Factsheet for Os04t0683900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0675000-01
Os01t0760300-01
Os02t0125200-00
Os02t0824300-01
Os04t0589900-01
Os04t0683900-01
Os05t0560100-01
Os06t0152100-01
Os10t0323600-01
Os10t0323900-01
Os10t0572900-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63480.1	Os02t0824300-01	AT3G61310.1	21798944
AT1G63480.1	Os04t0683900-01	AT3G61310.1	21798944
AT1G63480.1	Os06t0152100-01	AT5G56600.1	21798944
AT1G63480.1	Os10t0323600-01	AT5G56600.1	21798944
AT1G63480.1	Os10t0323900-01	AT5G56600.1	21798944
AT2G45850.1	Os02t0125200-00	AT4G12080.1	21798944
AT2G45850.1	Os04t0589900-01	AT4G17950.1	21798944
AT2G45850.1	Os10t0572900-02	AT4G17950.1	21798944
AT3G61310.1	Os01t0675000-01	AT1G52240.1	21798944
AT3G61310.1	Os01t0760300-01	AT1G52240.1	21798944
AT3G61310.1	Os05t0560100-01	AT1G52240.1	21798944
AT3G61310.1	Os02t0824300-01	AT2G45850.1	21798944
AT3G61310.1	Os04t0683900-01	AT2G45850.1	21798944
AT3G61310.1	Os02t0824300-01	AT3G61310.1	21798944
AT3G61310.1	Os04t0683900-01	AT3G61310.1	21798944
AT3G61310.1	Os02t0125200-00	AT4G12080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G123730.3	Barley	plastid	40.33	80.48
KXG27470	Sorghum	nucleus	72.79	72.97
TraesCS2A01G582300.1	Wheat	nucleus	69.45	72.03
TraesCS2D01G597900.1	Wheat	cytosol, nucleus, plasma membrane, plastid	68.97	71.36
Zm00001d026652_P001	Maize	plastid	67.06	70.78
TraesCS2B01G604700.1	Wheat	nucleus	67.78	70.47
Zm00001d001784_P002	Maize	nucleus	67.54	65.06
VIT_15s0046g02930.t01	Wine grape	nucleus, plastid	32.7	39.71
GSMUA_Achr5P20630_001	Banana	nucleus, plasma membrane, plastid	30.79	38.74
VIT_02s0025g03580.t01	Wine grape	nucleus	31.74	38.44
KRH40471	Soybean	nucleus	31.26	38.42
KRH00715	Soybean	nucleus	31.26	38.3
KRH05193	Soybean	plastid	13.13	37.41
KRH48165	Soybean	nucleus	30.31	37.35
KRH65066	Soybean	nucleus	30.07	37.06
KRH27929	Soybean	nucleus	31.03	36.93
Solyc01g094460.2.1	Tomato	nucleus	29.83	36.87
GSMUA_Achr1P03070_001	Banana	cytosol, extracellular, nucleus	17.18	36.73
Solyc08g080960.2.1	Tomato	nucleus	29.12	36.53
PGSC0003DMT400000467	Potato	nucleus	29.36	36.28
GSMUA_Achr4P30000_001	Banana	nucleus	28.16	36.2
KRH77536	Soybean	nucleus	30.79	36.13
GSMUA_Achr8P11400_001	Banana	nucleus	29.83	36.13
Solyc08g008030.2.1	Tomato	nucleus	29.12	35.26
CDY42495	Canola	nucleus	28.4	35.21
PGSC0003DMT400014926	Potato	plastid	28.88	35.07
Bra014444.1-P	Field mustard	nucleus	27.45	34.53
GSMUA_Achr11P...	Banana	nucleus	30.79	34.4
Os10t0572900-02	Rice	nucleus	20.53	34.26
CDY58791	Canola	nucleus	26.73	34.15
CDY51561	Canola	nucleus	27.68	34.12
CDX89109	Canola	nucleus	27.21	34.03
GSMUA_Achr11P...	Banana	nucleus	30.07	33.96
CDY45364	Canola	nucleus	29.59	33.79
CDY25500	Canola	nucleus	29.83	33.78
Bra007595.1-P	Field mustard	nucleus	27.21	33.43
AT1G63470.1	Thale cress	nucleus	30.07	33.33
Bra027801.1-P	Field mustard	nucleus	29.83	33.33
Bra025511.1-P	Field mustard	nucleus	21.96	33.21
CDY64088	Canola	nucleus, plasma membrane, plastid	28.64	33.15
AT3G61310.1	Thale cress	nucleus, plastid	27.92	33.05
KRH59866	Soybean	nucleus	27.68	32.95
KRH41165	Soybean	nucleus	27.68	32.95
CDY48928	Canola	nucleus	26.97	32.85
CDY37070	Canola	nucleus	26.73	32.84
Bra039309.1-P	Field mustard	nucleus	26.73	32.84
AT2G45850.1	Thale cress	nucleus	27.21	32.76
Os02t0824300-01	Rice	nucleus	30.79	32.74
CDY27354	Canola	nucleus	27.21	32.66
CDX71746	Canola	nucleus	26.73	32.56
Bra027642.1-P	Field mustard	nucleus	29.36	32.28
Os09t0491708-01	Rice	nucleus	27.45	32.03
Os04t0589900-01	Rice	nucleus	28.88	31.93
Bra003446.1-P	Field mustard	nucleus	25.78	31.86
Os08t0512400-02	Rice	nucleus	26.73	31.64
AT1G63480.1	Thale cress	nucleus	27.21	31.58
PGSC0003DMT400031843	Potato	plastid	28.88	31.51
CDY34355	Canola	nucleus	28.4	31.48
Os11t0149100-01	Rice	cytosol, nucleus, peroxisome	25.3	28.96
Os08t0118000-01	Rice	nucleus	24.82	27.96
CDY39751	Canola	nucleus	25.3	27.75
CDY46385	Canola	nucleus	25.06	27.49
Os06t0326000-01	Rice	nucleus	23.87	26.45
Os12t0147000-00	Rice	nucleus	23.87	26.25
Os02t0125200-00	Rice	mitochondrion	18.62	21.25

