Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010070.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX86910 | Canola | nucleus | 96.03 | 96.99 |
| CDX87241 | Canola | nucleus | 83.62 | 86.19 |
| CDY16785 | Canola | nucleus | 83.62 | 85.97 |
| CDY30710 | Canola | nucleus | 79.16 | 79.55 |
| AT5G62260.3 | Thale cress | nucleus | 79.16 | 78.96 |
| KRH34345 | Soybean | nucleus | 35.48 | 43.33 |
| CDX94457 | Canola | nucleus | 39.95 | 42.59 |
| KRG92455 | Soybean | nucleus | 34.74 | 42.42 |
| CDX89422 | Canola | nucleus | 40.2 | 42.19 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 36.72 | 42.17 |
| Solyc03g007150.2.1 | Tomato | nucleus | 33.99 | 42.15 |
| CDY38874 | Canola | nucleus | 44.17 | 42.08 |
| CDY07239 | Canola | plasma membrane | 24.07 | 41.99 |
| KRH09229 | Soybean | nucleus | 35.73 | 41.86 |
| CDY32624 | Canola | nucleus | 43.92 | 41.75 |
| CDX92693 | Canola | nucleus | 40.45 | 41.16 |
| KRH38723 | Soybean | nucleus | 34.74 | 40.7 |
| CDY49703 | Canola | nucleus | 40.2 | 40.6 |
| CDY00488 | Canola | nucleus | 42.93 | 40.33 |
| PGSC0003DMT400071865 | Potato | plastid | 30.77 | 40.26 |
| CDY07238 | Canola | nucleus | 31.02 | 39.56 |
| PGSC0003DMT400079651 | Potato | nucleus | 33.5 | 39.02 |
| CDY04392 | Canola | nucleus | 25.81 | 38.81 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 32.01 | 38.39 |
| CDY65097 | Canola | nucleus | 39.7 | 38.19 |
| CDX91598 | Canola | nucleus | 39.45 | 37.95 |
| Solyc06g035430.2.1 | Tomato | nucleus | 32.51 | 37.86 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 35.73 | 37.8 |
| CDX99902 | Canola | nucleus | 40.94 | 37.59 |
| CDY47428 | Canola | nucleus | 28.78 | 37.54 |
| Os08t0118000-01 | Rice | nucleus | 34.49 | 37.37 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 24.07 | 37.02 |
| CDX84679 | Canola | nucleus | 24.07 | 37.02 |
| CDY41291 | Canola | nucleus | 27.54 | 36.39 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 33.99 | 35.86 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 29.03 | 35.56 |
| CDX98767 | Canola | nucleus | 28.78 | 35.26 |
| KXG24283 | Sorghum | plastid | 33.75 | 34.61 |
| CDX82971 | Canola | plastid | 18.36 | 34.42 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 33.25 | 34.36 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 33.0 | 34.02 |
| TraesCS7B01G215600.1 | Wheat | plastid | 33.0 | 33.76 |
| HORVU7Hr1G075040.1 | Barley | plastid | 32.51 | 33.33 |
| TraesCS7D01G312100.1 | Wheat | plastid | 32.51 | 33.0 |
| TraesCS7A01G315100.1 | Wheat | plastid | 32.26 | 32.66 |
| CDY01503 | Canola | cytosol | 20.1 | 31.27 |
| CDY41027 | Canola | cytosol | 19.35 | 29.32 |
| CDY25500 | Canola | nucleus | 26.55 | 28.92 |
| CDY26694 | Canola | cytosol, plastid | 18.61 | 28.63 |
| CDY41028 | Canola | nucleus, plastid | 17.37 | 28.23 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 25.31 | 28.18 |
| CDY26693 | Canola | plastid | 18.86 | 28.15 |
| CDY37704 | Canola | nucleus | 26.05 | 28.0 |
| CDY42495 | Canola | nucleus | 23.33 | 27.81 |
