Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84679 | Canola | nucleus | 98.09 | 98.09 |
| Bra022946.1-P | Field mustard | nucleus | 97.33 | 97.33 |
| AT2G33620.2 | Thale cress | nucleus | 78.24 | 58.4 |
| CDY37704 | Canola | nucleus | 82.44 | 57.6 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 82.44 | 54.27 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 65.27 | 48.44 |
| GSMUA_Achr7P20540_001 | Banana | nucleus | 50.76 | 45.39 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 61.45 | 44.72 |
| Os08t0512400-02 | Rice | nucleus | 60.31 | 44.63 |
| Os09t0491708-01 | Rice | nucleus | 60.31 | 44.01 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 60.31 | 43.29 |
| KXG25625 | Sorghum | nucleus | 61.45 | 43.16 |
| TraesCS7B01G143000.1 | Wheat | nucleus | 57.63 | 41.83 |
| PGSC0003DMT400075370 | Potato | nucleus | 56.87 | 41.62 |
| HORVU7Hr1G051150.4 | Barley | nucleus | 57.63 | 41.14 |
| Solyc12g094710.1.1 | Tomato | nucleus | 55.73 | 40.9 |
| TraesCS7D01G247300.2 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 57.63 | 40.81 |
| TraesCS7A01G248500.1 | Wheat | nucleus | 57.63 | 40.81 |
| OQU89696 | Sorghum | nucleus | 59.16 | 40.68 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 62.6 | 40.29 |
| Zm00001d052901_P002 | Maize | nucleus | 55.73 | 39.57 |
| Zm00001d031481_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 60.31 | 38.35 |
| KRH51558 | Soybean | nucleus | 51.53 | 38.03 |
| KRH60876 | Soybean | nucleus | 51.53 | 37.82 |
| Zm00001d037425_P001 | Maize | nucleus | 50.0 | 36.69 |
| CDY01503 | Canola | cytosol | 36.26 | 36.68 |
| CDY07239 | Canola | plasma membrane | 32.06 | 36.36 |
| OQU76344 | Sorghum | nucleus | 50.0 | 36.19 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 57.25 | 35.63 |
| HORVU5Hr1G073550.1 | Barley | nucleus, peroxisome, plastid | 52.67 | 35.2 |
| Zm00001d006034_P003 | Maize | nucleus | 57.25 | 34.88 |
| CDY47428 | Canola | nucleus | 39.31 | 33.33 |
| CDY04392 | Canola | nucleus | 33.59 | 32.84 |
| Os06t0326000-01 | Rice | nucleus | 46.18 | 32.01 |
| CDY07238 | Canola | nucleus | 38.17 | 31.65 |
| CDY41291 | Canola | nucleus | 36.64 | 31.48 |
| CDY35172 | Canola | nucleus | 41.6 | 30.88 |
| CDY03203 | Canola | nucleus | 41.98 | 30.73 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 38.55 | 30.7 |
| CDX98767 | Canola | nucleus | 38.55 | 30.7 |
| CDY37070 | Canola | nucleus | 39.69 | 30.5 |
| CDX82971 | Canola | plastid | 24.81 | 30.23 |
| CDY27354 | Canola | nucleus | 40.08 | 30.09 |
| CDX78814 | Canola | nucleus | 46.56 | 29.98 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 21.76 | 29.69 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 40.84 | 29.56 |
| CDY41027 | Canola | cytosol | 29.77 | 29.32 |
| CDY42495 | Canola | nucleus | 37.79 | 29.29 |
| CDX89109 | Canola | nucleus | 37.4 | 29.25 |
| CDY45364 | Canola | nucleus | 40.84 | 29.16 |
| CDY25500 | Canola | nucleus | 40.84 | 28.92 |
| CDY48928 | Canola | nucleus | 37.79 | 28.78 |
| CDX71746 | Canola | nucleus | 37.79 | 28.78 |
| CDY44500 | Canola | nucleus | 45.8 | 28.57 |
| CDY26694 | Canola | cytosol, plastid | 28.24 | 28.24 |
| CDY34355 | Canola | nucleus | 40.46 | 28.04 |
