Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G134300.1 | Wheat | cytosol | 86.0 | 87.31 |
| TraesCS7D01G133700.1 | Wheat | cytosol | 91.5 | 79.57 |
| HORVU7Hr1G027950.1 | Barley | extracellular, mitochondrion, plasma membrane | 80.0 | 67.51 |
| TraesCS7B01G035900.1 | Wheat | nucleus | 68.5 | 37.74 |
| OQU76344 | Sorghum | nucleus | 38.5 | 21.27 |
| Zm00001d037425_P001 | Maize | nucleus | 37.0 | 20.73 |
| Os06t0326000-01 | Rice | nucleus | 38.5 | 20.37 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 35.0 | 19.83 |
| PGSC0003DMT400075370 | Potato | nucleus | 35.0 | 19.55 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 25.5 | 19.47 |
| CDX84679 | Canola | nucleus | 25.5 | 19.47 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 34.5 | 19.17 |
| Bra022946.1-P | Field mustard | nucleus | 25.0 | 19.08 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 34.5 | 18.9 |
| Solyc12g094710.1.1 | Tomato | nucleus | 33.0 | 18.49 |
| TraesCS7B01G143000.1 | Wheat | nucleus | 33.0 | 18.28 |
| AT2G33620.2 | Thale cress | nucleus | 31.0 | 17.66 |
| TraesCS7B01G215600.1 | Wheat | plastid | 34.5 | 17.51 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 34.5 | 16.95 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 27.5 | 16.87 |
| Bra021865.1-P | Field mustard | nucleus | 29.5 | 16.86 |
| TraesCS6B01G114000.1 | Wheat | cytosol, nucleus, peroxisome | 32.5 | 16.62 |
| KRH51558 | Soybean | nucleus | 29.0 | 16.34 |
| KRH60876 | Soybean | nucleus | 29.0 | 16.25 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 33.5 | 15.91 |
| TraesCS5B01G266600.1 | Wheat | endoplasmic reticulum, mitochondrion, nucleus, peroxisome | 31.0 | 15.7 |
| CDY37704 | Canola | nucleus | 29.0 | 15.47 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 30.5 | 15.33 |
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 31.5 | 15.29 |
| TraesCS5B01G130400.1 | Wheat | plastid | 27.0 | 14.67 |
| TraesCS5B01G129200.1 | Wheat | plastid | 26.5 | 14.44 |
| TraesCS1B01G206100.2 | Wheat | nucleus | 30.5 | 13.53 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 25.0 | 12.41 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 27.5 | 11.68 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 11.0 | 11.46 |
| TraesCS5B01G266500.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G035400.1 | EnsemblPlantsGene:TraesCS7B01G035400 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PFAM:PF03479 |
| PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7B:-:34516687..34519091
Molecular Weight (calculated)
19906.4 Da
IEP (calculated)
4.306
GRAVY (calculated)
0.052
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGAVPAGA GKAAYGAGLP KSPLHPQPQP TVGARLADAE QEPCAAEIVP QIITVQGGQD VAMEVKSYGG NGWAFFIISA EGAVSNVTLH QPASPLEIVI
101: HEGCFDIVSM TGSYLPSKTD GVSTLKGGFA ISLVGADGRI FGGGLAGPLI AASPVQVVIG RFAADEKEEM KQDVASGTPG ATESSDSATG SSSGPASPSN
101: HEGCFDIVSM TGSYLPSKTD GVSTLKGGFA ISLVGADGRI FGGGLAGPLI AASPVQVVIG RFAADEKEEM KQDVASGTPG ATESSDSATG SSSGPASPSN
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Arabidopsis Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.