Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00271 | Canola | nucleus | 96.99 | 96.03 |
| CDY16785 | Canola | nucleus | 83.46 | 84.95 |
| CDX87241 | Canola | nucleus | 82.96 | 84.65 |
| CDY30710 | Canola | nucleus | 78.7 | 78.3 |
| AT5G62260.3 | Thale cress | nucleus | 79.2 | 78.22 |
| KRH34345 | Soybean | nucleus | 36.09 | 43.64 |
| KRG92455 | Soybean | nucleus | 35.34 | 42.73 |
| CDY07239 | Canola | plasma membrane | 24.56 | 42.42 |
| KRH09229 | Soybean | nucleus | 36.34 | 42.15 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 36.84 | 41.88 |
| Solyc03g007150.2.1 | Tomato | nucleus | 33.83 | 41.54 |
| CDX94457 | Canola | nucleus | 39.35 | 41.53 |
| CDX89422 | Canola | nucleus | 39.6 | 41.15 |
| CDY38874 | Canola | nucleus | 43.61 | 41.13 |
| KRH38723 | Soybean | nucleus | 35.34 | 40.99 |
| CDY32624 | Canola | nucleus | 43.36 | 40.8 |
| CDY00488 | Canola | nucleus | 43.11 | 40.09 |
| PGSC0003DMT400071865 | Potato | plastid | 30.83 | 39.94 |
| CDX92693 | Canola | nucleus | 39.6 | 39.9 |
| CDY49703 | Canola | nucleus | 39.35 | 39.35 |
| CDY07238 | Canola | nucleus | 31.08 | 39.24 |
| CDY04392 | Canola | nucleus | 26.07 | 38.81 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 32.58 | 38.69 |
| PGSC0003DMT400079651 | Potato | nucleus | 33.33 | 38.44 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 24.81 | 37.79 |
| CDX84679 | Canola | nucleus | 24.81 | 37.79 |
| Solyc06g035430.2.1 | Tomato | nucleus | 32.58 | 37.57 |
| CDY47428 | Canola | nucleus | 29.07 | 37.54 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 35.84 | 37.53 |
| CDY65097 | Canola | nucleus | 39.35 | 37.47 |
| CDX91598 | Canola | nucleus | 39.35 | 37.47 |
| Os08t0118000-01 | Rice | nucleus | 34.84 | 37.37 |
| CDX99902 | Canola | nucleus | 41.1 | 37.36 |
| CDY41291 | Canola | nucleus | 27.57 | 36.07 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 34.34 | 35.86 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 29.07 | 35.26 |
| CDX98767 | Canola | nucleus | 28.82 | 34.95 |
| KXG24283 | Sorghum | plastid | 34.09 | 34.61 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 33.58 | 34.36 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 33.58 | 34.27 |
| CDX82971 | Canola | plastid | 18.3 | 33.95 |
| TraesCS7B01G215600.1 | Wheat | plastid | 33.33 | 33.76 |
| HORVU7Hr1G075040.1 | Barley | plastid | 32.83 | 33.33 |
| TraesCS7D01G312100.1 | Wheat | plastid | 33.08 | 33.25 |
| TraesCS7A01G315100.1 | Wheat | plastid | 32.83 | 32.91 |
| CDY01503 | Canola | cytosol | 20.55 | 31.66 |
| CDY41027 | Canola | cytosol | 19.05 | 28.57 |
| CDY25500 | Canola | nucleus | 26.32 | 28.38 |
| CDY26694 | Canola | cytosol, plastid | 18.55 | 28.24 |
| CDY37704 | Canola | nucleus | 26.32 | 28.0 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 25.31 | 27.9 |
| CDY26693 | Canola | plastid | 18.8 | 27.78 |
| CDX89109 | Canola | nucleus | 23.31 | 27.76 |
| CDY42495 | Canola | nucleus | 23.31 | 27.51 |
| CDY34355 | Canola | nucleus | 26.07 | 27.51 |
