Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003446.1-P | Field mustard | nucleus | 95.12 | 92.04 |
| CDY51561 | Canola | nucleus | 90.85 | 87.65 |
| CDY42495 | Canola | nucleus | 76.83 | 74.56 |
| CDX89109 | Canola | nucleus | 75.91 | 74.33 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 79.27 | 73.45 |
| CDY48928 | Canola | nucleus | 76.83 | 73.26 |
| CDX71746 | Canola | nucleus | 76.22 | 72.67 |
| CDY27354 | Canola | nucleus | 66.16 | 62.18 |
| CDY37070 | Canola | nucleus | 64.33 | 61.88 |
| VIT_15s0046g02930.t01 | Wine grape | nucleus, plastid | 53.05 | 50.43 |
| KRH65066 | Soybean | nucleus | 51.83 | 50.0 |
| KRH48165 | Soybean | nucleus | 51.52 | 49.71 |
| KRH40471 | Soybean | nucleus | 50.61 | 48.68 |
| KRH00715 | Soybean | nucleus | 50.0 | 47.95 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 46.95 | 46.25 |
| Solyc01g094460.2.1 | Tomato | nucleus | 45.73 | 44.25 |
| PGSC0003DMT400000467 | Potato | nucleus | 45.43 | 43.95 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 44.82 | 42.49 |
| GSMUA_Achr11P... | Banana | nucleus | 46.04 | 40.27 |
| GSMUA_Achr11P... | Banana | nucleus | 45.43 | 40.16 |
| CDY25500 | Canola | nucleus | 41.46 | 36.76 |
| CDY45364 | Canola | nucleus | 40.85 | 36.51 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 39.94 | 36.19 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 35.67 | 35.89 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 33.23 | 35.5 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 21.04 | 35.2 |
| CDY34355 | Canola | nucleus | 40.55 | 35.19 |
| CDX84679 | Canola | nucleus | 28.05 | 35.11 |
| HORVU2Hr1G123730.3 | Barley | plastid | 22.26 | 34.76 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 27.74 | 34.73 |
| Zm00001d018515_P002 | Maize | nucleus | 40.24 | 34.02 |
| OQU85994 | Sorghum | nucleus | 41.16 | 33.67 |
| Os02t0824300-01 | Rice | nucleus | 39.94 | 33.25 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 39.63 | 32.5 |
| CDY39751 | Canola | nucleus | 37.2 | 31.94 |
| CDY41028 | Canola | nucleus, plastid | 24.09 | 31.85 |
| CDY46385 | Canola | nucleus | 36.59 | 31.41 |
| CDX82971 | Canola | plastid | 20.43 | 31.16 |
| CDY01503 | Canola | cytosol | 23.78 | 30.12 |
| CDY04392 | Canola | nucleus | 24.09 | 29.48 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 29.27 | 29.18 |
| CDX98767 | Canola | nucleus | 29.27 | 29.18 |
| CDY47428 | Canola | nucleus | 27.44 | 29.13 |
| CDY26692 | Canola | nucleus | 26.52 | 28.71 |
| CDY07239 | Canola | plasma membrane | 20.12 | 28.57 |
| CDY41291 | Canola | nucleus | 26.52 | 28.52 |
| CDY07238 | Canola | nucleus | 27.44 | 28.48 |
| Zm00001d026652_P001 | Maize | plastid | 34.15 | 28.21 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 34.15 | 27.72 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 33.84 | 27.54 |
| CDY26693 | Canola | plastid | 22.56 | 27.41 |
| CDY26694 | Canola | cytosol, plastid | 21.65 | 27.1 |
| KXG27470 | Sorghum | nucleus | 34.45 | 27.03 |
| CDY68252 | Canola | nucleus | 24.39 | 26.94 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 33.23 | 26.91 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 38.41 | 26.75 |
| Os04t0683900-01 | Rice | nucleus | 34.15 | 26.73 |
| CDY41027 | Canola | cytosol | 21.65 | 26.69 |
| CDY03203 | Canola | nucleus | 28.35 | 25.98 |
| CDX78814 | Canola | nucleus | 32.01 | 25.8 |
