Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020612.1-P | Field mustard | nucleus | 97.13 | 96.31 |
| CDY05594 | Canola | nucleus | 91.98 | 90.17 |
| CDY52477 | Canola | nucleus | 82.81 | 78.53 |
| CDY65362 | Canola | nucleus | 83.09 | 77.96 |
| AT5G28590.1 | Thale cress | mitochondrion | 45.56 | 73.61 |
| CDY13231 | Canola | nucleus | 73.64 | 62.68 |
| CDY21122 | Canola | nucleus | 65.33 | 59.07 |
| CDY30005 | Canola | nucleus | 63.61 | 58.27 |
| KRH68809 | Soybean | nucleus | 47.28 | 47.69 |
| VIT_14s0081g00620.t01 | Wine grape | nucleus | 47.28 | 46.22 |
| KRG97062 | Soybean | nucleus | 47.56 | 45.98 |
| PGSC0003DMT400073848 | Potato | nucleus | 42.69 | 45.15 |
| Solyc11g006190.1.1 | Tomato | nucleus | 42.41 | 43.92 |
| CDX84679 | Canola | nucleus | 24.07 | 32.06 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 24.07 | 32.06 |
| CDY26693 | Canola | plastid | 22.35 | 28.89 |
| CDY07239 | Canola | plasma membrane | 18.91 | 28.57 |
| CDY01503 | Canola | cytosol | 21.2 | 28.57 |
| CDY41027 | Canola | cytosol | 21.49 | 28.2 |
| CDX71746 | Canola | nucleus | 27.51 | 27.91 |
| CDY48928 | Canola | nucleus | 27.22 | 27.62 |
| CDY37070 | Canola | nucleus | 26.93 | 27.57 |
| CDY42495 | Canola | nucleus | 26.36 | 27.22 |
| CDX89109 | Canola | nucleus | 26.07 | 27.16 |
| CDY26694 | Canola | cytosol, plastid | 20.06 | 26.72 |
| CDY27354 | Canola | nucleus | 26.65 | 26.65 |
| CDY41028 | Canola | nucleus, plastid | 18.91 | 26.61 |
| CDY07238 | Canola | nucleus | 24.07 | 26.58 |
| CDY68252 | Canola | nucleus | 22.35 | 26.26 |
| CDY25500 | Canola | nucleus | 27.79 | 26.22 |
| CDY26692 | Canola | nucleus | 22.64 | 26.07 |
| CDY47428 | Canola | nucleus | 22.92 | 25.89 |
| CDY58791 | Canola | nucleus | 24.07 | 25.61 |
| CDY51561 | Canola | nucleus | 24.64 | 25.29 |
| CDY34355 | Canola | nucleus | 26.93 | 24.87 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 25.79 | 24.86 |
| CDY45364 | Canola | nucleus | 26.07 | 24.8 |
| CDY04392 | Canola | nucleus | 18.91 | 24.63 |
| CDX98767 | Canola | nucleus | 23.21 | 24.62 |
| CDY01506 | Canola | nucleus | 21.2 | 24.58 |
| CDY26691 | Canola | cytosol, plastid | 21.78 | 24.44 |
| CDX94457 | Canola | nucleus | 26.36 | 24.34 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 22.92 | 24.32 |
| CDX92693 | Canola | nucleus | 27.51 | 24.24 |
| CDY49703 | Canola | nucleus | 27.51 | 24.06 |
| CDY41291 | Canola | nucleus | 20.92 | 23.93 |
| CDX89422 | Canola | nucleus | 26.07 | 23.7 |
| CDY35172 | Canola | nucleus | 23.21 | 22.95 |
| CDY03203 | Canola | nucleus | 23.21 | 22.63 |
| CDY37704 | Canola | nucleus | 24.07 | 22.4 |
| CDX78814 | Canola | nucleus | 26.07 | 22.36 |
