Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35172 | Canola | nucleus | 93.85 | 95.18 |
| AT5G46640.1 | Thale cress | nucleus | 65.92 | 61.14 |
| CDX78814 | Canola | nucleus | 58.38 | 51.35 |
| CDY44500 | Canola | nucleus | 58.94 | 50.24 |
| CDY08882 | Canola | nucleus | 59.78 | 49.2 |
| CDX76549 | Canola | nucleus | 59.78 | 48.64 |
| CDY01503 | Canola | cytosol | 33.8 | 46.72 |
| CDY26694 | Canola | cytosol, plastid | 32.68 | 44.66 |
| CDY26693 | Canola | plastid | 33.52 | 44.44 |
| CDY41027 | Canola | cytosol | 32.96 | 44.36 |
| CDY01506 | Canola | nucleus | 35.47 | 42.19 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 30.73 | 41.98 |
| CDX84679 | Canola | nucleus | 30.45 | 41.6 |
| CDY26692 | Canola | nucleus | 34.64 | 40.92 |
| CDY68252 | Canola | nucleus | 33.8 | 40.74 |
| Os10t0572900-02 | Rice | nucleus | 28.21 | 40.24 |
| VIT_02s0012g00900.t01 | Wine grape | nucleus | 39.66 | 40.23 |
| CDY41028 | Canola | nucleus, plastid | 27.65 | 39.92 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 20.67 | 38.95 |
| CDY26691 | Canola | cytosol, plastid | 32.68 | 37.62 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 35.75 | 36.36 |
| KRH58200 | Soybean | nucleus | 36.31 | 35.91 |
| HORVU2Hr1G105800.13 | Barley | cytosol, vacuole | 30.73 | 35.83 |
| Solyc04g053090.1.1 | Tomato | plastid | 16.76 | 35.5 |
| KRH04337 | Soybean | nucleus | 34.92 | 35.11 |
| Solyc04g053100.1.1 | Tomato | plastid | 15.64 | 33.73 |
| KRH28286 | Soybean | plastid | 31.84 | 33.63 |
| OQU82226 | Sorghum | plastid | 32.12 | 33.14 |
| KRH77206 | Soybean | nucleus | 31.01 | 32.84 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 32.68 | 32.77 |
| Os04t0589900-01 | Rice | nucleus | 34.64 | 32.72 |
| PGSC0003DMT400052826 | Potato | nucleus | 31.28 | 31.11 |
| CDY42495 | Canola | nucleus | 29.05 | 30.77 |
| HORVU7Hr1G065300.2 | Barley | mitochondrion, plastid | 16.2 | 30.69 |
| CDY37704 | Canola | nucleus | 31.84 | 30.4 |
| Zm00001d026036_P001 | Maize | nucleus | 34.08 | 30.35 |
| CDY37070 | Canola | nucleus | 28.21 | 29.62 |
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 34.08 | 29.61 |
| CDX89109 | Canola | nucleus | 27.65 | 29.55 |
| TraesCS2A01G449500.1 | Wheat | plastid | 33.8 | 29.51 |
| Zm00001d030053_P003 | Maize | plastid | 34.36 | 29.5 |
| CDY07238 | Canola | nucleus | 25.98 | 29.43 |
| CDY48928 | Canola | nucleus | 28.21 | 29.36 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 33.52 | 29.13 |
| CDY51561 | Canola | nucleus | 27.65 | 29.12 |
| KXG38867 | Sorghum | plastid | 34.36 | 29.08 |
| CDY27354 | Canola | nucleus | 28.21 | 28.94 |
| CDX71746 | Canola | nucleus | 27.65 | 28.78 |
| CDY07239 | Canola | plasma membrane | 18.44 | 28.57 |
| Zm00001d047042_P004 | Maize | cytosol, nucleus, plasma membrane | 34.08 | 28.44 |
| CDY04392 | Canola | nucleus | 21.23 | 28.36 |
| CDY58791 | Canola | nucleus | 25.98 | 28.35 |
| CDY47428 | Canola | nucleus | 24.3 | 28.16 |
| Solyc08g006950.2.1 | Tomato | nucleus | 30.45 | 27.88 |
| TraesCS1B01G206100.2 | Wheat | nucleus | 34.64 | 27.49 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 30.45 | 27.39 |
| TraesCS1D01G194900.2 | Wheat | nucleus | 34.64 | 27.31 |
| TraesCS1A01G190900.1 | Wheat | nucleus | 34.64 | 27.31 |
| CDY25500 | Canola | nucleus | 27.65 | 26.76 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 24.58 | 26.75 |
| HORVU1Hr1G049980.12 | Barley | nucleus | 34.64 | 26.72 |
| CDY41291 | Canola | nucleus | 22.63 | 26.56 |
| CDX98767 | Canola | nucleus | 24.3 | 26.44 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 26.54 | 26.24 |
| CDY45364 | Canola | nucleus | 26.82 | 26.16 |
