Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022555.1-P | Field mustard | nucleus | 98.57 | 98.57 |
| CDX91598 | Canola | nucleus | 92.84 | 92.84 |
| CDY32624 | Canola | nucleus | 77.33 | 76.42 |
| CDY00488 | Canola | nucleus | 78.04 | 76.22 |
| CDY38874 | Canola | nucleus | 76.85 | 76.12 |
| CDX99902 | Canola | nucleus | 75.42 | 71.98 |
| AT5G51590.1 | Thale cress | nucleus | 71.84 | 71.84 |
| CDX92693 | Canola | nucleus | 57.28 | 60.61 |
| CDY49703 | Canola | nucleus | 57.28 | 60.15 |
| CDX94457 | Canola | nucleus | 54.18 | 60.05 |
| CDX89422 | Canola | nucleus | 53.22 | 58.07 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 36.52 | 43.59 |
| KRH34345 | Soybean | nucleus | 32.94 | 41.82 |
| Solyc03g007150.2.1 | Tomato | nucleus | 32.22 | 41.54 |
| KRG92455 | Soybean | nucleus | 32.7 | 41.52 |
| CDX84679 | Canola | nucleus | 25.54 | 40.84 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 25.54 | 40.84 |
| KRH09229 | Soybean | nucleus | 32.94 | 40.12 |
| PGSC0003DMT400071865 | Potato | plastid | 29.36 | 39.94 |
| CDY00271 | Canola | nucleus | 38.19 | 39.7 |
| CDY16785 | Canola | nucleus | 36.99 | 39.54 |
| CDX87241 | Canola | nucleus | 36.75 | 39.39 |
| CDX86910 | Canola | nucleus | 37.47 | 39.35 |
| KRH38723 | Soybean | nucleus | 32.22 | 39.24 |
| CDY30710 | Canola | nucleus | 37.47 | 39.15 |
| PGSC0003DMT400079651 | Potato | nucleus | 31.98 | 38.73 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 30.31 | 37.8 |
| CDY07238 | Canola | nucleus | 28.16 | 37.34 |
| CDY07239 | Canola | plasma membrane | 20.53 | 37.23 |
| CDX98767 | Canola | nucleus | 28.88 | 36.78 |
| CDY04392 | Canola | nucleus | 23.39 | 36.57 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 33.17 | 36.48 |
| Solyc06g035430.2.1 | Tomato | nucleus | 30.07 | 36.42 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 28.4 | 36.17 |
| CDY41291 | Canola | nucleus | 26.25 | 36.07 |
| CDY47428 | Canola | nucleus | 26.25 | 35.6 |
| CDX82971 | Canola | plastid | 18.14 | 35.35 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 31.03 | 34.03 |
| Os08t0118000-01 | Rice | nucleus | 28.88 | 32.53 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 30.07 | 32.31 |
| HORVU7Hr1G075040.1 | Barley | plastid | 29.36 | 31.3 |
| TraesCS7B01G215600.1 | Wheat | plastid | 29.36 | 31.22 |
| CDY37704 | Canola | nucleus | 27.92 | 31.2 |
| CDY25500 | Canola | nucleus | 27.45 | 31.08 |
| TraesCS7D01G312100.1 | Wheat | plastid | 29.36 | 30.98 |
| TraesCS7A01G315100.1 | Wheat | plastid | 29.36 | 30.9 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 28.64 | 30.69 |
| KXG24283 | Sorghum | plastid | 28.64 | 30.53 |
| CDY42495 | Canola | nucleus | 24.34 | 30.18 |
| CDX89109 | Canola | nucleus | 24.11 | 30.15 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 26.01 | 30.11 |
| CDY45364 | Canola | nucleus | 26.25 | 29.97 |
| CDY37070 | Canola | nucleus | 24.34 | 29.91 |
| CDY34355 | Canola | nucleus | 26.97 | 29.89 |
| CDY58791 | Canola | nucleus | 23.15 | 29.57 |
| CDX71746 | Canola | nucleus | 24.11 | 29.36 |
| CDY48928 | Canola | nucleus | 24.11 | 29.36 |
| CDY27354 | Canola | nucleus | 24.34 | 29.23 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 27.68 | 29.15 |
| CDY51561 | Canola | nucleus | 23.39 | 28.82 |
| CDY41028 | Canola | nucleus, plastid | 16.95 | 28.63 |
| CDY01503 | Canola | cytosol | 17.42 | 28.19 |
| CDY26692 | Canola | nucleus | 19.81 | 27.39 |
| CDY41027 | Canola | cytosol | 16.71 | 26.32 |
