Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09229 | Soybean | nucleus | 92.44 | 92.44 |
| KRH34345 | Soybean | nucleus | 67.73 | 70.61 |
| KRG92455 | Soybean | nucleus | 67.15 | 70.0 |
| Solyc03g007150.2.1 | Tomato | nucleus | 55.23 | 58.46 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 58.72 | 57.55 |
| PGSC0003DMT400079651 | Potato | nucleus | 54.36 | 54.05 |
| PGSC0003DMT400071865 | Potato | plastid | 48.26 | 53.9 |
| KRH57315 | Soybean | nucleus | 49.13 | 51.68 |
| KRH04046 | Soybean | nucleus | 48.84 | 50.76 |
| Solyc06g035430.2.1 | Tomato | nucleus | 50.29 | 50.0 |
| KRH65263 | Soybean | cytosol, nucleus, plastid | 49.13 | 48.84 |
| KRH00569 | Soybean | cytosol, peroxisome, plastid | 47.97 | 48.82 |
| KRH76268 | Soybean | cytosol, nucleus, plastid | 48.84 | 48.55 |
| KRH40594 | Soybean | nucleus | 46.22 | 47.18 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 45.06 | 46.13 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 48.84 | 44.09 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 47.97 | 43.19 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 47.09 | 41.54 |
| KRH05193 | Soybean | plastid | 17.44 | 40.82 |
| Os08t0118000-01 | Rice | nucleus | 43.9 | 40.59 |
| CDX94457 | Canola | nucleus | 42.73 | 38.89 |
| KXG24283 | Sorghum | plastid | 44.19 | 38.68 |
| CDX89422 | Canola | nucleus | 42.15 | 37.76 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 42.44 | 37.34 |
| Bra013886.1-P | Field mustard | nucleus | 41.28 | 37.27 |
| TraesCS7B01G215600.1 | Wheat | plastid | 41.86 | 36.55 |
| HORVU7Hr1G075040.1 | Barley | plastid | 41.57 | 36.39 |
| Bra019174.1-P | Field mustard | nucleus | 41.86 | 36.36 |
| TraesCS7A01G315100.1 | Wheat | plastid | 41.86 | 36.18 |
| AT4G25320.1 | Thale cress | nucleus | 42.44 | 36.14 |
| CDX92693 | Canola | nucleus | 41.57 | 36.11 |
| CDY49703 | Canola | nucleus | 41.86 | 36.09 |
| TraesCS7D01G312100.1 | Wheat | plastid | 41.57 | 36.02 |
| Bra035899.1-P | Field mustard | nucleus | 40.99 | 35.97 |
| CDY16785 | Canola | nucleus | 40.99 | 35.97 |
| CDX87241 | Canola | nucleus | 40.7 | 35.81 |
| CDX86910 | Canola | nucleus | 40.99 | 35.34 |
| AT5G51590.1 | Thale cress | nucleus | 43.02 | 35.32 |
| KRH51558 | Soybean | nucleus | 36.34 | 35.21 |
| AT5G62260.3 | Thale cress | nucleus | 41.28 | 35.15 |
| KRH65066 | Soybean | nucleus | 34.59 | 35.0 |
| KRH48165 | Soybean | nucleus | 34.59 | 35.0 |
| CDY38874 | Canola | nucleus | 42.73 | 34.75 |
| CDY00271 | Canola | nucleus | 40.7 | 34.74 |
| Bra010070.1-P | Field mustard | nucleus | 40.7 | 34.74 |
| CDY00488 | Canola | nucleus | 43.31 | 34.73 |
| Bra029164.1-P | Field mustard | nucleus | 42.73 | 34.67 |
| KRH20019 | Soybean | nucleus | 38.08 | 34.56 |
| Bra028265.1-P | Field mustard | nucleus | 43.02 | 34.5 |