| CDY34355 | Canola | nucleus | 27.09 | 25.66 |
| CDX82971 | Canola | plastid | 15.08 | 25.12 |
| CDY16785 | Canola | nucleus | 26.26 | 23.98 |
| CDX94457 | Canola | nucleus | 24.86 | 23.55 |
| CDX87241 | Canola | nucleus | 25.7 | 23.53 |
| CDY52477 | Canola | nucleus | 24.02 | 23.37 |
| CDY05594 | Canola | nucleus | 23.18 | 23.31 |
| CDY52506 | Canola | nucleus | 22.63 | 23.21 |
| CDY65362 | Canola | nucleus | 24.02 | 23.12 |
| CDX86910 | Canola | nucleus | 25.7 | 23.06 |
| CDY00271 | Canola | nucleus | 25.7 | 22.83 |
| CDY39751 | Canola | nucleus | 24.3 | 22.77 |
| CDY46385 | Canola | nucleus | 24.02 | 22.51 |
| CDX92693 | Canola | nucleus | 24.86 | 22.47 |
| CDY30710 | Canola | nucleus | 25.14 | 22.44 |
| CDX89422 | Canola | nucleus | 24.02 | 22.4 |
| CDY49703 | Canola | nucleus | 24.86 | 22.31 |
| CDY21122 | Canola | nucleus | 24.02 | 22.28 |
| CDY38874 | Canola | nucleus | 26.26 | 22.22 |
| CDY32624 | Canola | nucleus | 26.26 | 22.17 |
| CDY30005 | Canola | nucleus | 23.46 | 22.05 |
| CDX91598 | Canola | nucleus | 25.14 | 21.48 |
| CDY65097 | Canola | nucleus | 25.14 | 21.48 |
| CDY00488 | Canola | nucleus | 25.42 | 21.21 |
| CDX99902 | Canola | nucleus | 25.14 | 20.5 |
| CDY13231 | Canola | nucleus | 22.07 | 19.27 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | GO:A0A078EUD8 | InterPro:AT_hook_DNA-bd_motif | EnsemblPlants:CDY03203 | ProteinID:CDY03203 |
| ProteinID:CDY03203.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00115705001 |
| InterPro:IPR005175 | PFAM:PF03479 | InterPro:PPC_dom | PRINTS:PR00929 | PFscan:PS51742 | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF17 | SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI0004EF0E7F | SEG:seg | : |
Description
BnaC09g19530D
Coordinates
chrLK031941:-:714873..716468
Molecular Weight (calculated)
38281.8 Da
IEP (calculated)
9.878
GRAVY (calculated)
-0.641
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSRDITQTQ HQQFQPPLFH YPNFNTGAMM GPNSTSQSIN HRLTFGSLTP RGTLQQQEQQ MDQKTLESLG YVDEVSPSSQ PMRSGIDQNQ QQVKRKRGRP
101: RKYAPDGTIA LGLAPTSPLG GDGDSGRVNT NSAKRARGRP PGSIKKQFDA LGTSGGMFTP HVIEVKEGEE ILSKVAALSN QGPRTVSVLS AAGAVSRVIL
201: HNPSGIHNYK GRFEIVTLSG SFSNYEVNGS IERTGSLTVV LAGPNAQILG GLVGRLVAVT PVQIIVGSFV DEAKKLKQST GNNAQGQNPE PASAPANMLN
301: FGSNSQGPSS ESSDGNESGS PSVQHHDNNN NGIYGNSMAQ QQQLRQMQMY NLWPSSGQ
101: RKYAPDGTIA LGLAPTSPLG GDGDSGRVNT NSAKRARGRP PGSIKKQFDA LGTSGGMFTP HVIEVKEGEE ILSKVAALSN QGPRTVSVLS AAGAVSRVIL
201: HNPSGIHNYK GRFEIVTLSG SFSNYEVNGS IERTGSLTVV LAGPNAQILG GLVGRLVAVT PVQIIVGSFV DEAKKLKQST GNNAQGQNPE PASAPANMLN
301: FGSNSQGPSS ESSDGNESGS PSVQHHDNNN NGIYGNSMAQ QQQLRQMQMY NLWPSSGQ
001: MDSRDIPPSH NQLQPPPGML MSHYRNPNAA ASPLMVPTST SQPIQHPRLP FGNQQQSQTF HQQQQQQMDQ KTLESLGFGD GSPSSQPMRF GIDDQNQQLQ
101: VKKKRGRPRK YTPDGSIALG LAPTSPLLSA ASNSYGEGGV GDSGGNGNSV DPPVKRNRGR PPGSSKKQLD ALGGTSGVGF TPHVIEVNTG EDIASKVMAF
201: SDQGSRTICI LSASGAVSRV MLRQASHSSG IVTYEGRFEI ITLSGSVLNY EVNGSTNRSG NLSVALAGPD GGIVGGSVVG NLVAATQVQV IVGSFVAEAK
301: KPKQSSVNIA RGQNPEPASA PANMLNFGSV SQGPSSESSE ENESGSPAMH RDNNNGIYGA QQQQQQQPLH PHQMQMYQHL WSNHGQ
101: VKKKRGRPRK YTPDGSIALG LAPTSPLLSA ASNSYGEGGV GDSGGNGNSV DPPVKRNRGR PPGSSKKQLD ALGGTSGVGF TPHVIEVNTG EDIASKVMAF
201: SDQGSRTICI LSASGAVSRV MLRQASHSSG IVTYEGRFEI ITLSGSVLNY EVNGSTNRSG NLSVALAGPD GGIVGGSVVG NLVAATQVQV IVGSFVAEAK
301: KPKQSSVNIA RGQNPEPASA PANMLNFGSV SQGPSSESSE ENESGSPAMH RDNNNGIYGA QQQQQQQPLH PHQMQMYQHL WSNHGQ
Arabidopsis Description
AHL8AT-hook motif nuclear-localized protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIR1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.