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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, endoplasmic reticulum, peroxisome, mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • endoplasmic reticulum 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion, nucleus, peroxisome
Any Predictor:endoplasmic reticulum, mitochondrion, nucleus, peroxisome
MultiLoc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G274900.1 Wheat plastid 72.15 97.27
TraesCS5A01G267000.1 Wheat nucleus, peroxisome, vacuole 96.96 96.47
TraesCS7B01G143000.1 Wheat nucleus 49.62 54.29
Zm00001d020951_P002 Maize cytosol, nucleus, peroxisome, plastid 45.57 53.73
Solyc02g038760.2.1 Tomato nucleus 32.91 39.88
PGSC0003DMT400059682 Potato nucleus 32.66 39.57
TraesCS2B01G470900.1 Wheat cytosol, nucleus, peroxisome, plastid 39.24 37.62
PGSC0003DMT400035486 Potato nucleus, plastid 23.29 35.25
TraesCS1B01G206100.2 Wheat nucleus 38.99 34.15
TraesCS5B01G130400.1 Wheat plastid 29.62 31.79
Solyc02g082300.2.1 Tomato nucleus, plastid 20.76 31.42
TraesCS5B01G129200.1 Wheat plastid 29.11 31.34
TraesCS7B01G035400.1 Wheat cytosol 15.7 31.0
TraesCS7B01G215600.1 Wheat plastid 30.38 30.46
TraesCS6B01G114000.1 Wheat cytosol, nucleus, peroxisome 28.1 28.39
TraesCS2B01G604700.1 Wheat nucleus 26.84 26.3
TraesCS7B01G035900.1 Wheat nucleus 23.29 25.34
TraesCS6B01G447600.1 Wheat nucleus 29.11 24.42
TraesCS5A01G266900.1 Wheat cytosol 0.51 1.71
TraesCS5B01G266500.1 Wheat cytosol 0.51 1.71
TraesCS5D01G274800.1 Wheat cytosol 0.51 1.71
Zm00001d020950_P001 Maize cytosol 0.51 1.71
Protein Annotations
EnsemblPlants:TraesCS5B01G266600.1EnsemblPlantsGene:TraesCS5B01G266600Gene3D:3.30.1330.80InterPro:IPR005175InterPro:PPC_domPANTHER:PTHR31500
PANTHER:PTHR31500:SF13PFAM:PF03479PFscan:PS51742SEG:segSUPFAM:SSF117856TIGR:cd11378
MapMan:35.1:::::
Description
No Description!
Coordinates
chr5B:-:450842972..450845854
Molecular Weight (calculated)
39697.4 Da
IEP (calculated)
10.175
GRAVY (calculated)
-0.164
Length
395 amino acids
Sequence
(BLAST)
001: MMEVRASQEQ QRGMAGREPF GLPNSPPTPQ SSGPVPNMRM TYGEDGNAYF LKPGSAPPPA EAYQPGGGAG LNMPAGPNAA AAGGNGGPAF ELNMEEEAAK
101: KRGRAMKYGD DGSTSLALVP VPMPEEPTAV APGDSGAFSA PAVKPAAGGV LAVPPVGMKK RGRPKGSTNK VKKQDKVMSA LAFIGTAGAG FTPHVIAVQA
201: GEDVAAKILS FAQHGVRAVV VLSANGAISN VTLRQSATSG GTVTYEGRFE ILSLSGSFTV QETGGHRSRT GGLSVSLASP DGRVLGGGIA GLLIACTPIQ
301: VVVGTFNTVA EKKAPKHQAA AAHEPASAPP RMTPNFVPAP IAVPPLATAP ISVGMAQNSP PSRGTLSESS GSPMNQGVPA AATPSNSGLS SMPWK
Best Arabidopsis Sequence Match ( AT2G33620.3 )
(BLAST)
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.