Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52477 | Canola | nucleus | 97.85 | 98.91 |
| Bra009999.1-P | Field mustard | nucleus | 98.66 | 98.66 |
| CDY05594 | Canola | nucleus | 81.18 | 84.83 |
| CDY52506 | Canola | nucleus | 77.96 | 83.09 |
| AT5G28590.1 | Thale cress | mitochondrion | 43.01 | 74.07 |
| CDY21122 | Canola | nucleus | 61.83 | 59.59 |
| CDY13231 | Canola | nucleus | 65.32 | 59.27 |
| CDY30005 | Canola | nucleus | 60.48 | 59.06 |
| KRH68809 | Soybean | nucleus | 44.89 | 48.27 |
| VIT_14s0081g00620.t01 | Wine grape | nucleus | 44.35 | 46.22 |
| KRG97062 | Soybean | nucleus | 44.62 | 45.98 |
| PGSC0003DMT400073848 | Potato | nucleus | 40.05 | 45.15 |
| Solyc11g006190.1.1 | Tomato | nucleus | 39.52 | 43.62 |
| CDX84679 | Canola | nucleus | 23.92 | 33.97 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 23.92 | 33.97 |
| CDY01503 | Canola | cytosol | 20.43 | 29.34 |
| CDY07239 | Canola | plasma membrane | 18.01 | 29.0 |
| CDY26693 | Canola | plastid | 20.97 | 28.89 |
| CDY41027 | Canola | cytosol | 19.89 | 27.82 |
| CDY68252 | Canola | nucleus | 22.04 | 27.61 |
| CDY37070 | Canola | nucleus | 25.0 | 27.27 |
| CDY47428 | Canola | nucleus | 22.58 | 27.18 |
| CDY41028 | Canola | nucleus, plastid | 18.01 | 27.02 |
| CDY07238 | Canola | nucleus | 22.85 | 26.9 |
| CDY26692 | Canola | nucleus | 21.77 | 26.73 |
| CDY26694 | Canola | cytosol, plastid | 18.82 | 26.72 |
| CDY42495 | Canola | nucleus | 23.92 | 26.33 |
| CDX89109 | Canola | nucleus | 23.66 | 26.27 |
| CDY01506 | Canola | nucleus | 21.24 | 26.25 |
| CDY25500 | Canola | nucleus | 26.08 | 26.22 |
| CDY27354 | Canola | nucleus | 24.46 | 26.07 |
| CDY48928 | Canola | nucleus | 23.92 | 25.87 |
| CDX71746 | Canola | nucleus | 23.92 | 25.87 |
| CDY04392 | Canola | nucleus | 18.55 | 25.75 |
| CDX98767 | Canola | nucleus | 22.58 | 25.53 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 24.73 | 25.41 |
| CDY26691 | Canola | cytosol, plastid | 21.24 | 25.4 |
| CDY58791 | Canola | nucleus | 22.31 | 25.3 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 22.31 | 25.23 |
| CDY34355 | Canola | nucleus | 25.54 | 25.13 |
| CDX92693 | Canola | nucleus | 26.61 | 25.0 |
| CDX94457 | Canola | nucleus | 25.27 | 24.87 |
| CDY49703 | Canola | nucleus | 26.61 | 24.81 |
| CDY45364 | Canola | nucleus | 24.46 | 24.8 |
| CDY51561 | Canola | nucleus | 22.31 | 24.41 |
| CDY35172 | Canola | nucleus | 23.12 | 24.36 |
| CDX89422 | Canola | nucleus | 25.0 | 24.22 |
| CDY03203 | Canola | nucleus | 23.12 | 24.02 |
| CDY37704 | Canola | nucleus | 23.92 | 23.73 |
| CDX82971 | Canola | plastid | 13.71 | 23.72 |
| CDY41291 | Canola | nucleus | 19.35 | 23.61 |
| CDX78814 | Canola | nucleus | 25.54 | 23.34 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 24.73 | 23.12 |
