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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
  • peroxisome 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH34345 Soybean nucleus 61.25 65.15
KRG92455 Soybean nucleus 60.68 64.55
Solyc03g007150.2.1 Tomato nucleus 59.54 64.31
VIT_02s0025g05130.t01 Wine grape cytosol, nucleus, peroxisome 59.54 63.33
PGSC0003DMT400071865 Potato plastid 54.42 62.01
KRH09229 Soybean nucleus 59.26 60.47
PGSC0003DMT400079651 Potato nucleus 59.26 60.12
KRH38723 Soybean nucleus 57.55 58.72
Solyc06g035430.2.1 Tomato nucleus 56.41 57.23
VIT_15s0048g00870.t01 Wine grape nucleus 53.56 56.29
GSMUA_Achr1P19840_001 Banana nucleus 55.56 51.18
GSMUA_Achr7P06500_001 Banana cytosol, plasma membrane, plastid 48.43 50.6
GSMUA_AchrUn_... Banana cytosol, nucleus, plastid 49.57 45.55
Os08t0118000-01 Rice nucleus 47.58 44.89
GSMUA_Achr2P03170_001 Banana cytosol, peroxisome, plasma membrane 49.0 44.1
VIT_18s0122g00700.t01 Wine grape nucleus 42.45 42.21
KXG24283 Sorghum plastid 46.44 41.48
CDX94457 Canola nucleus 44.16 41.01
TraesCS7B01G215600.1 Wheat plastid 45.58 40.61
HORVU7Hr1G075040.1 Barley plastid 45.3 40.46
Bra019174.1-P Field mustard nucleus 45.58 40.4
CDX92693 Canola nucleus 45.3 40.15
CDY49703 Canola nucleus 45.58 40.1
AT4G25320.1 Thale cress nucleus 46.15 40.1
TraesCS7D01G312100.1 Wheat plastid 45.3 40.05
VIT_15s0046g02930.t01 Wine grape nucleus, plastid 39.32 40.0
TraesCS7A01G315100.1 Wheat plastid 45.3 39.95
AT5G51590.1 Thale cress nucleus 47.58 39.86
CDX89422 Canola nucleus 43.59 39.84
Bra013886.1-P Field mustard nucleus 43.02 39.63
CDY38874 Canola nucleus 47.01 39.01
Bra029164.1-P Field mustard nucleus 47.01 38.92
Zm00001d049661_P001 Maize cytosol, peroxisome, plasma membrane 43.3 38.87
CDY32624 Canola nucleus 46.44 38.44
CDY00488 Canola nucleus 46.44 38.0
VIT_08s0007g04020.t01 Wine grape nucleus 39.03 37.95
Bra028265.1-P Field mustard nucleus 46.15 37.76
CDY16785 Canola nucleus 42.17 37.76
Bra035899.1-P Field mustard nucleus 42.17 37.76
CDX87241 Canola nucleus 41.88 37.6
CDX91598 Canola nucleus 44.16 36.99
CDX86910 Canola nucleus 41.88 36.84
VIT_02s0012g00900.t01 Wine grape nucleus 37.04 36.83
CDY00271 Canola nucleus 42.17 36.72
Bra010070.1-P Field mustard nucleus 42.17 36.72
Bra022555.1-P Field mustard nucleus 43.59 36.52
CDY65097 Canola nucleus 43.59 36.52
CDX99902 Canola nucleus 45.58 36.45
AT5G62260.3 Thale cress nucleus 41.6 36.14
VIT_02s0025g03580.t01 Wine grape nucleus 34.76 35.26
CDY30710 Canola nucleus 39.89 34.91
Bra029271.1-P Field mustard cytosol, nucleus, peroxisome 39.32 34.41
VIT_14s0081g00620.t01 Wine grape nucleus 30.48 29.97
Protein Annotations
EntrezGene:100254941wikigene:100254941Gene3D:3.30.1330.80MapMan:35.1ProteinID:CCB49263ProteinID:CCB49263.1
UniProt:F6HAK6EMBL:FN595506GO:GO:0000226GO:GO:0000910GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0007049GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043
InterPro:IPR005175EntrezGene:LOC100254941wikigene:LOC100254941PFAM:PF03479InterPro:PPC_domPFscan:PS51742
PANTHER:PTHR31500PANTHER:PTHR31500:SF18SUPFAM:SSF117856UniParc:UPI00015CBAF8ArrayExpress:VIT_16s0022g01810EnsemblPlantsGene:VIT_16s0022g01810
EnsemblPlants:VIT_16s0022g01810.t01RefSeq:XP_002268693RefSeq:XP_002268693.2RefSeq:XP_010662378.1SEG:seg:
Description
No Description!
Coordinates
chr16:-:14008044..14016080
Molecular Weight (calculated)
36126.7 Da
IEP (calculated)
9.851
GRAVY (calculated)
-0.367
Length
351 amino acids
Sequence
(BLAST)
001: MEGTEGINSG VTVKGEEAPD TYRVAARSEN PSEFGGSTMT AVSPVAAPAP TPATAPAPAP GSAPTPAPVS VAMPSSEMKK KRGRPRKYGP GGSLTMALSP
101: MPISSSIPLT GEFSAWKRGR GRPVDSFKKQ HKSESESAGE RVAYSVGANF TPHVITVNAG EDVTMKIISF SQQGSRAICI LSANGAISNV TLRQPNSSGG
201: TLTYEGRFEI LSLSGSFMPS ESGGTKSRSG GMSVSLAGPD GRVLGGGLAG LLVAAGPVQV LVGSFLPGHQ QEQKPKKQRI EPVQAAIPAT VNSMPREETL
301: GANGGPNLNL TSPSSFHGDT WASLNSMQGS RNLDIENKLP VSEGETKGPS Q
Best Arabidopsis Sequence Match ( AT4G12080.1 )
(BLAST)
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Arabidopsis Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.