Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400073848 | Potato | nucleus | 93.77 | 95.76 |
| VIT_14s0081g00620.t01 | Wine grape | nucleus | 58.16 | 54.9 |
| KRH68809 | Soybean | nucleus | 55.19 | 53.76 |
| KRG97062 | Soybean | nucleus | 56.68 | 52.91 |
| CDY52506 | Canola | nucleus | 43.92 | 42.41 |
| Bra020612.1-P | Field mustard | nucleus | 44.21 | 42.33 |
| CDY05594 | Canola | nucleus | 43.92 | 41.57 |
| AT5G28590.1 | Thale cress | mitochondrion | 25.82 | 40.28 |
| CDY52477 | Canola | nucleus | 43.62 | 39.95 |
| CDY30005 | Canola | nucleus | 45.1 | 39.9 |
| Bra040133.1-P | Field mustard | nucleus | 45.1 | 39.69 |
| CDY65362 | Canola | nucleus | 43.62 | 39.52 |
| Bra009999.1-P | Field mustard | nucleus | 43.62 | 39.52 |
| AT3G04590.2 | Thale cress | nucleus | 48.07 | 39.42 |
| CDY21122 | Canola | nucleus | 45.1 | 39.38 |
| CDY13231 | Canola | nucleus | 39.17 | 32.2 |
| Solyc01g094460.2.1 | Tomato | nucleus | 32.05 | 31.86 |
| Solyc02g038760.2.1 | Tomato | nucleus | 30.27 | 31.29 |
| Solyc08g079630.2.1 | Tomato | nucleus | 29.38 | 30.84 |
| Solyc08g007530.2.1 | Tomato | nucleus | 29.97 | 30.79 |
| Solyc04g053090.1.1 | Tomato | plastid | 15.43 | 30.77 |
| Solyc08g080960.2.1 | Tomato | nucleus | 30.27 | 30.54 |
| Solyc02g082300.2.1 | Tomato | nucleus, plastid | 23.15 | 29.89 |
| Solyc01g091370.2.1 | Tomato | nucleus | 28.19 | 29.87 |
| Solyc08g008030.2.1 | Tomato | nucleus | 30.56 | 29.77 |
| Solyc03g007150.2.1 | Tomato | nucleus | 28.49 | 29.54 |
| Solyc04g053100.1.1 | Tomato | plastid | 14.24 | 28.92 |
| Solyc12g094710.1.1 | Tomato | nucleus | 29.97 | 28.29 |
| Solyc08g077030.2.1 | Tomato | nucleus | 31.45 | 25.92 |
| Solyc06g035430.2.1 | Tomato | nucleus | 25.52 | 24.86 |
| Solyc09g008940.2.1 | Tomato | nucleus | 29.08 | 23.5 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 13.35 | 23.44 |
| Solyc08g006950.2.1 | Tomato | nucleus | 24.63 | 21.23 |
Protein Annotations
| EnsemblPlants:Solyc11g006190.1.1 | EnsemblPlantsGene:Solyc11g006190.1 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF22 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0002769C35 |
| UniProt:K4D4N2 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:934195..941588
Molecular Weight (calculated)
34857.8 Da
IEP (calculated)
9.617
GRAVY (calculated)
-0.482
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPNETSGLN SYFHHHIHHQ PPPSQPPQNP NPTTTTTTTN GIVSINNPTA NANANTTVGA ASHMVYTGSL PSAVSPTMES VKRKRGRPRK YSTPEQAAAA
101: KRLSSASAPP KKRDHGLSHV AGADGGGGGS SKKSQLAALG NAGQGFTPHI ITVSAGEDVG QKIMMFMQQS KHELCILSAS GSVSNASLRQ PATSGGSITY
201: EGRFDILTLA GSYVRTETGG RTGGLSVCLA SNDGQIIGGG VGGPLIAGGP IQVIVGSFSV DSKTGGLKHD TSAQFGGSPL SFRSMVDSSN QSMGGGQFMM
301: PSRGMQPTPL HSTDWRVTTG QGLHQSPENG DYDHLRD
101: KRLSSASAPP KKRDHGLSHV AGADGGGGGS SKKSQLAALG NAGQGFTPHI ITVSAGEDVG QKIMMFMQQS KHELCILSAS GSVSNASLRQ PATSGGSITY
201: EGRFDILTLA GSYVRTETGG RTGGLSVCLA SNDGQIIGGG VGGPLIAGGP IQVIVGSFSV DSKTGGLKHD TSAQFGGSPL SFRSMVDSSN QSMGGGQFMM
301: PSRGMQPTPL HSTDWRVTTG QGLHQSPENG DYDHLRD
001: MDPNESHHHH QQQQLHHLHQ QQQQQQQQQR LTSPYFHHQL QHHHHLPTTV ATTASTGNAV PSSNNGLFPP QPQPQHQPND GSSSLAVYPH SVPSSAVTAP
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGKVCRV
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGKVCRV
Arabidopsis Description
AHL14AT-hook motif nuclear-localized protein 14 [Source:UniProtKB/Swiss-Prot;Acc:A1L4X7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.