Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040133.1-P | Field mustard | nucleus | 95.28 | 94.78 |
| CDY21122 | Canola | nucleus | 95.54 | 94.3 |
| AT3G04590.2 | Thale cress | nucleus | 80.05 | 74.21 |
| CDY52506 | Canola | nucleus | 58.27 | 63.61 |
| CDY05594 | Canola | nucleus | 59.32 | 63.48 |
| CDY52477 | Canola | nucleus | 58.53 | 60.6 |
| CDY65362 | Canola | nucleus | 59.06 | 60.48 |
| KRH68809 | Soybean | nucleus | 46.72 | 51.45 |
| VIT_14s0081g00620.t01 | Wine grape | nucleus | 46.72 | 49.86 |
| KRG97062 | Soybean | nucleus | 46.19 | 48.75 |
| PGSC0003DMT400073848 | Potato | nucleus | 39.37 | 45.45 |
| CDY13231 | Canola | nucleus | 48.56 | 45.12 |
| Solyc11g006190.1.1 | Tomato | nucleus | 39.9 | 45.1 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 23.1 | 33.59 |
| CDX84679 | Canola | nucleus | 23.1 | 33.59 |
| CDY01503 | Canola | cytosol | 21.52 | 31.66 |
| CDY42495 | Canola | nucleus | 26.51 | 29.88 |
| CDY26693 | Canola | plastid | 21.0 | 29.63 |
| CDY37070 | Canola | nucleus | 26.25 | 29.33 |
| CDY41027 | Canola | cytosol | 20.47 | 29.32 |
| CDX89109 | Canola | nucleus | 25.72 | 29.25 |
| CDY27354 | Canola | nucleus | 26.51 | 28.94 |
| CDX71746 | Canola | nucleus | 25.98 | 28.78 |
| CDY48928 | Canola | nucleus | 25.98 | 28.78 |
| CDY26694 | Canola | cytosol, plastid | 19.16 | 27.86 |
| CDY58791 | Canola | nucleus | 23.88 | 27.74 |
| CDY07239 | Canola | plasma membrane | 16.8 | 27.71 |
| CDX98767 | Canola | nucleus | 23.88 | 27.66 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 23.62 | 27.36 |
| CDY51561 | Canola | nucleus | 24.41 | 27.35 |
| CDY68252 | Canola | nucleus | 21.26 | 27.27 |
| CDY04392 | Canola | nucleus | 19.16 | 27.24 |
| CDY47428 | Canola | nucleus | 22.05 | 27.18 |
| CDY41028 | Canola | nucleus, plastid | 17.59 | 27.02 |
| CDY01506 | Canola | nucleus | 21.26 | 26.91 |
| CDY26692 | Canola | nucleus | 21.26 | 26.73 |
| CDY07238 | Canola | nucleus | 22.05 | 26.58 |
| CDY25500 | Canola | nucleus | 25.72 | 26.49 |
| CDY45364 | Canola | nucleus | 25.2 | 26.16 |
| CDX82971 | Canola | plastid | 14.7 | 26.05 |
| CDY26691 | Canola | cytosol, plastid | 21.26 | 26.05 |
| CDY41291 | Canola | nucleus | 20.73 | 25.9 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 24.41 | 25.69 |
| CDY34355 | Canola | nucleus | 24.67 | 24.87 |
| CDX94457 | Canola | nucleus | 24.67 | 24.87 |
| CDY39751 | Canola | nucleus | 24.67 | 24.61 |
| CDX78814 | Canola | nucleus | 25.98 | 24.32 |
| CDX92693 | Canola | nucleus | 25.2 | 24.24 |
| CDY38874 | Canola | nucleus | 26.77 | 24.11 |
| CDY49703 | Canola | nucleus | 25.2 | 24.06 |
| CDY46385 | Canola | nucleus | 23.88 | 23.82 |
| CDX89422 | Canola | nucleus | 23.88 | 23.7 |
| CDY37704 | Canola | nucleus | 23.1 | 23.47 |
| CDY03203 | Canola | nucleus | 22.05 | 23.46 |
