Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007595.1-P | Field mustard | nucleus | 96.51 | 97.36 |
| CDX71746 | Canola | nucleus | 95.06 | 95.06 |
| CDY42495 | Canola | nucleus | 83.43 | 84.91 |
| CDX89109 | Canola | nucleus | 81.1 | 83.28 |
| CDY51561 | Canola | nucleus | 76.45 | 77.35 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 79.36 | 77.12 |
| CDY58791 | Canola | nucleus | 73.26 | 76.83 |
| CDY37070 | Canola | nucleus | 67.73 | 68.33 |
| CDY27354 | Canola | nucleus | 69.19 | 68.19 |
| KRH65066 | Soybean | nucleus | 53.49 | 54.12 |
| KRH48165 | Soybean | nucleus | 52.62 | 53.24 |
| VIT_15s0046g02930.t01 | Wine grape | nucleus, plastid | 53.2 | 53.04 |
| KRH40471 | Soybean | nucleus | 52.33 | 52.79 |
| KRH00715 | Soybean | nucleus | 52.03 | 52.34 |
| Solyc01g094460.2.1 | Tomato | nucleus | 46.51 | 47.2 |
| PGSC0003DMT400000467 | Potato | nucleus | 46.51 | 47.2 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 45.64 | 47.15 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 44.48 | 44.22 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 24.13 | 42.35 |
| GSMUA_Achr11P... | Banana | nucleus | 45.35 | 42.05 |
| GSMUA_Achr11P... | Banana | nucleus | 44.77 | 41.07 |
| CDY25500 | Canola | nucleus | 43.31 | 40.27 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 42.15 | 40.06 |
| CDY45364 | Canola | nucleus | 42.73 | 40.05 |
| CDY34355 | Canola | nucleus | 43.31 | 39.42 |
| CDX84679 | Canola | nucleus | 28.78 | 37.79 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 28.78 | 37.79 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 35.76 | 37.73 |
| HORVU2Hr1G123730.3 | Barley | plastid | 22.97 | 37.62 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 31.98 | 35.83 |
| CDY46385 | Canola | nucleus | 39.53 | 35.6 |
| CDY39751 | Canola | nucleus | 39.24 | 35.34 |
| Zm00001d018515_P002 | Maize | nucleus | 38.95 | 34.54 |
| Os02t0824300-01 | Rice | nucleus | 38.95 | 34.01 |
| CDY01503 | Canola | cytosol | 25.58 | 33.98 |
| CDX82971 | Canola | plastid | 20.93 | 33.49 |
| OQU85994 | Sorghum | nucleus | 38.66 | 33.17 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 38.37 | 33.0 |
| CDY07239 | Canola | plasma membrane | 22.09 | 32.9 |
| CDX98767 | Canola | nucleus | 31.1 | 32.52 |
| CDY47428 | Canola | nucleus | 29.07 | 32.36 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 30.81 | 32.22 |
| CDY41028 | Canola | nucleus, plastid | 22.97 | 31.85 |
| CDY04392 | Canola | nucleus | 24.42 | 31.34 |
| CDY26692 | Canola | nucleus | 27.33 | 31.02 |
| CDY07238 | Canola | nucleus | 28.49 | 31.01 |
| CDY41291 | Canola | nucleus | 27.33 | 30.82 |
| CDY26694 | Canola | cytosol, plastid | 22.67 | 29.77 |
| Zm00001d026652_P001 | Maize | plastid | 34.3 | 29.72 |
| CDY26693 | Canola | plastid | 23.26 | 29.63 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 33.43 | 28.47 |
| CDY68252 | Canola | nucleus | 24.42 | 28.28 |
| KXG27470 | Sorghum | nucleus | 34.3 | 28.23 |
| CDY03203 | Canola | nucleus | 29.36 | 28.21 |
| CDY41027 | Canola | cytosol | 21.8 | 28.2 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 32.85 | 28.04 |
| CDY35172 | Canola | nucleus | 28.49 | 27.76 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 32.56 | 27.65 |
| CDX78814 | Canola | nucleus | 32.27 | 27.27 |
| CDY01506 | Canola | nucleus | 23.84 | 27.24 |
| CDY52506 | Canola | nucleus | 27.62 | 27.22 |
| CDY37704 | Canola | nucleus | 29.65 | 27.2 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 37.21 | 27.18 |
| CDY08882 | Canola | nucleus | 34.3 | 27.13 |
| CDY26691 | Canola | cytosol, plastid | 24.42 | 27.01 |
| Os04t0683900-01 | Rice | nucleus | 32.85 | 26.97 |
