
| AT4G17950.1 | Thale cress | nucleus | 30.69 | 26.42 |
| AT5G28590.1 | Thale cress | mitochondrion | 14.81 | 25.93 |
| Zm00001d001784_P002 | Maize | nucleus | 29.37 | 25.52 |
| AT5G51590.1 | Thale cress | nucleus | 27.78 | 25.06 |
| HORVU7Hr1G122340.3 | Barley | nucleus | 23.02 | 24.93 |
| AT3G04590.2 | Thale cress | nucleus | 26.19 | 24.09 |
| AT4G25320.1 | Thale cress | nucleus | 25.66 | 24.01 |
| AT5G62260.3 | Thale cress | nucleus | 25.4 | 23.76 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:842653 | ProteinID:AAF19697.1 | ProteinID:AEE34103.1 | EMBL:AK118329 |
| ArrayExpress:AT1G63470 | EnsemblPlantsGene:AT1G63470 | RefSeq:AT1G63470 | TAIR:AT1G63470 | RefSeq:AT1G63470-TAIR-G | EnsemblPlants:AT1G63470.1 |
| TAIR:AT1G63470.1 | InterPro:AT_hook_DNA-bd_motif | Unigene:At.36125 | Unigene:At.73033 | EMBL:BR000341 | EMBL:BT005545 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005175 | RefSeq:NP_176536.2 |
| PFAM:PF03479 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF9 | UniProt:Q8GXB3 |
| SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI000000C69D | SEG:seg | : | : |
Description
AHL5AT-hook motif nuclear-localized protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB3]
Coordinates
chr1:-:23536466..23539242
Molecular Weight (calculated)
39646.1 Da
IEP (calculated)
10.437
GRAVY (calculated)
-0.493
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGREAMAFP GSHSQFYLQR GVFTNLTPSQ VASGLHAPPP PPGMRPMSNP NIHHPQASNP GPPFSMAEHR HSDFGHSIHM GMASPAAVQP TLQLPPPPSE
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.