| CDY46385 | Canola | nucleus | 24.36 | 22.25 |
| CDY39751 | Canola | nucleus | 24.36 | 22.25 |
| CDX82971 | Canola | plastid | 13.47 | 21.86 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 24.93 | 21.86 |
| CDX87241 | Canola | nucleus | 24.36 | 21.74 |
| CDY16785 | Canola | nucleus | 24.36 | 21.68 |
| CDY38874 | Canola | nucleus | 26.07 | 21.51 |
| CDY44500 | Canola | nucleus | 25.5 | 21.19 |
| CDY32624 | Canola | nucleus | 25.5 | 20.99 |
| CDY30710 | Canola | nucleus | 24.07 | 20.95 |
| CDX99902 | Canola | nucleus | 25.79 | 20.5 |
| CDY08882 | Canola | nucleus | 25.5 | 20.46 |
| CDX76549 | Canola | nucleus | 25.79 | 20.45 |
| CDX86910 | Canola | nucleus | 23.21 | 20.3 |
| CDY00488 | Canola | nucleus | 24.93 | 20.28 |
| CDY00271 | Canola | nucleus | 23.21 | 20.1 |
| CDY65097 | Canola | nucleus | 24.07 | 20.05 |
| CDX91598 | Canola | nucleus | 23.78 | 19.81 |
Protein Annotations
| EnsemblPlants:CDY52506 | EnsemblPlantsGene:GSBRNA2T00007183001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF22 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY52506 | ProteinID:CDY52506.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EE0F86 | UniProt:A0A078IRK5 | MapMan:35.1 | : | : |
Description
BnaAnng11530DBnaAnng11530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRK5]
Coordinates
chrLK033097:-:65678..68208
Molecular Weight (calculated)
36575.3 Da
IEP (calculated)
8.210
GRAVY (calculated)
-0.722
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPNERHHHH HHHQEHHLTS PYYHPFHHHT PTTVSAAPSD NGNFPPPPID GSSSSYHHSA PSSAPIEPVK RKRGRPRKYD TPAQALAAKK LASSASSSSA
101: REKREQTAAA AGVSPPSKPG SKKSLSGSSG KSGQSFTPHI VNITPGEDVA QKIIHFAEQS KHELCILSAS GTISDASLSH LATGTSASYQ GQYEILSLSG
201: SYIRGEHGGK TGGLSVCLSS SDGQIVGGGV GGPLKAAGPV QVILGTFQLE RKKDGRNGVK GDDASGSGDL LPSSPSGAES LHGYRPVMEP SGRNSNDEHC
301: TMTSGGAHFM MQPPQGMHMT HARPSEWDGA GYDLSVLRGK GSSENGGYE
101: REKREQTAAA AGVSPPSKPG SKKSLSGSSG KSGQSFTPHI VNITPGEDVA QKIIHFAEQS KHELCILSAS GTISDASLSH LATGTSASYQ GQYEILSLSG
201: SYIRGEHGGK TGGLSVCLSS SDGQIVGGGV GGPLKAAGPV QVILGTFQLE RKKDGRNGVK GDDASGSGDL LPSSPSGAES LHGYRPVMEP SGRNSNDEHC
301: TMTSGGAHFM MQPPQGMHMT HARPSEWDGA GYDLSVLRGK GSSENGGYE
001: MAPMYYKRLN RLKSPTIRFS VALSKTGQCF TPHIVNITPG EDVAEKIVLF TQQSKHQLCV LSASGSISNA SLSHLASGTS HGGKTGGLSV CLSNSDGQIF
101: GGGVGGLLKA AGPVQVVLGT FQLEKKKDGR NGAKGDDASG SRNMLPSPSG TESLLGYHPD MESSGRNPND EHHTITSSAL GGGAHFMMKP PQGMHMTHAR
201: PSEWGGTGYD LSGKSS
101: GGGVGGLLKA AGPVQVVLGT FQLEKKKDGR NGAKGDDASG SRNMLPSPSG TESLLGYHPD MESSGRNPND EHHTITSSAL GGGAHFMMKP PQGMHMTHAR
201: PSEWGGTGYD LSGKSS
Arabidopsis Description
DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:F4K8J6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.