| CDX76549 | Canola | nucleus | 34.3 | 26.82 |
| CDY05594 | Canola | nucleus | 27.62 | 26.69 |
| CDY44500 | Canola | nucleus | 32.27 | 26.43 |
| Zm00001d001784_P002 | Maize | nucleus | 33.14 | 26.21 |
| CDY21122 | Canola | nucleus | 29.36 | 26.17 |
| HORVU7Hr1G122340.3 | Barley | nucleus | 26.45 | 26.07 |
| CDY30005 | Canola | nucleus | 28.78 | 25.98 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 39.83 | 25.8 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 29.65 | 25.63 |
| CDX94457 | Canola | nucleus | 27.91 | 25.4 |
| CDX92693 | Canola | nucleus | 29.07 | 25.25 |
| CDY49703 | Canola | nucleus | 29.07 | 25.06 |
| CDY38874 | Canola | nucleus | 30.81 | 25.06 |
| CDX89422 | Canola | nucleus | 27.91 | 25.0 |
| CDY32624 | Canola | nucleus | 30.23 | 24.53 |
| CDY16785 | Canola | nucleus | 27.91 | 24.49 |
| CDX87241 | Canola | nucleus | 27.62 | 24.3 |
| CDY00488 | Canola | nucleus | 30.23 | 24.24 |
| CDY52477 | Canola | nucleus | 25.87 | 24.18 |
| CDY65097 | Canola | nucleus | 29.36 | 24.11 |
| CDY65362 | Canola | nucleus | 25.87 | 23.92 |
| CDX91598 | Canola | nucleus | 28.78 | 23.63 |
| CDX99902 | Canola | nucleus | 29.94 | 23.46 |
| CDY00271 | Canola | nucleus | 27.03 | 23.08 |
| CDX86910 | Canola | nucleus | 26.45 | 22.81 |
| CDY30710 | Canola | nucleus | 25.87 | 22.19 |
| CDY13231 | Canola | nucleus | 26.16 | 21.95 |
Protein Annotations
| MapMan:35.1 | GO:A0A078IIJ5 | UniProt:A0A078IIJ5 | InterPro:AT_hook_DNA-bd_motif | EnsemblPlants:CDY48928 | ProteinID:CDY48928 |
| ProteinID:CDY48928.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00092015001 |
| InterPro:IPR005175 | PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF44 |
| SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI0004EF328B | SEG:seg | : | : |
Description
BnaA09g39090DBnaA09g39090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIJ5]
Coordinates
chrLK032801:+:86732..88673
Molecular Weight (calculated)
35871.0 Da
IEP (calculated)
9.599
GRAVY (calculated)
-0.580
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRREAMSGS YYIQRGMPGS APPPPQTQQP FHGSQGFHHF SNPNSPFVSN PNLNQVGGGG GGGGSTAFVS PPLPIESSPA DSSAPAAAPP PPQSGEKRKR
101: GRPRKYGQEG PVSLALSPSM SPNSNKRGRG RPPGSGKKQR LGSTGELMPS SSGMSFTPHV IAVSVGEDIA SKVLSFSQQG PRATCVLSVS GAVSTATILQ
201: PSPSQGAIKY EGRFELLSLS ISYLNATEND YSNRTGNLSV SLASPDGRVT GGGIGGPLIA ASPVQVIVGS FLWAVPKGKV KKRDEASEDV QDTDGLENND
301: NNTAPTSPPQ QSQNLDQTPV GMWSTGSRSM DMHHAHMDID LMRG
101: GRPRKYGQEG PVSLALSPSM SPNSNKRGRG RPPGSGKKQR LGSTGELMPS SSGMSFTPHV IAVSVGEDIA SKVLSFSQQG PRATCVLSVS GAVSTATILQ
201: PSPSQGAIKY EGRFELLSLS ISYLNATEND YSNRTGNLSV SLASPDGRVT GGGIGGPLIA ASPVQVIVGS FLWAVPKGKV KKRDEASEDV QDTDGLENND
301: NNTAPTSPPQ QSQNLDQTPV GMWSTGSRSM DMHHAHMDID LMRG
001: MDRRDAMALS GSGSYYIQRG IPGSGPPPPQ TQPTFHGSQG FHHFTNSISP FGSNPNPNPN PGGVSTGFVS PPLPVDSSPA DSSAAAAGAL VAPPSGDTSV
101: KRKRGRPRKY GQDGGSVSLA LSPSISNVSP NSNKRGRGRP PGSGKKQRLS SIGEMMPSST GMSFTPHVIV VSIGEDIASK VISFSHQGPR AICVLSASGA
201: VSTATLLQPA PSHGTIIYEG LFELISLSTS YLNTTDNDYP NRTGSLAVSL ASPDGRVIGG GIGGPLIAAS QVQVIVGSFI WAIPKGKIKK REETSEDVQD
301: TDALENNNDN TAATSPPVPQ QSQNIVQTPV GIWSTGSRSM DMHHPHMDID LMRG
101: KRKRGRPRKY GQDGGSVSLA LSPSISNVSP NSNKRGRGRP PGSGKKQRLS SIGEMMPSST GMSFTPHVIV VSIGEDIASK VISFSHQGPR AICVLSASGA
201: VSTATLLQPA PSHGTIIYEG LFELISLSTS YLNTTDNDYP NRTGSLAVSL ASPDGRVIGG GIGGPLIAAS QVQVIVGSFI WAIPKGKIKK REETSEDVQD
301: TDALENNNDN TAATSPPVPQ QSQNIVQTPV GIWSTGSRSM DMHHPHMDID LMRG
Arabidopsis Description
AHL11AT-hook motif nuclear-localized protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7L5]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.