| CDY58791 | Canola | nucleus | 22.56 | 27.44 |
| CDY41028 | Canola | nucleus, plastid | 17.04 | 27.42 |
| CDY45364 | Canola | nucleus | 25.06 | 27.25 |
| CDY51561 | Canola | nucleus | 23.06 | 27.06 |
| CDY37070 | Canola | nucleus | 23.06 | 26.98 |
| CDY27354 | Canola | nucleus | 23.31 | 26.65 |
| CDX71746 | Canola | nucleus | 22.81 | 26.45 |
| CDY48928 | Canola | nucleus | 22.81 | 26.45 |
| CDY35172 | Canola | nucleus | 23.31 | 26.35 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 26.07 | 26.13 |
| CDY01506 | Canola | nucleus | 19.55 | 25.91 |
| CDY03203 | Canola | nucleus | 23.06 | 25.7 |
| CDX78814 | Canola | nucleus | 26.07 | 25.55 |
| CDY26692 | Canola | nucleus | 19.3 | 25.41 |
| CDY68252 | Canola | nucleus | 18.8 | 25.25 |
| CDY44500 | Canola | nucleus | 26.07 | 24.76 |
| CDY26691 | Canola | cytosol, plastid | 19.3 | 24.76 |
| CDY39751 | Canola | nucleus | 23.56 | 24.61 |
| CDY08882 | Canola | nucleus | 26.32 | 24.14 |
| CDX76549 | Canola | nucleus | 26.57 | 24.09 |
| CDY46385 | Canola | nucleus | 23.06 | 24.08 |
| CDY52506 | Canola | nucleus | 20.3 | 23.21 |
| CDY05594 | Canola | nucleus | 20.55 | 23.03 |
| CDY65362 | Canola | nucleus | 21.3 | 22.85 |
| CDY52477 | Canola | nucleus | 21.05 | 22.83 |
| CDY30005 | Canola | nucleus | 21.55 | 22.57 |
| CDY21122 | Canola | nucleus | 21.8 | 22.54 |
| CDY13231 | Canola | nucleus | 21.3 | 20.73 |
Protein Annotations
| EnsemblPlants:CDX86910 | EnsemblPlantsGene:GSBRNA2T00145710001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF18 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDX86910 | ProteinID:CDX86910.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EEA0A4 | MapMan:35.1 | : | : | : |
Description
BnaC03g51800D
Coordinates
chrLK031848:-:221137..223714
Molecular Weight (calculated)
41893.1 Da
IEP (calculated)
8.748
GRAVY (calculated)
-0.543
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDKSGISPS GVITVKGDEA LASRTEFQQS PSFLQFVSPT TVVTPPPPPA STTVNPGPAA VPPPLSSAGS DLTKKKRGRP RKYAPDGSLN PRASRPTLSP
101: TPISSSIPFS GDYNHHSHWK RGKAQQQQQH VDIIKKSHNF HEYGSSPAPP PPPPPGLSCY VGANFTTHQF TVNAGEDVTM KVMPYSQGSR AICILSATGC
201: ISNVTLRQAT TSGGTLTYEG RFEILSLSGS FMPTENGGTK GRSGGMSISL AGPNGKIIGG GLAGMLIAAG PVQVVMGSFI VMHQAEQTQK KKPRIIEASP
301: PPQQRPPPGF TITTVNSTSP LVATVEEPKQ QTYGGGGGIM RPISQMPSSF NNDNSGMNNF TTTFQGYGNV NTGTNKDEDD YDDGGDDDSG DTRSLSTSG
101: TPISSSIPFS GDYNHHSHWK RGKAQQQQQH VDIIKKSHNF HEYGSSPAPP PPPPPGLSCY VGANFTTHQF TVNAGEDVTM KVMPYSQGSR AICILSATGC
201: ISNVTLRQAT TSGGTLTYEG RFEILSLSGS FMPTENGGTK GRSGGMSISL AGPNGKIIGG GLAGMLIAAG PVQVVMGSFI VMHQAEQTQK KKPRIIEASP
301: PPQQRPPPGF TITTVNSTSP LVATVEEPKQ QTYGGGGGIM RPISQMPSSF NNDNSGMNNF TTTFQGYGNV NTGTNKDEDD YDDGGDDDSG DTRSLSTSG
001: MEEKGEISPS GVVTVKGDEA LVPRTEFQQN PSFLQFVSPT TVVTPLPPPP APSSAPVPTT VTPGSATAST GSDPTKKKRG RPRKYAPDGS LNPRFLRPTL
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
Arabidopsis Description
AHL6AT-hook motif nuclear-localized protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.