| CDY35172 | Canola | nucleus | 27.74 | 25.78 |
| CDY26691 | Canola | cytosol, plastid | 24.39 | 25.72 |
| CDY37704 | Canola | nucleus | 29.27 | 25.6 |
| HORVU7Hr1G122340.3 | Barley | nucleus | 27.13 | 25.5 |
| CDY08882 | Canola | nucleus | 33.54 | 25.29 |
| CDX94457 | Canola | nucleus | 28.96 | 25.13 |
| Zm00001d001784_P002 | Maize | nucleus | 33.23 | 25.06 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 40.55 | 25.05 |
| CDX92693 | Canola | nucleus | 30.18 | 25.0 |
| CDX89422 | Canola | nucleus | 29.27 | 25.0 |
| CDX76549 | Canola | nucleus | 33.54 | 25.0 |
| CDY49703 | Canola | nucleus | 30.18 | 24.81 |
| CDY44500 | Canola | nucleus | 31.71 | 24.76 |
| CDY38874 | Canola | nucleus | 31.71 | 24.59 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 29.57 | 24.37 |
| CDY01506 | Canola | nucleus | 22.26 | 24.25 |
| CDY00488 | Canola | nucleus | 31.71 | 24.24 |
| CDY21122 | Canola | nucleus | 28.35 | 24.09 |
| CDY52506 | Canola | nucleus | 25.61 | 24.07 |
| CDY32624 | Canola | nucleus | 31.1 | 24.06 |
| CDY16785 | Canola | nucleus | 28.66 | 23.98 |
| CDY30005 | Canola | nucleus | 27.74 | 23.88 |
| CDY05594 | Canola | nucleus | 25.61 | 23.6 |
| CDX87241 | Canola | nucleus | 28.05 | 23.53 |
| CDX99902 | Canola | nucleus | 31.4 | 23.46 |
| CDY65097 | Canola | nucleus | 29.57 | 23.15 |
| CDY00271 | Canola | nucleus | 27.74 | 22.58 |
| CDX86910 | Canola | nucleus | 27.44 | 22.56 |
| CDY52477 | Canola | nucleus | 25.3 | 22.55 |
| CDX91598 | Canola | nucleus | 28.66 | 22.43 |
| CDY65362 | Canola | nucleus | 25.3 | 22.31 |
| CDY30710 | Canola | nucleus | 26.83 | 21.95 |
| CDY13231 | Canola | nucleus | 23.48 | 18.78 |
Protein Annotations
| EnsemblPlants:CDY58791 | EnsemblPlantsGene:GSBRNA2T00025145001 | Gene3D:3.30.1330.80 | GO:A0A078J4F8 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:AT_hook_DNA-bd_motif | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF44 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY58791 | ProteinID:CDY58791.1 | SEG:seg |
| SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI0004EDC35A | UniProt:A0A078J4F8 | MapMan:35.1 | : |
Description
BnaA07g38060DBnaA07g38060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4F8]
Coordinates
chrLK033699:-:28793..30284
Molecular Weight (calculated)
34918.2 Da
IEP (calculated)
9.412
GRAVY (calculated)
-0.370
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQREAMALS GSGYYYIQRG MPGSAPPQTQ PSFYGSQGFQ QFSNPSSPFG STGFVYPPLP VETSQVDSPT PVALPPSGET FVKRKRGRPR KYGQDGSVSL
101: ALSPSLSSSM SPNSNKRGRG RPPGSGKKQR LSSTGGVMPW GTSFTPHVIV VSVGEDIASK VMSFSQQSPR AICVLSVTGA VSTATILQRS LSHGAIKYEG
201: RFELLSLSTS YPNATDNDYP NSTVNLAVSL ACPDYRVIGG GVGGPLIAAS SVQVIIGSYI WAIPKGKIKK RDEDVQETDA LDDNTAATSP DVPQQSHNLV
301: QTPVGMWSTG SRSMDMHHAH MDIDLMRG
101: ALSPSLSSSM SPNSNKRGRG RPPGSGKKQR LSSTGGVMPW GTSFTPHVIV VSVGEDIASK VMSFSQQSPR AICVLSVTGA VSTATILQRS LSHGAIKYEG
201: RFELLSLSTS YPNATDNDYP NSTVNLAVSL ACPDYRVIGG GVGGPLIAAS SVQVIIGSYI WAIPKGKIKK RDEDVQETDA LDDNTAATSP DVPQQSHNLV
301: QTPVGMWSTG SRSMDMHHAH MDIDLMRG
001: MDGREAMAFP GSHSQFYLQR GVFTNLTPSQ VASGLHAPPP PPGMRPMSNP NIHHPQASNP GPPFSMAEHR HSDFGHSIHM GMASPAAVQP TLQLPPPPSE
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
Arabidopsis Description
AHL5AT-hook motif nuclear-localized protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.