Factsheet for Os02t0824300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0675000-01
Os01t0760300-01
Os02t0125200-00
Os02t0824300-01
Os04t0589900-01
Os04t0683900-01
Os05t0560100-01
Os06t0152100-01
Os10t0323600-01
Os10t0323900-01
Os10t0572900-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63480.1	Os02t0824300-01	AT3G61310.1	21798944
AT1G63480.1	Os04t0683900-01	AT3G61310.1	21798944
AT1G63480.1	Os06t0152100-01	AT5G56600.1	21798944
AT1G63480.1	Os10t0323600-01	AT5G56600.1	21798944
AT1G63480.1	Os10t0323900-01	AT5G56600.1	21798944
AT2G45850.1	Os02t0125200-00	AT4G12080.1	21798944
AT2G45850.1	Os04t0589900-01	AT4G17950.1	21798944
AT2G45850.1	Os10t0572900-02	AT4G17950.1	21798944
AT3G61310.1	Os01t0675000-01	AT1G52240.1	21798944
AT3G61310.1	Os01t0760300-01	AT1G52240.1	21798944
AT3G61310.1	Os05t0560100-01	AT1G52240.1	21798944
AT3G61310.1	Os02t0824300-01	AT2G45850.1	21798944
AT3G61310.1	Os04t0683900-01	AT2G45850.1	21798944
AT3G61310.1	Os02t0824300-01	AT3G61310.1	21798944
AT3G61310.1	Os04t0683900-01	AT3G61310.1	21798944
AT3G61310.1	Os02t0125200-00	AT4G12080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85994	Sorghum	nucleus	84.26	82.79
Zm00001d018515_P002	Maize	nucleus	81.22	82.47
Zm00001d051861_P001	Maize	endoplasmic reticulum, nucleus, plastid	78.68	77.5
TraesCS6B01G447600.1	Wheat	nucleus	73.86	61.78
TraesCS6A01G403700.1	Wheat	nucleus	80.71	59.89
VIT_15s0046g02930.t01	Wine grape	nucleus, plastid	42.64	48.7
VIT_02s0025g03580.t01	Wine grape	nucleus	41.12	46.82
Solyc01g094460.2.1	Tomato	nucleus	39.59	46.02
PGSC0003DMT400000467	Potato	nucleus	39.59	46.02
KRH05193	Soybean	plastid	17.01	45.58
KRH40471	Soybean	nucleus	39.34	45.45
KRH00715	Soybean	nucleus	38.83	44.74
KRH65066	Soybean	nucleus	38.58	44.71
KRH48165	Soybean	nucleus	37.82	43.82
Solyc08g080960.2.1	Tomato	nucleus	36.8	43.41
HORVU7Hr1G122340.3	Barley	nucleus	38.07	42.98
PGSC0003DMT400014926	Potato	plastid	37.56	42.9
Solyc08g008030.2.1	Tomato	nucleus	37.31	42.49
KRH27929	Soybean	nucleus	37.31	41.76
KRH77536	Soybean	nucleus	37.31	41.18
Bra014444.1-P	Field mustard	nucleus	34.77	41.14
CDY51561	Canola	nucleus	35.03	40.59
CDY42495	Canola	nucleus	34.77	40.53
AT2G45850.1	Thale cress	nucleus	35.79	40.52
CDX89109	Canola	nucleus	34.26	40.3
CDY58791	Canola	nucleus	33.25	39.94
CDY37070	Canola	nucleus	34.26	39.59
Bra039309.1-P	Field mustard	nucleus	34.26	39.59
Os10t0572900-02	Rice	nucleus	24.87	39.04
Bra025511.1-P	Field mustard	nucleus	27.41	38.99
CDY27354	Canola	nucleus	34.52	38.97
CDY48928	Canola	nucleus	34.01	38.95
CDY25500	Canola	nucleus	36.55	38.92
Bra007595.1-P	Field mustard	nucleus	33.5	38.71
CDX71746	Canola	nucleus	33.76	38.66
KRH59866	Soybean	nucleus	34.26	38.35
Bra027642.1-P	Field mustard	nucleus	37.06	38.32
CDY64088	Canola	nucleus, plasma membrane, plastid	35.03	38.12
KRH41165	Soybean	nucleus	34.01	38.07
AT3G61310.1	Thale cress	nucleus, plastid	34.01	37.85
AT1G63470.1	Thale cress	nucleus	36.29	37.83
CDY45364	Canola	nucleus	35.03	37.6
CDY34355	Canola	nucleus	36.04	37.57
Bra027801.1-P	Field mustard	nucleus	35.28	37.07
PGSC0003DMT400031843	Potato	plastid	36.04	36.98
Bra003446.1-P	Field mustard	nucleus	31.47	36.58
Os04t0589900-01	Rice	nucleus	34.77	36.15
AT1G63480.1	Thale cress	nucleus	32.99	36.01
Os09t0491708-01	Rice	nucleus	32.74	35.93
Os08t0512400-02	Rice	nucleus	31.47	35.03
CDY39751	Canola	nucleus	32.23	33.25
CDY46385	Canola	nucleus	31.73	32.72
Os04t0683900-01	Rice	nucleus	32.74	30.79
Os11t0149100-01	Rice	cytosol, nucleus, peroxisome	28.43	30.6
Os08t0118000-01	Rice	nucleus	28.43	30.11
Os12t0147000-00	Rice	nucleus	28.68	29.66
Os06t0326000-01	Rice	nucleus	28.43	29.63
Os02t0125200-00	Rice	mitochondrion	23.86	25.61

