Factsheet for Bra009999.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65362	Canola	nucleus	98.66	98.66
CDY52477	Canola	nucleus	97.58	98.64
Bra020612.1-P	Field mustard	nucleus	78.49	82.95
AT5G28590.1	Thale cress	mitochondrion	43.28	74.54
Bra040133.1-P	Field mustard	nucleus	61.02	59.27
KRH68809	Soybean	nucleus	44.62	47.98
KRG97062	Soybean	nucleus	44.62	45.98
VIT_14s0081g00620.t01	Wine grape	nucleus	44.09	45.94
PGSC0003DMT400073848	Potato	nucleus	40.05	45.15
Solyc11g006190.1.1	Tomato	nucleus	39.52	43.62
Bra022946.1-P	Field mustard	nucleus	23.92	33.97
Bra025716.1-P	Field mustard	nucleus	21.24	29.37
Bra033121.1-P	Field mustard	nucleus	22.58	27.1
Bra039309.1-P	Field mustard	nucleus	24.73	26.98
Bra037321.1-P	Field mustard	nucleus	22.85	26.9
Bra025717.1-P	Field mustard	nucleus	21.77	26.73
Bra025511.1-P	Field mustard	nucleus	19.62	26.35
Bra014444.1-P	Field mustard	nucleus	23.39	26.13
Bra027642.1-P	Field mustard	nucleus	26.34	25.72
Bra025718.1-P	Field mustard	nucleus, plastid	20.97	25.66
Bra007595.1-P	Field mustard	nucleus	23.39	25.51
Bra019359.1-P	Field mustard	nucleus	22.31	25.23
Bra021865.1-P	Field mustard	nucleus	23.66	25.14
Bra019174.1-P	Field mustard	nucleus	26.61	25.0
Bra027801.1-P	Field mustard	nucleus	24.73	24.53
Bra013886.1-P	Field mustard	nucleus	24.73	24.15
Bra017536.1-P	Field mustard	nucleus	22.85	24.08
Bra013646.1-P	Field mustard	nucleus	19.62	23.93
Bra029164.1-P	Field mustard	nucleus	26.34	23.11
Bra003446.1-P	Field mustard	nucleus	20.97	23.01
Bra035899.1-P	Field mustard	nucleus	23.66	22.45
Bra021027.1-P	Field mustard	nucleus	24.46	22.2
Bra028265.1-P	Field mustard	nucleus	25.27	21.91
Bra022555.1-P	Field mustard	nucleus	24.46	21.72
Bra029271.1-P	Field mustard	cytosol, nucleus, peroxisome	23.12	21.45
Bra010070.1-P	Field mustard	nucleus	22.85	21.09
Bra013270.1-P	Field mustard	nucleus	23.66	20.66

Protein Annotations

EnsemblPlants:Bra009999.1	EnsemblPlants:Bra009999.1-P	EnsemblPlantsGene:Bra009999	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF22	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI000253EE5B	UniProt:M4D0K1	MapMan:35.1	:	:	:

Description

AT3G04590 (E=7e-067) | DNA-binding family protein

Coordinates

chrA06:-:18552239..18554524

Molecular Weight (calculated)

38982.2 Da

IEP (calculated)

8.941

GRAVY (calculated)

-0.677

Length

372 amino acids

Sequence
(BLAST)

001: MEPNERHHHQ QQQQQQQQQH HHHHLTSPYY HPFHHHNPTT VSAAPPTTST NNGNLTSPPP SNDGSSSSLP VYPHSVPSSA VTAPIDPVKR KRGRPRKYDT
101: PAQALAAKKL ASSASNSSAR ERREQAAAAG VSPPPSKSGS RKGLSGYVGK TGQSFTPHIV SITPGEDVAQ KIILFAEQSK HEICILSASG AISSASLSHI
201: ATGTSVSYQG HYEILSLSGS YIRSEHGGKT GGLSICLSGS DGQIIGGRVG GLLKAAGPVQ VIVGTFQLEK KKDGGNDVKG DDASGSGSLL PSPSGTESLH
301: VYHPSMESSG RNLNNEHHTM TSGGALGGGA HFMMQPPQGM HMSHARPSEW GGAGYDLSGM RGNGSSENGD YE

Best Arabidopsis Sequence Match ( AT3G04590.2 )
(BLAST)

001: MDPNESHHHH QQQQLHHLHQ QQQQQQQQQR LTSPYFHHQL QHHHHLPTTV ATTASTGNAV PSSNNGLFPP QPQPQHQPND GSSSLAVYPH SVPSSAVTAP
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGSRLTSP VSSGQLLGMG FPPGMESTGR NPMRGNDEQH DHHHHQAGLG GPHHFMMQAP QGIHMTHSRP SEWRGGGNSG HDGRGGGGYD LSGRIGHESS
401: ENGDYEQQIP D

Arabidopsis Description

AHL14AT-hook motif nuclear-localized protein 14 [Source:UniProtKB/Swiss-Prot;Acc:A1L4X7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.