Factsheet for VIT_14s0081g00620.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68809	Soybean	nucleus	63.87	65.9
KRG97062	Soybean	nucleus	63.31	62.6
PGSC0003DMT400073848	Potato	nucleus	54.9	59.39
Solyc11g006190.1.1	Tomato	nucleus	54.9	58.16
AT5G28590.1	Thale cress	mitochondrion	29.69	49.07
CDY52506	Canola	nucleus	46.22	47.28
Bra040133.1-P	Field mustard	nucleus	50.42	47.0
CDY21122	Canola	nucleus	50.7	46.89
CDY30005	Canola	nucleus	49.86	46.72
CDY05594	Canola	nucleus	46.5	46.63
Bra020612.1-P	Field mustard	nucleus	45.94	46.59
AT3G04590.2	Thale cress	nucleus	53.5	46.47
CDY65362	Canola	nucleus	46.22	44.35
CDY52477	Canola	nucleus	45.66	44.29
Bra009999.1-P	Field mustard	nucleus	45.94	44.09
VIT_15s0046g02930.t01	Wine grape	nucleus, plastid	35.01	36.23
VIT_18s0122g00700.t01	Wine grape	nucleus	33.89	34.28
CDY13231	Canola	nucleus	39.22	34.15
VIT_02s0025g05130.t01	Wine grape	cytosol, nucleus, peroxisome	30.25	32.73
VIT_02s0025g03580.t01	Wine grape	nucleus	31.37	32.37
VIT_15s0048g00870.t01	Wine grape	nucleus	29.41	31.44
VIT_02s0012g00900.t01	Wine grape	nucleus	30.25	30.59
VIT_16s0022g01810.t01	Wine grape	cytosol, nucleus, peroxisome	29.97	30.48
VIT_08s0007g04020.t01	Wine grape	nucleus	28.57	28.25

Protein Annotations

EntrezGene:100261576	wikigene:100261576	Gene3D:3.30.1330.80	MapMan:35.1	ProteinID:CBI35169	ProteinID:CBI35169.3
UniProt:D7TXH6	EMBL:FN596256	InterPro:IPR005175	EntrezGene:LOC100261576	wikigene:LOC100261576	PFAM:PF03479
InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31500	PANTHER:PTHR31500:SF22	SUPFAM:SSF117856	TIGR:TC60641
UniParc:UPI00019859FD	ArrayExpress:VIT_14s0081g00620	EnsemblPlantsGene:VIT_14s0081g00620	EnsemblPlants:VIT_14s0081g00620.t01	unigene:Vvi.210	RefSeq:XP_002270792
RefSeq:XP_002270792.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:+:8848651..8872267

Molecular Weight (calculated)

37421.0 Da

IEP (calculated)

9.975

GRAVY (calculated)

-0.578

Length

357 amino acids

Sequence
(BLAST)

001: MEPNDTRLTS YFHHHQQQPQ PPPPPPPQPQ PHHQTQNPVA ATAASPSNGL LPPSERPPLG YHHSVPSAVT SPPETVRRKR GRPRKYGTSE QGLSAKKSPS
101: SSVPVPKKKE QGLGGSSKKS QLVSLGNAGQ SFTPHVITVA SGEDVAQKIM FFMQQSKREI CIMSASGSIS NASLRQPATS GGNVAYEGRF EILSLTGSYV
201: RTEIGGRTGG LSVCLSNTDG EIIGGGVGGP LKAAGPVQVI VGTFLVDSKK DTSTGLKADA SPKFTSPVGG ASVSNVGFRS AVESSGRIPV MGNDDHQGIG
301: GSHFMIQSRG MQMAPTRPTD WRSGPDARIN VGYDLAGRGG RGACQSPENG DYEQIPD

Best Arabidopsis Sequence Match ( AT3G04590.2 )
(BLAST)

001: MDPNESHHHH QQQQLHHLHQ QQQQQQQQQR LTSPYFHHQL QHHHHLPTTV ATTASTGNAV PSSNNGLFPP QPQPQHQPND GSSSLAVYPH SVPSSAVTAP
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGSRLTSP VSSGQLLGMG FPPGMESTGR NPMRGNDEQH DHHHHQAGLG GPHHFMMQAP QGIHMTHSRP SEWRGGGNSG HDGRGGGGYD LSGRIGHESS
401: ENGDYEQQIP D

Arabidopsis Description

AHL14AT-hook motif nuclear-localized protein 14 [Source:UniProtKB/Swiss-Prot;Acc:A1L4X7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.