| CDY38874 | Canola | nucleus | 26.08 | 22.93 |
| CDY39751 | Canola | nucleus | 23.12 | 22.51 |
| CDY16785 | Canola | nucleus | 23.66 | 22.45 |
| CDY32624 | Canola | nucleus | 25.54 | 22.41 |
| CDY44500 | Canola | nucleus | 25.27 | 22.38 |
| CDY46385 | Canola | nucleus | 22.85 | 22.25 |
| CDX87241 | Canola | nucleus | 23.12 | 21.99 |
| CDY65097 | Canola | nucleus | 24.46 | 21.72 |
| CDY30710 | Canola | nucleus | 23.39 | 21.7 |
| CDY00488 | Canola | nucleus | 25.0 | 21.68 |
| CDX91598 | Canola | nucleus | 24.19 | 21.48 |
| CDX99902 | Canola | nucleus | 25.27 | 21.41 |
| CDY08882 | Canola | nucleus | 25.0 | 21.38 |
| CDX86910 | Canola | nucleus | 22.85 | 21.3 |
| CDX76549 | Canola | nucleus | 25.0 | 21.14 |
| CDY00271 | Canola | nucleus | 22.85 | 21.09 |
Protein Annotations
| EnsemblPlants:CDY65362 | EnsemblPlantsGene:GSBRNA2T00045696001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF22 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY65362 | ProteinID:CDY65362.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EEB7A4 | UniProt:A0A078JJ31 | MapMan:35.1 | : | : |
Description
BnaA06g39570DBnaA06g39570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJ31]
Coordinates
chrLK034756:-:13627..16241
Molecular Weight (calculated)
38840.0 Da
IEP (calculated)
8.939
GRAVY (calculated)
-0.667
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPNERHHQQ QQQQQQQHHH HHLTSPYYHP FHHHNPTTVS AAPPTTSTNN GNLTSPPPSN DGSSSSLPVY PHSVPSSAVT APIDPVKRKR GRPRKYDTPA
101: QALAAKKLAS SASNSSARER REQAAAAGVS PPPSKSGSRK GLSGYVGKTG QSFTPHIVSI TPGEDVAQKI ILFAEQSKHE ICILSASGAI SSASLSHIAT
201: GTSVSYQGQY EILSLSGSYI RSEHGGKTGG LSICLSGSDG QIIGGRVGGL LKAAGPVQVI VGTFQLEKKK DGGNDVKGDD ASGSGSLLPS PSGGTESMHV
301: YHPSMESSGR NLNNEHHTMT SGGALGGGGA HFMMQPPQGM HMSHARPSEW GGAGYDLSGM RGNGSSENGD YE
101: QALAAKKLAS SASNSSARER REQAAAAGVS PPPSKSGSRK GLSGYVGKTG QSFTPHIVSI TPGEDVAQKI ILFAEQSKHE ICILSASGAI SSASLSHIAT
201: GTSVSYQGQY EILSLSGSYI RSEHGGKTGG LSICLSGSDG QIIGGRVGGL LKAAGPVQVI VGTFQLEKKK DGGNDVKGDD ASGSGSLLPS PSGGTESMHV
301: YHPSMESSGR NLNNEHHTMT SGGALGGGGA HFMMQPPQGM HMSHARPSEW GGAGYDLSGM RGNGSSENGD YE
001: MDPNESHHHH QQQQLHHLHQ QQQQQQQQQR LTSPYFHHQL QHHHHLPTTV ATTASTGNAV PSSNNGLFPP QPQPQHQPND GSSSLAVYPH SVPSSAVTAP
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGSRLTSP VSSGQLLGMG FPPGMESTGR NPMRGNDEQH DHHHHQAGLG GPHHFMMQAP QGIHMTHSRP SEWRGGGNSG HDGRGGGGYD LSGRIGHESS
401: ENGDYEQQIP D
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGSRLTSP VSSGQLLGMG FPPGMESTGR NPMRGNDEQH DHHHHQAGLG GPHHFMMQAP QGIHMTHSRP SEWRGGGNSG HDGRGGGGYD LSGRIGHESS
401: ENGDYEQQIP D
Arabidopsis Description
AHL14AT-hook motif nuclear-localized protein 14 [Source:UniProtKB/Swiss-Prot;Acc:A1L4X7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.