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	EntrezGene:4337449	EMBL:AK060880	EMBL:AK099749	ProteinID:BAF16220.1
ProteinID:BAS91709.1	InterPro:IPR005175	EnsemblPlantsGene:Os04g0683900	EnsemblPlants:Os04t0683900-01	PFAM:PF03479	InterPro:PPC_dom
PFscan:PS51742	PANTHER:PTHR31500	PANTHER:PTHR31500:SF19	UniProt:Q0J8W7	SUPFAM:SSF117856	UniParc:UPI0000DD935A
RefSeq:XP_015635364.1	SEG:seg	:	:	:	:

Description

Protein of unknown function DUF296 domain containing protein. (Os04t0683900-01);Protein of unknown function DUF296 domain containing protein. (Os04t0683900-02);Protein of unknown function DUF296 domain containing protein. (Os04t0683900-03)

Coordinates

chr4:-:34922338..34926223

Molecular Weight (calculated)

42842.7 Da

IEP (calculated)

10.351

GRAVY (calculated)

-0.423

Length

419 amino acids

Sequence
(BLAST)

001: MDGKELLSPS ELSYYAHQQH QHQHQQHQQQ HRMLGGGGGG GGHSASPLAG MHGGPSVIRP MPNMGMSPTA ILQSIGPGPL AGMQFQMDAA PPPPPLMHNS
101: MASVSASAGA GSPTVPPSAT PMEPVKRKRG RPRKYGPDGT MKVSTAAAAQ HQQQMLSAPP RMGSVSGADM VGGGSGMDDS AQKKRRGRPP GTGKKQQLSS
201: PVKLSGGNAF SGSAGTSFTP HIITASPSED VAGKIVAFAN HSSRAVCVLS ATGSVSRVVL RHPADGAMSR VHASSHYKNP AIYEGLYEIL SMSGCYNLMN
301: EGQSDGLSVT LCSPERHIIG GVLGGALVAA STVQVVLGSF VQGGSKPKSK KAGKQQQQQA AAAAFSSDSL TGGGQDASPS SGHNQNLTPP PPVTTTGGWP
401: SSGIFDTRSS NIDINSSRG

Best Arabidopsis Sequence Match ( AT2G45850.1 )
(BLAST)

001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG

Arabidopsis Description

AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.