| CDY32624 | Canola | nucleus | 25.98 | 23.35 |
| CDY44500 | Canola | nucleus | 25.72 | 23.33 |
| CDY00488 | Canola | nucleus | 25.98 | 23.08 |
| CDX76549 | Canola | nucleus | 26.51 | 22.95 |
| CDY35172 | Canola | nucleus | 21.26 | 22.95 |
| CDY08882 | Canola | nucleus | 25.98 | 22.76 |
| CDY16785 | Canola | nucleus | 23.36 | 22.7 |
| CDX91598 | Canola | nucleus | 24.93 | 22.67 |
| CDY65097 | Canola | nucleus | 24.93 | 22.67 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 23.62 | 22.61 |
| CDX99902 | Canola | nucleus | 25.72 | 22.32 |
| CDX87241 | Canola | nucleus | 22.83 | 22.25 |
| CDX86910 | Canola | nucleus | 22.57 | 21.55 |
| CDY00271 | Canola | nucleus | 22.57 | 21.34 |
| CDY30710 | Canola | nucleus | 22.05 | 20.95 |
Protein Annotations
| EnsemblPlants:CDY30005 | EnsemblPlantsGene:GSBRNA2T00044534001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF22 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY30005 | ProteinID:CDY30005.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EC6DDD | UniProt:A0A078GU33 | MapMan:35.1 | : | : |
Description
BnaC01g40030DBnaC01g40030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GU33]
Coordinates
chrLK032247:-:416263..418539
Molecular Weight (calculated)
39917.4 Da
IEP (calculated)
9.085
GRAVY (calculated)
-0.769
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPHESHQQQ RLSSPYFHHH LQHHHHPSTV SSGNAVPPPN NGLFPPPPQA NDGSSSHAVH PHSSAVTAPS EPLKRKRGRP RKYVTPEQAL EAKKMASAAS
101: SSSAKERREQ AAASSSAGPS KKSHLGSVGK TGQSFTPHIV NIAPGEDVAQ KIVMFAQQSK HELCVLSASG TISTASLRQP GGNISYEGHY EIISLSGSFI
201: RSEQGGKTGG LCVSLSRSDG QIIGGAVGTH LTASGPVQVI LGTFQLDRKK DAAGSGVKGE ASNSGSRLTS PSSTGPGPGP GPLLGMGFRS VMESPGRNPM
301: RGTDEQHHHH HQHQQTGMGG SHHFMMQAPQ GMQMTHPRPS EWGGGGSSGH DGRGGGGGYD LSGRLGHESF ENGDDEQQMP D
101: SSSAKERREQ AAASSSAGPS KKSHLGSVGK TGQSFTPHIV NIAPGEDVAQ KIVMFAQQSK HELCVLSASG TISTASLRQP GGNISYEGHY EIISLSGSFI
201: RSEQGGKTGG LCVSLSRSDG QIIGGAVGTH LTASGPVQVI LGTFQLDRKK DAAGSGVKGE ASNSGSRLTS PSSTGPGPGP GPLLGMGFRS VMESPGRNPM
301: RGTDEQHHHH HQHQQTGMGG SHHFMMQAPQ GMQMTHPRPS EWGGGGSSGH DGRGGGGGYD LSGRLGHESF ENGDDEQQMP D
001: MDPNESHHHH QQQQLHHLHQ QQQQQQQQQR LTSPYFHHQL QHHHHLPTTV ATTASTGNAV PSSNNGLFPP QPQPQHQPND GSSSLAVYPH SVPSSAVTAP
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGSRLTSP VSSGQLLGMG FPPGMESTGR NPMRGNDEQH DHHHHQAGLG GPHHFMMQAP QGIHMTHSRP SEWRGGGNSG HDGRGGGGYD LSGRIGHESS
401: ENGDYEQQIP D
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGSRLTSP VSSGQLLGMG FPPGMESTGR NPMRGNDEQH DHHHHQAGLG GPHHFMMQAP QGIHMTHSRP SEWRGGGNSG HDGRGGGGYD LSGRIGHESS
401: ENGDYEQQIP D
Arabidopsis Description
AHL14AT-hook motif nuclear-localized protein 14 [Source:UniProtKB/Swiss-Prot;Acc:A1L4X7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.