Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- vacuole 1
- plastid 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
nucleus:
19621931
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
OQU76344 | Sorghum | nucleus | 49.74 | 51.93 |
Zm00001d037425_P001 | Maize | nucleus | 47.88 | 50.7 |
GSMUA_Achr3P03710_001 | Banana | nucleus | 47.09 | 48.77 |
GSMUA_Achr6P03420_001 | Banana | nucleus | 44.44 | 46.67 |
CDX84679 | Canola | nucleus | 32.28 | 46.56 |
VIT_18s0122g00700.t01 | Wine grape | nucleus | 43.39 | 46.46 |
Bra022946.1-P | Field mustard | nucleus | 32.01 | 46.18 |
CDX79537 | Canola | mitochondrion, nucleus, plastid | 32.01 | 46.18 |
Os09t0491708-01 | Rice | nucleus | 42.86 | 45.13 |
Os10t0572900-02 | Rice | nucleus | 29.63 | 44.62 |
Os08t0512400-02 | Rice | nucleus | 40.74 | 43.5 |
GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 46.83 | 43.49 |
Bra021865.1-P | Field mustard | nucleus | 38.62 | 41.71 |
AT2G33620.2 | Thale cress | nucleus | 38.1 | 41.03 |
PGSC0003DMT400075370 | Potato | nucleus | 38.62 | 40.78 |
Solyc12g094710.1.1 | Tomato | nucleus | 37.57 | 39.78 |
CDY37704 | Canola | nucleus | 38.36 | 38.67 |
TraesCS7B01G035400.1 | Wheat | cytosol | 20.37 | 38.5 |
GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 42.59 | 38.24 |
TraesCS7A01G134300.1 | Wheat | cytosol | 19.58 | 37.56 |
KRH60876 | Soybean | nucleus | 34.92 | 36.97 |
CDY23720 | Canola | extracellular, plasma membrane, vacuole | 38.89 | 36.93 |
KRH51558 | Soybean | nucleus | 34.39 | 36.62 |
Os04t0589900-01 | Rice | nucleus | 34.13 | 34.04 |
TraesCS7D01G133700.1 | Wheat | cytosol | 20.63 | 33.91 |
HORVU7Hr1G027950.1 | Barley | extracellular, mitochondrion, plasma membrane | 21.16 | 33.76 |
TraesCS7D01G134100.1 | Wheat | nucleus | 28.84 | 30.11 |
Os08t0118000-01 | Rice | nucleus | 29.63 | 30.11 |
TraesCS7B01G035900.1 | Wheat | nucleus | 28.57 | 29.75 |
Os11t0149100-01 | Rice | cytosol, nucleus, peroxisome | 28.31 | 29.23 |
Os12t0147000-00 | Rice | nucleus | 28.84 | 28.61 |
HORVU7Hr1G028110.15 | Barley | plasma membrane | 28.04 | 28.57 |
Os02t0824300-01 | Rice | nucleus | 29.63 | 28.43 |
Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 13.76 | 27.08 |
Os02t0125200-00 | Rice | mitochondrion | 25.66 | 26.43 |
PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 22.75 | 26.38 |
Os04t0683900-01 | Rice | nucleus | 26.45 | 23.87 |
Protein Annotations
Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:4340908 | InterPro:AT_hook_DNA-bd_motif | ProteinID:BAD33241.1 | ProteinID:BAF19441.1 |
ProteinID:BAS97529.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:IPR005175 |
EnsemblPlantsGene:Os06g0326000 | EnsemblPlants:Os06t0326000-01 | PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31500 |
PANTHER:PTHR31500:SF0 | UniProt:Q69T83 | SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI00003FF33B | RefSeq:XP_015641570.1 |
SEG:seg | : | : | : | : | : |
Description
Protein of unknown function DUF296 domain containing protein. (Os06t0326000-01)
Coordinates
chr6:-:12758542..12763661
Molecular Weight (calculated)
37452.3 Da
IEP (calculated)
11.058
GRAVY (calculated)
-0.224
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGGAMSAAA TATASEAAAY GGVGMSKSGA LQPQPPHGAA AAVRLAYTHD GIAVYKHTPP PPVYQTPAAV AAPSPPVRGN GGAPASAEQH KRKRGRPRKY
101: AVTDVPLAVV PPSPPKAAAA AGASAAQSPA TPTLPPGFSS GLAAYGGAAA SQPAPRQAPP ASGRVLPHKK RGRPPGSGNK QQQRPQHKKA AAPGSSVIGL
201: KPSVITVQVG EDVVSRVMSF TKNGWAVCVL SANGAVSNMT LRQAGSSGAT TVNYEGHFEI LSLSGSYLLS ESVGLSSRAG GLSVSLAGPD GRVLGGGVAG
301: PLNAATPVQV VIGSFLADVK KGHKQAMPSG APYPGVSTPT SRGTPSGSSG GPGSPLNQSA SGSFNTSNQQ ALADFPWR
101: AVTDVPLAVV PPSPPKAAAA AGASAAQSPA TPTLPPGFSS GLAAYGGAAA SQPAPRQAPP ASGRVLPHKK RGRPPGSGNK QQQRPQHKKA AAPGSSVIGL
201: KPSVITVQVG EDVVSRVMSF TKNGWAVCVL SANGAVSNMT LRQAGSSGAT TVNYEGHFEI LSLSGSYLLS ESVGLSSRAG GLSVSLAGPD GRVLGGGVAG
301: PLNAATPVQV VIGSFLADVK KGHKQAMPSG APYPGVSTPT SRGTPSGSSG GPGSPLNQSA SGSFNTSNQQ ALADFPWR
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.