Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU76344 | Sorghum | nucleus | 87.96 | 86.74 |
| Bra022946.1-P | Field mustard | nucleus | 36.69 | 50.0 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 36.69 | 50.0 |
| CDX84679 | Canola | nucleus | 36.69 | 50.0 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 48.18 | 48.73 |
| Os06t0326000-01 | Rice | nucleus | 50.7 | 47.88 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 48.46 | 47.4 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 46.78 | 46.39 |
| Zm00001d020951_P002 | Maize | cytosol, nucleus, peroxisome, plastid | 43.14 | 45.97 |
| AT2G33620.2 | Thale cress | nucleus | 42.58 | 43.3 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 48.18 | 42.26 |
| Zm00001d052901_P002 | Maize | nucleus | 43.42 | 42.01 |
| PGSC0003DMT400075370 | Potato | nucleus | 42.02 | 41.9 |
| Solyc12g094710.1.1 | Tomato | nucleus | 41.74 | 41.74 |
| Bra021865.1-P | Field mustard | nucleus | 39.5 | 40.29 |
| Zm00001d006034_P003 | Maize | nucleus | 47.62 | 39.53 |
| KRH51558 | Soybean | nucleus | 38.94 | 39.15 |
| KRH60876 | Soybean | nucleus | 38.66 | 38.66 |
| CDY37704 | Canola | nucleus | 39.78 | 37.87 |
| Zm00001d031481_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 43.7 | 37.86 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 44.26 | 37.53 |
| TraesCS7B01G035400.1 | Wheat | cytosol | 20.73 | 37.0 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 40.06 | 35.93 |
| TraesCS7A01G134300.1 | Wheat | cytosol | 19.61 | 35.53 |
| Zm00001d030053_P003 | Maize | plastid | 39.5 | 33.81 |
| Zm00001d015090_P001 | Maize | extracellular | 24.65 | 33.21 |
| HORVU7Hr1G027950.1 | Barley | extracellular, mitochondrion, plasma membrane | 21.85 | 32.91 |
| Zm00001d047042_P004 | Maize | cytosol, nucleus, plasma membrane | 39.5 | 32.87 |
| Zm00001d026036_P001 | Maize | nucleus | 36.69 | 32.59 |
| TraesCS7D01G133700.1 | Wheat | cytosol | 20.17 | 31.3 |
| Zm00001d004924_P001 | Maize | cytosol | 31.09 | 31.01 |
| TraesCS7D01G134100.1 | Wheat | nucleus | 31.37 | 30.94 |
| Zm00001d052495_P001 | Maize | cytosol, nucleus, peroxisome | 30.53 | 30.88 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 33.05 | 30.18 |
| TraesCS7B01G035900.1 | Wheat | nucleus | 30.53 | 30.03 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 26.33 | 28.83 |
| Zm00001d018515_P002 | Maize | nucleus | 31.09 | 28.61 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 15.13 | 28.12 |
| HORVU7Hr1G028110.15 | Barley | plasma membrane | 28.85 | 27.76 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 31.09 | 27.75 |
| Zm00001d026652_P001 | Maize | plastid | 28.85 | 25.94 |
| Zm00001d001784_P002 | Maize | nucleus | 29.13 | 23.91 |
| Zm00001d020950_P001 | Maize | cytosol | 0.56 | 1.71 |
Protein Annotations
| EMBL:BT061016 | EnsemblPlants:Zm00001d037425_P001 | EnsemblPlants:Zm00001d037425_T001 | EnsemblPlantsGene:Zm00001d037425 | EntrezGene:100282121 | Gene3D:3.30.1330.80 |
| InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF42 | PFAM:PF03479 | PFscan:PS51742 |
| ProteinID:AQK83962.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI000194853B | UniProt:C0HFB0 | MapMan:35.1 |
Description
AT-hook motif nuclear-localized protein 10
Coordinates
chr6:-:125123487..125128075
Molecular Weight (calculated)
36239.3 Da
IEP (calculated)
9.906
GRAVY (calculated)
-0.339
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAMAAAGEA EYGECVQKGS LQQHQAPQPS PGALFYTHDG VAVYRNPVMP AFYQQPAGSN VVVPAAPGPA HSPASSEPFK RKRGRPRKYA PADGAVPLAI
101: VPPSQPPTAR APATSEASPT VPPGFSPSPQ SGGVVSRQAS PAPAPASGAP DVKKRGRPSG PSSKKQQPQA AAPGPGWTGL KPHIFTVQAG EDVASRAMSF
201: SGNGWAVCIL TANGTVSNVT LRQGESSGGT VTYEGRFEIL SLAGSYLLSE STGMSSRTGG LSVSLASPDG HVLGGAVAGP LTAASPVQVV IGSFLADTKM
301: ELDPGSAPEK HVFSRFQTTS SPSRGTESSG GHASPPNTTG SFSTSTQPGF PSFPTWK
101: VPPSQPPTAR APATSEASPT VPPGFSPSPQ SGGVVSRQAS PAPAPASGAP DVKKRGRPSG PSSKKQQPQA AAPGPGWTGL KPHIFTVQAG EDVASRAMSF
201: SGNGWAVCIL TANGTVSNVT LRQGESSGGT VTYEGRFEIL SLAGSYLLSE STGMSSRTGG LSVSLASPDG HVLGGAVAGP LTAASPVQVV IGSFLADTKM
301: ELDPGSAPEK HVFSRFQTTS SPSRGTESSG GHASPPNTTG SFSTSTQPGF PSFPTWK
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.