| CDY39751 | Canola | nucleus | 23.63 | 25.92 |
| CDY46385 | Canola | nucleus | 23.63 | 25.92 |
| CDY26694 | Canola | cytosol, plastid | 15.99 | 25.57 |
| CDY26693 | Canola | plastid | 16.47 | 25.56 |
| CDX78814 | Canola | nucleus | 24.58 | 25.31 |
| CDY03203 | Canola | nucleus | 21.48 | 25.14 |
| CDY30005 | Canola | nucleus | 22.67 | 24.93 |
| CDY68252 | Canola | nucleus | 17.66 | 24.92 |
| CDY21122 | Canola | nucleus | 22.91 | 24.87 |
| CDY44500 | Canola | nucleus | 24.82 | 24.76 |
| CDY26691 | Canola | cytosol, plastid | 18.38 | 24.76 |
| CDY05594 | Canola | nucleus | 21.0 | 24.72 |
| CDY35172 | Canola | nucleus | 20.76 | 24.65 |
| CDY08882 | Canola | nucleus | 25.54 | 24.6 |
| CDX76549 | Canola | nucleus | 25.78 | 24.55 |
| CDY65362 | Canola | nucleus | 21.72 | 24.46 |
| CDY52477 | Canola | nucleus | 21.48 | 24.46 |
| CDY52506 | Canola | nucleus | 20.05 | 24.07 |
| CDY01506 | Canola | nucleus | 17.18 | 23.92 |
| CDY13231 | Canola | nucleus | 20.76 | 21.22 |
Protein Annotations
| EnsemblPlants:CDY65097 | EnsemblPlantsGene:GSBRNA2T00044160001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF18 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY65097 | ProteinID:CDY65097.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EEBAFD | UniProt:A0A078JI77 | MapMan:35.1 | : | : |
Description
BnaAnng20150DBnaAnng20150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI77]
Coordinates
chrLK034655:+:9732..12149
Molecular Weight (calculated)
43959.9 Da
IEP (calculated)
4.791
GRAVY (calculated)
-0.515
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEREGTSSN SNSNNNITSF GLNQHVAPPP PNSGVYQMGP PRSENPNPFP AGLPNTNAAS ASASAVAATP PENAAPPFSL TMPVGNSSSE LKMKKRGRPR
101: KYNPDGSLAV TLSPMPISSS VPLTTVFAPP QRGGRGQGRG RERGQARVDP PSNNNRLTNP QMFGFNNSSP VVGTSEVVCA SFTPHVLTVN VGEDVTMKIM
201: TFSQQGSRAI CILSGNGAVS SVTLRQSFTS AGTLTYEGHF EILSLTGSFI TSETGGIRSR AGGISVSLSG PDGHVFGGGL SGLLLAAGPV QVTVGTFEAG
301: KEEPQHQQMQ NLRRERLGIP MTTQDSNISF GGGSAEDPKA RYGLNKPVVI QAPPVSAPPV SLPHEPNTNA AQGYYTNNTA NQIRDLFTSL PGEDDEDFEG
401: EDDDEEFGSD SESDTEVPN
101: KYNPDGSLAV TLSPMPISSS VPLTTVFAPP QRGGRGQGRG RERGQARVDP PSNNNRLTNP QMFGFNNSSP VVGTSEVVCA SFTPHVLTVN VGEDVTMKIM
201: TFSQQGSRAI CILSGNGAVS SVTLRQSFTS AGTLTYEGHF EILSLTGSFI TSETGGIRSR AGGISVSLSG PDGHVFGGGL SGLLLAAGPV QVTVGTFEAG
301: KEEPQHQQMQ NLRRERLGIP MTTQDSNISF GGGSAEDPKA RYGLNKPVVI QAPPVSAPPV SLPHEPNTNA AQGYYTNNTA NQIRDLFTSL PGEDDEDFEG
401: EDDDEEFGSD SESDTEVPN
001: MEEREGTNIN NIPTSFGLKQ HETPLPPPGY PPRSENPNLF PVGQSSTSSA AAAVKPSENV APPFSLTMPV ENSSSELKKK RGRPRKYNPD GSLAVTLSPM
101: PISSSVPLTS EFGSRKRGRG RGRGRGRGRG RGQGQGSREP NNNNNDNNWL KNPQMFEFNN NTPTSGGGGP AEIVSPSFTP HVLTVNAGED VTMKIMTFSQ
201: QGSRAICILS ANGPISNVTL RQSMTSGGTL TYEGHFEILS LTGSFIPSES GGTRSRAGGM SVSLAGQDGR VFGGGLAGLF IAAGPVQVMV GSFIAGQEES
301: QQQQQQIKKQ RRERLGIPTT TQASNISFGG SAEDPKARYG LNKPVVIQPP PVSAPPVSFS HEPSTNTVHG YYANNTANHI KDLFSSLPGE DREEDEDDLE
401: GEDDEEFGGH SESDTEVPS
101: PISSSVPLTS EFGSRKRGRG RGRGRGRGRG RGQGQGSREP NNNNNDNNWL KNPQMFEFNN NTPTSGGGGP AEIVSPSFTP HVLTVNAGED VTMKIMTFSQ
201: QGSRAICILS ANGPISNVTL RQSMTSGGTL TYEGHFEILS LTGSFIPSES GGTRSRAGGM SVSLAGQDGR VFGGGLAGLF IAAGPVQVMV GSFIAGQEES
301: QQQQQQIKKQ RRERLGIPTT TQASNISFGG SAEDPKARYG LNKPVVIQPP PVSAPPVSFS HEPSTNTVHG YYANNTANHI KDLFSSLPGE DREEDEDDLE
401: GEDDEEFGGH SESDTEVPS
Arabidopsis Description
AHL4AT-hook motif nuclear-localized protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.