Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G582300.1 | Wheat | nucleus | 93.55 | 93.32 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 93.55 | 93.09 |
| HORVU2Hr1G123730.3 | Barley | plastid | 47.64 | 91.43 |
| Os04t0683900-01 | Rice | nucleus | 70.47 | 67.78 |
| KXG27470 | Sorghum | nucleus | 68.73 | 66.27 |
| Zm00001d026652_P001 | Maize | plastid | 64.76 | 65.74 |
| Zm00001d001784_P002 | Maize | nucleus | 64.27 | 59.54 |
| VIT_15s0046g02930.t01 | Wine grape | nucleus, plastid | 34.99 | 40.87 |
| KRH05193 | Soybean | plastid | 14.64 | 40.14 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 31.51 | 38.14 |
| KRH40471 | Soybean | nucleus | 32.26 | 38.12 |
| KRH00715 | Soybean | nucleus | 32.01 | 37.72 |
| KRH48165 | Soybean | nucleus | 31.76 | 37.65 |
| VIT_02s0025g03580.t01 | Wine grape | nucleus | 32.26 | 37.57 |
| KRH65066 | Soybean | nucleus | 31.51 | 37.35 |
| Solyc08g080960.2.1 | Tomato | nucleus | 30.52 | 36.83 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 17.37 | 35.71 |
| PGSC0003DMT400014926 | Potato | plastid | 30.52 | 35.65 |
| Solyc08g008030.2.1 | Tomato | nucleus | 30.52 | 35.55 |
| KRH27929 | Soybean | nucleus | 31.02 | 35.51 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 30.27 | 35.26 |
| Bra039309.1-P | Field mustard | nucleus | 29.28 | 34.6 |
| CDY37070 | Canola | nucleus | 29.28 | 34.6 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 27.79 | 34.36 |
| CDY42495 | Canola | nucleus | 28.78 | 34.32 |
| Solyc01g094460.2.1 | Tomato | nucleus | 28.78 | 34.22 |
| KRH77536 | Soybean | nucleus | 30.27 | 34.17 |
| CDY27354 | Canola | nucleus | 29.53 | 34.1 |
| PGSC0003DMT400000467 | Potato | nucleus | 28.54 | 33.92 |
| CDY58791 | Canola | nucleus | 27.54 | 33.84 |
| CDX89109 | Canola | nucleus | 28.04 | 33.73 |
| Bra014444.1-P | Field mustard | nucleus | 27.79 | 33.63 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 29.53 | 33.62 |
| GSMUA_Achr11P... | Banana | nucleus | 31.27 | 33.6 |
| GSMUA_Achr11P... | Banana | nucleus | 30.77 | 33.42 |
| KRH59866 | Soybean | nucleus | 29.03 | 33.24 |
| CDY51561 | Canola | nucleus | 28.04 | 33.24 |
| Bra007595.1-P | Field mustard | nucleus | 28.04 | 33.14 |
| AT2G45850.1 | Thale cress | nucleus | 28.54 | 33.05 |
| CDY48928 | Canola | nucleus | 28.04 | 32.85 |
| KRH41165 | Soybean | nucleus | 28.54 | 32.67 |
| CDX71746 | Canola | nucleus | 27.54 | 32.27 |
| CDY25500 | Canola | nucleus | 29.53 | 32.16 |
| CDY45364 | Canola | nucleus | 29.28 | 32.15 |
| Bra025511.1-P | Field mustard | nucleus | 22.08 | 32.13 |
| PGSC0003DMT400031843 | Potato | plastid | 30.27 | 31.77 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 28.54 | 31.77 |
| AT1G63470.1 | Thale cress | nucleus | 29.78 | 31.75 |
| Bra027801.1-P | Field mustard | nucleus | 29.28 | 31.47 |
| Bra003446.1-P | Field mustard | nucleus | 26.3 | 31.27 |
| Bra027642.1-P | Field mustard | nucleus | 29.28 | 30.97 |
| CDY34355 | Canola | nucleus | 28.54 | 30.42 |
| AT1G63480.1 | Thale cress | nucleus | 27.05 | 30.19 |
| TraesCS7B01G143000.1 | Wheat | nucleus | 27.05 | 30.19 |
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 30.52 | 29.85 |
| CDY39751 | Canola | nucleus | 25.56 | 26.96 |
| CDY46385 | Canola | nucleus | 25.56 | 26.96 |
| TraesCS5B01G266600.1 | Wheat | endoplasmic reticulum, mitochondrion, nucleus, peroxisome | 26.3 | 26.84 |
| TraesCS5B01G130400.1 | Wheat | plastid | 24.32 | 26.63 |
| TraesCS5B01G129200.1 | Wheat | plastid | 24.07 | 26.43 |
| TraesCS7B01G215600.1 | Wheat | plastid | 25.81 | 26.4 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 29.78 | 25.48 |
| TraesCS7B01G035400.1 | Wheat | cytosol | 12.41 | 25.0 |
| TraesCS1B01G206100.2 | Wheat | nucleus | 26.55 | 23.73 |
| TraesCS7B01G035900.1 | Wheat | nucleus | 21.34 | 23.69 |
| TraesCS6B01G114000.1 | Wheat | cytosol, nucleus, peroxisome | 22.83 | 23.53 |
| TraesCS5B01G266500.1 | Wheat | cytosol | 0.74 | 2.56 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G604700.1 | EnsemblPlantsGene:TraesCS2B01G604700 | Gene3D:3.30.1330.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:AT_hook_DNA-bd_motif | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF19 |
| PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SMART:SM00384 | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:786223991..786226198
Molecular Weight (calculated)
41069.5 Da
IEP (calculated)
10.408
GRAVY (calculated)
-0.433
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGKDLIAPS DLPPFYGQQQ PQQHLRMLGG TGGGGGQHSP SSLAGMHSVI RPMPNMSMSP TAILQSIGGG GASSLAAMQF SMDNATSPSS MLQHNSMGGG
101: SVSGSGGTMP VASPPPEPVK RKRGRPRKYG PDGAMKHHMS SSSAQQQQHQ HHQMMGAPQQ RMGSMAGQGM AGGIDDAAQK KKRGRPPGTG KKLSSPTSKP
201: SGNAFPGSAG TSFTPHIITA SPSEDVAGKI AAFASQSPRA VCVLSAMGSV SRAVLRHPAD HPPSYNNSAI YEGLYEILSL SGSYNLNEGQ QNQTDGISVT
301: LCSQERHIIG GVLGGALVAA STVQVVLGTF VQAGSKSKSK KAAKPPAFGP DSLTGAGPDV ASPSSGHNQN LTSPPSVVST GGWPGSGIFD TRSSSIDINS
401: SRG
101: SVSGSGGTMP VASPPPEPVK RKRGRPRKYG PDGAMKHHMS SSSAQQQQHQ HHQMMGAPQQ RMGSMAGQGM AGGIDDAAQK KKRGRPPGTG KKLSSPTSKP
201: SGNAFPGSAG TSFTPHIITA SPSEDVAGKI AAFASQSPRA VCVLSAMGSV SRAVLRHPAD HPPSYNNSAI YEGLYEILSL SGSYNLNEGQ QNQTDGISVT
301: LCSQERHIIG GVLGGALVAA STVQVVLGTF VQAGSKSKSK KAAKPPAFGP DSLTGAGPDV ASPSSGHNQN LTSPPSVVST GGWPGSGIFD TRSSSIDINS
401: SRG
001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG
Arabidopsis Description
AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.