Factsheet for Bra021865.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37704	Canola	nucleus	97.14	90.67
Bra022946.1-P	Field mustard	nucleus	61.43	82.06
AT2G33620.2	Thale cress	nucleus	73.43	73.22
VIT_18s0122g00700.t01	Wine grape	nucleus	57.43	56.94
GSMUA_Achr6P03420_001	Banana	nucleus	52.29	50.83
GSMUA_Achr3P03710_001	Banana	nucleus	52.86	50.68
Os08t0512400-02	Rice	nucleus	51.14	50.56
KXG25625	Sorghum	nucleus	52.57	49.33
Os09t0491708-01	Rice	nucleus	50.0	48.75
GSMUA_Achr7P20540_001	Banana	nucleus	40.0	47.78
PGSC0003DMT400075370	Potato	nucleus	48.29	47.21
TraesCS7A01G248500.1	Wheat	nucleus	49.43	46.76
HORVU7Hr1G051150.4	Barley	nucleus	48.86	46.59
TraesCS7B01G143000.1	Wheat	nucleus	48.0	46.54
TraesCS7D01G247300.2	Wheat	mitochondrion, nucleus, peroxisome, plastid	49.14	46.49
GSMUA_Achr9P12360_001	Banana	extracellular, vacuole	53.14	45.7
OQU89696	Sorghum	nucleus	49.71	45.67
Solyc12g094710.1.1	Tomato	nucleus	46.57	45.66
Zm00001d052901_P002	Maize	nucleus	47.43	44.99
Zm00001d031481_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	50.86	43.2
GSMUA_Achr5P23820_001	Banana	cytosol, nucleus, plasma membrane	51.71	42.99
HORVU5Hr1G073550.1	Barley	nucleus, peroxisome, plastid	44.57	39.8
KRH51558	Soybean	nucleus	40.29	39.72
Zm00001d037425_P001	Maize	nucleus	40.29	39.5
Zm00001d006034_P003	Maize	nucleus	48.0	39.07
KRH60876	Soybean	nucleus	39.71	38.94
OQU76344	Sorghum	nucleus	40.0	38.67
Os06t0326000-01	Rice	nucleus	41.71	38.62
Bra033121.1-P	Field mustard	nucleus	30.86	34.84
Bra013646.1-P	Field mustard	nucleus	29.71	34.1
Bra037321.1-P	Field mustard	nucleus	30.0	33.23
Bra019359.1-P	Field mustard	nucleus	29.43	31.31
Bra025511.1-P	Field mustard	nucleus	24.57	31.05
Bra017536.1-P	Field mustard	nucleus	31.14	30.88
Bra025716.1-P	Field mustard	nucleus	23.14	30.11
Bra007595.1-P	Field mustard	nucleus	29.14	29.91
Bra027801.1-P	Field mustard	nucleus	32.0	29.87
Bra021027.1-P	Field mustard	nucleus	34.86	29.76
TraesCS7B01G035400.1	Wheat	cytosol	16.86	29.5
Bra014444.1-P	Field mustard	nucleus	28.0	29.43
Bra025717.1-P	Field mustard	nucleus	25.14	29.04
Bra039309.1-P	Field mustard	nucleus	28.29	29.03
TraesCS7A01G134300.1	Wheat	cytosol	16.29	28.93
Bra013270.1-P	Field mustard	nucleus	34.57	28.4
Bra027642.1-P	Field mustard	nucleus	30.86	28.35
Bra029164.1-P	Field mustard	nucleus	34.29	28.3
Solyc12g019430.1.1	Tomato	cytosol, plastid, vacuole	15.43	28.12
Bra019174.1-P	Field mustard	nucleus	31.71	28.03
HORVU7Hr1G027950.1	Barley	extracellular, mitochondrion, plasma membrane	18.86	27.85
Bra013886.1-P	Field mustard	nucleus	30.0	27.56
Bra022555.1-P	Field mustard	nucleus	32.86	27.45
PGSC0003DMT400075372	Potato	cytosol, nucleus, peroxisome	25.43	27.3
Bra028265.1-P	Field mustard	nucleus	33.14	27.04
Bra025718.1-P	Field mustard	nucleus, plastid	23.43	26.97
Bra035899.1-P	Field mustard	nucleus	29.71	26.53
TraesCS7D01G133700.1	Wheat	cytosol	17.14	26.09
Bra010070.1-P	Field mustard	nucleus	30.0	26.05
Bra003446.1-P	Field mustard	nucleus	25.14	25.96
TraesCS7D01G134100.1	Wheat	nucleus	26.57	25.69
TraesCS7B01G035900.1	Wheat	nucleus	26.0	25.07
Bra029271.1-P	Field mustard	cytosol, nucleus, peroxisome	27.71	24.19
Bra020612.1-P	Field mustard	nucleus	24.0	23.86
Bra040133.1-P	Field mustard	nucleus	26.0	23.76
Bra009999.1-P	Field mustard	nucleus	25.14	23.66
HORVU7Hr1G028110.15	Barley	plasma membrane	24.86	23.45

Protein Annotations

EnsemblPlants:Bra021865.1	EnsemblPlants:Bra021865.1-P	EnsemblPlantsGene:Bra021865	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF0	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI00025436E0	UniProt:M4DZB8	MapMan:35.1	:	:	:

Description

AT2G33620 (E=4e-119) | DNA-binding family protein / AT-hook protein 1 (AHP1)

Coordinates

chrA04:+:14931533..14933220

Molecular Weight (calculated)

36263.7 Da

IEP (calculated)

10.315

GRAVY (calculated)

-0.485

Length

350 amino acids

Sequence
(BLAST)

001: MSGSETGLTA ANREPMPFTM SLHHQQHNQP PPPPQPQQNS QNMQLSFTGA DRTAVYKPMS SDSSPPQQYQ HNSVTGLNMN VPVMGGEQRV KKRRGRPRKY
101: EPGSGGASMG FVPGPPSYTV SQPSGGDGGG GGASPTVKRM RGRPSGSSNR PKLQALGSTG VGFTPHVLTV NTGEDVSSKI MAFSQNGPRA VCVLSANGAI
201: SNVTLRQAAT SGGTVTYEGR FEILSLSGSF LLLENNGHRS RTGGLSVSLS APDGNVLGGC VAGLLIAATP VQIVVGSFIP DGQKEHVGQM ELASPALPRV
301: APSHVLTTPN SQQARGGMSE SSCGGHGSPL HQSAGGPYNN NSNNLSMSWK

Best Arabidopsis Sequence Match ( AT2G33620.3 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.