| CDY58791 | Canola | nucleus | 22.58 | 27.74 |
| CDY45364 | Canola | nucleus | 25.06 | 27.52 |
| CDY34355 | Canola | nucleus | 25.81 | 27.51 |
| CDX89109 | Canola | nucleus | 22.83 | 27.46 |
| CDY51561 | Canola | nucleus | 23.08 | 27.35 |
| CDX71746 | Canola | nucleus | 23.08 | 27.03 |
| CDY48928 | Canola | nucleus | 23.08 | 27.03 |
| CDY37070 | Canola | nucleus | 22.83 | 26.98 |
| CDY27354 | Canola | nucleus | 23.08 | 26.65 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 26.05 | 26.38 |
| CDY01506 | Canola | nucleus | 19.6 | 26.25 |
| CDY35172 | Canola | nucleus | 22.83 | 26.06 |
| CDX78814 | Canola | nucleus | 26.05 | 25.8 |
| CDY03203 | Canola | nucleus | 22.83 | 25.7 |
| CDY68252 | Canola | nucleus | 18.86 | 25.59 |
| CDY26692 | Canola | nucleus | 19.11 | 25.41 |
| CDY44500 | Canola | nucleus | 26.05 | 25.0 |
| CDY39751 | Canola | nucleus | 23.57 | 24.87 |
| CDY26691 | Canola | cytosol, plastid | 19.11 | 24.76 |
| CDY08882 | Canola | nucleus | 26.3 | 24.37 |
| CDY46385 | Canola | nucleus | 23.08 | 24.35 |
| CDX76549 | Canola | nucleus | 26.55 | 24.32 |
| CDY52506 | Canola | nucleus | 20.1 | 23.21 |
| CDY52477 | Canola | nucleus | 21.09 | 23.1 |
| CDY05594 | Canola | nucleus | 20.35 | 23.03 |
| CDY65362 | Canola | nucleus | 21.09 | 22.85 |
| CDY30005 | Canola | nucleus | 21.34 | 22.57 |
| CDY21122 | Canola | nucleus | 21.59 | 22.54 |
| CDY13231 | Canola | nucleus | 21.09 | 20.73 |
Protein Annotations
| EnsemblPlants:CDY00271 | EnsemblPlantsGene:GSBRNA2T00109837001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF18 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY00271 | ProteinID:CDY00271.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI000253F67C | MapMan:35.1 | : | : | : |
Description
BnaA06g21720D
Coordinates
chrLK031917:+:648062..650705
Molecular Weight (calculated)
42148.5 Da
IEP (calculated)
8.746
GRAVY (calculated)
-0.508
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDKSGISPS GVITVKGDEA LASRTEFQQS PSFLQFVSPT TVVTPPPPPP PAPTPASTTV NPGSAAAPPP PPISSAGLDL TKKKRGRPRK YAPDGSLNPR
101: ASRPTLSPTP ISSSIPFSGD YNHHSHWKRG KAQQQHVDII KKSHNFEYGS SPAPPPPPPG LSCYVGANFT THQFTVNAGE DVTMKVMPYS QGSRAICILS
201: ATGCISNVTL RQATTSGGTL TYEGRFEILS LSGSFMPTDN GGTKGRSGGM SISLAGPNGK IIGGGLAGML IAAGPVQVVM GSFIVMHQAE QTQKKKPRII
301: EASPPPLQRP PPGFTITTVN STSPLVATVE EPKQQTYGGG GGIMRPISQM PSSFNNDNSG MNNFTTTFQG YGNMNTGTNK DEDDYDDGGD DDSGDTRSLS
401: TSG
101: ASRPTLSPTP ISSSIPFSGD YNHHSHWKRG KAQQQHVDII KKSHNFEYGS SPAPPPPPPG LSCYVGANFT THQFTVNAGE DVTMKVMPYS QGSRAICILS
201: ATGCISNVTL RQATTSGGTL TYEGRFEILS LSGSFMPTDN GGTKGRSGGM SISLAGPNGK IIGGGLAGML IAAGPVQVVM GSFIVMHQAE QTQKKKPRII
301: EASPPPLQRP PPGFTITTVN STSPLVATVE EPKQQTYGGG GGIMRPISQM PSSFNNDNSG MNNFTTTFQG YGNMNTGTNK DEDDYDDGGD DDSGDTRSLS
401: TSG
001: MEEKGEISPS GVVTVKGDEA LVPRTEFQQN PSFLQFVSPT TVVTPLPPPP APSSAPVPTT VTPGSATAST GSDPTKKKRG RPRKYAPDGS LNPRFLRPTL
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
Arabidopsis Description
AHL6AT-hook motif nuclear-localized protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.