| KRH60876 | Soybean | nucleus | 35.76 | 34.45 |
| KRH00715 | Soybean | nucleus | 34.01 | 34.21 |
| KRH40471 | Soybean | nucleus | 33.72 | 34.02 |
| CDY32624 | Canola | nucleus | 41.86 | 33.96 |
| CDY30710 | Canola | nucleus | 38.66 | 33.17 |
| CDX99902 | Canola | nucleus | 42.15 | 33.03 |
| CDX91598 | Canola | nucleus | 39.83 | 32.7 |
| Bra022555.1-P | Field mustard | nucleus | 39.24 | 32.22 |
| CDY65097 | Canola | nucleus | 39.24 | 32.22 |
| Bra029271.1-P | Field mustard | cytosol, nucleus, peroxisome | 37.5 | 32.17 |
| KRH32644 | Soybean | plastid | 36.63 | 31.82 |
| KRH27929 | Soybean | nucleus | 32.56 | 31.82 |
| KRH77536 | Soybean | nucleus | 32.27 | 31.09 |
| KRH58200 | Soybean | nucleus | 31.69 | 30.11 |
| KRH68809 | Soybean | nucleus | 29.36 | 29.19 |
| KRH59866 | Soybean | nucleus | 29.65 | 28.98 |
| KRH41165 | Soybean | nucleus | 29.65 | 28.98 |
| KRH04337 | Soybean | nucleus | 29.94 | 28.93 |
| KRH28286 | Soybean | plastid | 28.2 | 28.61 |
| KRG97062 | Soybean | nucleus | 29.65 | 28.25 |
| KRH77206 | Soybean | nucleus | 27.33 | 27.81 |
| KRH25156 | Soybean | cytosol | 20.64 | 27.31 |
| KRH30520 | Soybean | nucleus | 26.74 | 24.86 |
Protein Annotations
| EMBL:ACUP02005867 | EnsemblPlants:KRH38723 | EnsemblPlantsGene:GLYMA_09G153600 | EntrezGene:102667678 | Gene3D:3.30.1330.80 | InterPro:IPR005175 |
| InterPro:PPC_dom | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF18 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:KRH38723 |
| ProteinID:KRH38723.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI00023C981B | UniProt:I1L3K5 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr9:+:37641961..37647796
Molecular Weight (calculated)
35574.2 Da
IEP (calculated)
8.468
GRAVY (calculated)
-0.184
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEREIFSSG HAVKVVEAPQ SFHVALNSVQ FSGPTVESPV PSPVPASAPA PAPVSASVMN SGSTEGKKKR GRPRKYGPDG KVALSPMPIS ASIPLTGDFS
101: AWKRGRGKPL ESIKKSFKFY EAGGAGPGDG IAYSVGANFT PHILTVNEGE DVTMKIMSFS QQGCQAICIL SANGTISNVT LRQPTSSGGT LTYEGRFEIL
201: SLSGSYITTE NGLTKSRSGG MSISLAAPDG RVMGGGLAGL LVAAGPVQVV VASFVPGHQL EQQKPKKPRV EHISMAAPTY VNPTSAEEIR IGLGGVKPIM
301: TPAAFQVHHI FGNGQSSGNS ASDDSAPFPE NESNPSHADA GVAC
101: AWKRGRGKPL ESIKKSFKFY EAGGAGPGDG IAYSVGANFT PHILTVNEGE DVTMKIMSFS QQGCQAICIL SANGTISNVT LRQPTSSGGT LTYEGRFEIL
201: SLSGSYITTE NGLTKSRSGG MSISLAAPDG RVMGGGLAGL LVAAGPVQVV VASFVPGHQL EQQKPKKPRV EHISMAAPTY VNPTSAEEIR IGLGGVKPIM
301: TPAAFQVHHI FGNGQSSGNS ASDDSAPFPE NESNPSHADA GVAC
001: MEEKGEISPS GVVTVKGDEA LVPRTEFQQN PSFLQFVSPT TVVTPLPPPP APSSAPVPTT VTPGSATAST GSDPTKKKRG RPRKYAPDGS LNPRFLRPTL
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
Arabidopsis Description
AHL6AT-hook motif nuclear-localized protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.