Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 95.79 | 95.56 |
| HORVU2Hr1G123730.3 | Barley | plastid | 48.76 | 93.81 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 93.32 | 93.55 |
| Os04t0683900-01 | Rice | nucleus | 72.03 | 69.45 |
| KXG27470 | Sorghum | nucleus | 70.05 | 67.7 |
| Zm00001d026652_P001 | Maize | plastid | 64.85 | 66.0 |
| Zm00001d001784_P002 | Maize | nucleus | 65.84 | 61.15 |
| VIT_15s0046g02930.t01 | Wine grape | nucleus, plastid | 35.15 | 41.16 |
| KRH05193 | Soybean | plastid | 14.85 | 40.82 |
| KRH40471 | Soybean | nucleus | 33.17 | 39.3 |
| KRH00715 | Soybean | nucleus | 32.92 | 38.89 |
| KRH48165 | Soybean | nucleus | 32.67 | 38.82 |
| KRH65066 | Soybean | nucleus | 32.43 | 38.53 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 31.44 | 38.14 |
| VIT_02s0025g03580.t01 | Wine grape | nucleus | 32.43 | 37.86 |
| Solyc08g080960.2.1 | Tomato | nucleus | 31.19 | 37.72 |
| PGSC0003DMT400014926 | Potato | plastid | 31.19 | 36.52 |
| Solyc08g008030.2.1 | Tomato | nucleus | 31.19 | 36.42 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 17.57 | 36.22 |
| Solyc01g094460.2.1 | Tomato | nucleus | 30.2 | 35.99 |
| PGSC0003DMT400000467 | Potato | nucleus | 29.95 | 35.69 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 30.45 | 35.55 |
| Bra039309.1-P | Field mustard | nucleus | 29.7 | 35.19 |
| CDY37070 | Canola | nucleus | 29.7 | 35.19 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 28.22 | 34.97 |
| KRH27929 | Soybean | nucleus | 30.45 | 34.94 |
| CDY42495 | Canola | nucleus | 29.21 | 34.91 |
| CDY27354 | Canola | nucleus | 29.95 | 34.67 |
| Bra007595.1-P | Field mustard | nucleus | 28.96 | 34.31 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 29.95 | 34.18 |
| CDY58791 | Canola | nucleus | 27.72 | 34.15 |
| CDX89109 | Canola | nucleus | 28.22 | 34.03 |
| Bra014444.1-P | Field mustard | nucleus | 27.97 | 33.93 |
| AT2G45850.1 | Thale cress | nucleus | 29.21 | 33.91 |
| KRH77536 | Soybean | nucleus | 29.95 | 33.89 |
| CDY51561 | Canola | nucleus | 28.47 | 33.82 |
| CDX71746 | Canola | nucleus | 28.47 | 33.43 |
| CDY48928 | Canola | nucleus | 28.47 | 33.43 |
| GSMUA_Achr11P... | Banana | nucleus | 30.69 | 33.42 |
| GSMUA_Achr11P... | Banana | nucleus | 30.94 | 33.33 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 25.25 | 33.22 |
| KRH59866 | Soybean | nucleus | 28.71 | 32.95 |
| PGSC0003DMT400031843 | Potato | plastid | 30.94 | 32.55 |
| CDY25500 | Canola | nucleus | 29.7 | 32.43 |
| CDY45364 | Canola | nucleus | 29.21 | 32.15 |
| KRH41165 | Soybean | nucleus | 27.97 | 32.1 |
| AT1G63470.1 | Thale cress | nucleus | 29.95 | 32.01 |
| Bra025511.1-P | Field mustard | nucleus | 21.78 | 31.77 |
| Bra003446.1-P | Field mustard | nucleus | 26.49 | 31.56 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 28.22 | 31.49 |
| Bra027801.1-P | Field mustard | nucleus | 29.21 | 31.47 |
| Bra027642.1-P | Field mustard | nucleus | 29.21 | 30.97 |
| CDY34355 | Canola | nucleus | 28.47 | 30.42 |
| TraesCS7A01G248500.1 | Wheat | nucleus | 27.48 | 30.0 |
| AT1G63480.1 | Thale cress | nucleus | 26.49 | 29.64 |
| TraesCS2A01G449500.1 | Wheat | plastid | 29.21 | 28.78 |
| TraesCS5A01G267000.1 | Wheat | nucleus, peroxisome, vacuole | 26.49 | 26.95 |
| TraesCS5A01G130500.1 | Wheat | plastid | 24.5 | 26.83 |
| CDY39751 | Canola | nucleus | 25.0 | 26.44 |
| CDY46385 | Canola | nucleus | 25.0 | 26.44 |
| TraesCS7A01G315100.1 | Wheat | plastid | 25.25 | 25.63 |
| TraesCS7A01G134300.1 | Wheat | cytosol | 12.38 | 25.38 |
| TraesCS1A01G190900.1 | Wheat | nucleus | 26.98 | 24.01 |
| TraesCS6A01G083100.1 | Wheat | cytosol, nucleus, peroxisome | 23.27 | 23.74 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 30.45 | 23.16 |
| TraesCS5A01G266900.1 | Wheat | cytosol | 0.74 | 2.56 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G582300.1 | EnsemblPlantsGene:TraesCS2A01G582300 | Gene3D:3.30.1330.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:AT_hook_DNA-bd_motif | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF19 |
| PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SMART:SM00384 | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:774574272..774576236
Molecular Weight (calculated)
41326.8 Da
IEP (calculated)
10.408
GRAVY (calculated)
-0.466
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGKDLISPS DLPPFYGQQQ QQQQHLRMLG GTGGGGGQHS PSSLAGMHSV IRPMPNMSMS PTAILQSIGG GASSLAGMQF NMDNTTSPSS MLQHAGNMGG
101: SVSGSGTTMP VASPPPEPVK RKRGRPRKYG PDGAMKHHMS SSSSSAHHQQ QQHQMMGAPQ QRMGSMAGQG MAGGLDDAAQ KKKRGRPPGT GKKLSSPSSK
201: PSGNAFPGSA GTSFTPHIIT ASPSEDVAGK IAAFASQSPR AVCVLSAMGS VSRAVLRHPA DHPPSYNNPA IYEGLYEILS LSGSYNLNEG QQNQTDGISV
301: TLCSPERHVI GGVLGGALVA ASTVQVVLGT FVQGGSKSKS KKAAKPPAFG PDSLTGAGPD VVSPSSGHNQ NLTSPPSVVS TGGWPSSGIF DTRSSNIDIN
401: SSRG
101: SVSGSGTTMP VASPPPEPVK RKRGRPRKYG PDGAMKHHMS SSSSSAHHQQ QQHQMMGAPQ QRMGSMAGQG MAGGLDDAAQ KKKRGRPPGT GKKLSSPSSK
201: PSGNAFPGSA GTSFTPHIIT ASPSEDVAGK IAAFASQSPR AVCVLSAMGS VSRAVLRHPA DHPPSYNNPA IYEGLYEILS LSGSYNLNEG QQNQTDGISV
301: TLCSPERHVI GGVLGGALVA ASTVQVVLGT FVQGGSKSKS KKAAKPPAFG PDSLTGAGPD VVSPSSGHNQ NLTSPPSVVS TGGWPSSGIF DTRSSNIDIN
401: SSRG
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.