| CDY41028 | Canola | nucleus, plastid | 26.34 | 27.82 |
| CDY08882 | Canola | nucleus | 46.18 | 27.82 |
| CDY58791 | Canola | nucleus | 34.73 | 27.74 |
| CDX76549 | Canola | nucleus | 46.18 | 27.5 |
| CDY26693 | Canola | plastid | 28.24 | 27.41 |
| CDY26692 | Canola | nucleus | 31.68 | 27.39 |
| CDX89422 | Canola | nucleus | 40.08 | 27.34 |
| CDX94457 | Canola | nucleus | 39.31 | 27.25 |
| CDY01506 | Canola | nucleus | 31.3 | 27.24 |
| CDX92693 | Canola | nucleus | 40.84 | 27.02 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 33.59 | 26.99 |
| CDY68252 | Canola | nucleus | 30.53 | 26.94 |
| CDY49703 | Canola | nucleus | 40.84 | 26.82 |
| CDY51561 | Canola | nucleus | 34.73 | 26.76 |
| TraesCS7A01G134300.1 | Wheat | cytosol | 19.85 | 26.4 |
| CDY38874 | Canola | nucleus | 42.37 | 26.24 |
| CDY32624 | Canola | nucleus | 41.98 | 25.94 |
| CDY00488 | Canola | nucleus | 42.37 | 25.87 |
| CDX91598 | Canola | nucleus | 40.84 | 25.54 |
| CDY65097 | Canola | nucleus | 40.84 | 25.54 |
| TraesCS7B01G035400.1 | Wheat | cytosol | 19.47 | 25.5 |
| CDY26691 | Canola | cytosol, plastid | 30.15 | 25.4 |
| CDX99902 | Canola | nucleus | 41.98 | 25.06 |
| CDY16785 | Canola | nucleus | 37.4 | 25.0 |
| CDX86910 | Canola | nucleus | 37.79 | 24.81 |
| CDX87241 | Canola | nucleus | 36.64 | 24.55 |
| HORVU7Hr1G027950.1 | Barley | extracellular, mitochondrion, plasma membrane | 22.14 | 24.47 |
| TraesCS7B01G035900.1 | Wheat | nucleus | 33.59 | 24.24 |
| CDY00271 | Canola | nucleus | 37.02 | 24.07 |
| CDY52506 | Canola | nucleus | 32.06 | 24.07 |
| TraesCS7D01G134100.1 | Wheat | nucleus | 33.21 | 24.03 |
| CDY65362 | Canola | nucleus | 33.97 | 23.92 |
| CDY52477 | Canola | nucleus | 33.59 | 23.91 |
| CDY05594 | Canola | nucleus | 32.44 | 23.88 |
| CDY21122 | Canola | nucleus | 34.73 | 23.58 |
| CDY39751 | Canola | nucleus | 34.35 | 23.56 |
| CDY46385 | Canola | nucleus | 34.35 | 23.56 |
| CDY30710 | Canola | nucleus | 35.88 | 23.44 |
| CDY30005 | Canola | nucleus | 33.59 | 23.1 |
| TraesCS7D01G133700.1 | Wheat | cytosol | 20.23 | 23.04 |
| HORVU7Hr1G028110.15 | Barley | plasma membrane | 30.15 | 21.29 |
| CDY13231 | Canola | nucleus | 32.06 | 20.49 |
Protein Annotations
| EnsemblPlants:CDX79537 | EnsemblPlantsGene:GSBRNA2T00132288001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF0 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDX79537 | ProteinID:CDX79537.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EDBC10 | MapMan:35.1 | : | : | : |
Description
BnaC03g18730D
Coordinates
chrLK031818:+:589862..592370
Molecular Weight (calculated)
26999.3 Da
IEP (calculated)
11.204
GRAVY (calculated)
-0.290
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMPVTMTGS EPVKKRRGRP RKYGPELGLV PGAPTFTQAQ TSGGGSGEGG SSTQKRMRGR PRGSSNRKKL QALGSTGVGF VPHVLTVGTG EDVSSKIMAF
101: SQNGPRTVCV LSANGAISNV TLRQFATSGG TVTYEGRFEI LSLSGSFLLV ENNGHRSRTG GLSVALSAPD GHVLGGCVAG LLIAASPVQI VVGSFIPEGQ
201: KELASPTLLP RVAPSQVLMN PSSPQSRGAM SESSIGGHGS PLQQSNTGGP YNNTNNPSMP WK
101: SQNGPRTVCV LSANGAISNV TLRQFATSGG TVTYEGRFEI LSLSGSFLLV ENNGHRSRTG GLSVALSAPD GHVLGGCVAG LLIAASPVQI VVGSFIPEGQ
201: KELASPTLLP RVAPSQVLMN PSSPQSRGAM SESSIGGHGS PLQQSNTGGP YNNTNNPSMP WK
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.