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	EntrezGene:4331204	InterPro:AT_hook_DNA-bd_motif	ProteinID:BAD22863.1	ProteinID:BAD22931.1
ProteinID:BAF10488.1	ProteinID:BAS81668.1	ProteinID:EAZ25141.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:IPR005175	EnsemblPlantsGene:Os02g0824300	EnsemblPlants:Os02t0824300-01	PFAM:PF03479	InterPro:PPC_dom
PRINTS:PR00929	PFscan:PS51742	PANTHER:PTHR31500	PANTHER:PTHR31500:SF41	UniProt:Q6K9W5	SMART:SM00384
SUPFAM:SSF117856	UniParc:UPI00003B0475	RefSeq:XP_015627505.1	SEG:seg	:	:

Description

Protein of unknown function DUF296 domain containing protein. (Os02t0824300-01)

Coordinates

chr2:-:35415323..35419464

Molecular Weight (calculated)

40031.0 Da

IEP (calculated)

7.500

GRAVY (calculated)

-0.372

Length

394 amino acids

Sequence
(BLAST)

001: MDGRESTVAS GSNFSSFYVQ HRGIGVPGGS GHPAGLHGPP PGGYRQHLDA VSAGYPFQPP HIGGSHIGQG YHHVDASAPV AQHGSGGGGG GMDIGMGVEM
101: SADAKGDQGS GAGQDEPVKK KRGRPRKYKP DGAVTLGLSP SSSTPHSSTS AMGTMVTTPG SGFGSGAGSG GSGSGALTEK RGRGRPPGSG KMQQLASLGK
201: WFLGSVGTGF TPHVIIISPG EDVAARIMSF SQQGPRAVCI ISATGAVSTA TLHQDSNSGG VVTYEGRFEI LCLSGSYLVI EEGGSRTRSG GLCIALCGPD
301: HRVIGGSVGG VLTAAGTVQV IVGSFMYGGT KKNKAKAEQE TENNEEPIGG EEETPTMALP DHNMPHHTMG GWSAGLMRQM DSRTPNIDIN SIRE

Best Arabidopsis Sequence Match ( AT1G63470.1 )
(BLAST)

001: MDGREAMAFP GSHSQFYLQR GVFTNLTPSQ VASGLHAPPP PPGMRPMSNP NIHHPQASNP GPPFSMAEHR HSDFGHSIHM GMASPAAVQP TLQLPPPPSE
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG

Arabidopsis Description

AHL5AT-hook motif nuclear-localized protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.