Factsheet for Bra028265.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra022555.1-P
Bra028265.1-P
Bra029164.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51590.1	Bra022555.1-P	AT5G51590.1	23335615
AT5G51590.1	Bra028265.1-P	AT5G51590.1	23335615
AT5G51590.1	Bra029164.1-P	AT5G51590.1	23335615

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00488	Canola	nucleus	99.53	99.53
CDX99902	Canola	nucleus	93.01	90.89
Bra029164.1-P	Field mustard	nucleus	84.85	85.85
AT5G51590.1	Thale cress	nucleus	79.25	81.15
Bra022555.1-P	Field mustard	nucleus	76.22	78.04
Bra019174.1-P	Field mustard	nucleus	61.07	66.16
Bra013886.1-P	Field mustard	nucleus	56.18	63.25
KRG92455	Soybean	nucleus	35.9	46.67
KRH34345	Soybean	nucleus	35.9	46.67
VIT_16s0022g01810.t01	Wine grape	cytosol, nucleus, peroxisome	37.76	46.15
Solyc03g007150.2.1	Tomato	nucleus	33.57	44.31
PGSC0003DMT400071865	Potato	plastid	31.24	43.51
KRH09229	Soybean	nucleus	34.73	43.31
KRH38723	Soybean	nucleus	34.5	43.02
Bra010070.1-P	Field mustard	nucleus	40.09	42.68
Bra035899.1-P	Field mustard	nucleus	38.93	42.6
Bra022946.1-P	Field mustard	nucleus	25.87	42.37
Bra029271.1-P	Field mustard	cytosol, nucleus, peroxisome	38.93	41.65
PGSC0003DMT400079651	Potato	nucleus	33.1	41.04
Bra037321.1-P	Field mustard	nucleus	30.07	40.82
Solyc06g035430.2.1	Tomato	nucleus	32.63	40.46
GSMUA_Achr7P06500_001	Banana	cytosol, plasma membrane, plastid	31.24	39.88
Bra013646.1-P	Field mustard	nucleus	27.97	39.34
Bra019359.1-P	Field mustard	nucleus	29.84	38.91
GSMUA_Achr1P19840_001	Banana	nucleus	33.8	38.06
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	32.87	36.91
Bra033121.1-P	Field mustard	nucleus	26.34	36.45
Os08t0118000-01	Rice	nucleus	30.3	34.95
GSMUA_Achr2P03170_001	Banana	cytosol, peroxisome, plasma membrane	31.7	34.87
Bra021865.1-P	Field mustard	nucleus	27.04	33.14
TraesCS7B01G215600.1	Wheat	plastid	30.3	32.99
HORVU7Hr1G075040.1	Barley	plastid	30.07	32.82
TraesCS7D01G312100.1	Wheat	plastid	30.3	32.75
Zm00001d049661_P001	Maize	cytosol, peroxisome, plasma membrane	29.84	32.74
TraesCS7A01G315100.1	Wheat	plastid	30.3	32.66
KXG24283	Sorghum	plastid	29.84	32.57
Bra039309.1-P	Field mustard	nucleus	24.94	31.38
Bra025511.1-P	Field mustard	nucleus	20.05	31.05
Bra014444.1-P	Field mustard	nucleus	23.78	30.63
Bra007595.1-P	Field mustard	nucleus	24.24	30.5
Bra027642.1-P	Field mustard	nucleus	26.11	29.4
Bra027801.1-P	Field mustard	nucleus	25.17	28.8
Bra003446.1-P	Field mustard	nucleus	22.38	28.32
Bra025716.1-P	Field mustard	nucleus	16.78	26.77
Bra025717.1-P	Field mustard	nucleus	18.65	26.4
Bra021027.1-P	Field mustard	nucleus	24.24	25.37
Bra040133.1-P	Field mustard	nucleus	22.61	25.33
Bra009999.1-P	Field mustard	nucleus	21.91	25.27
Bra017536.1-P	Field mustard	nucleus	20.75	25.21
Bra020612.1-P	Field mustard	nucleus	20.51	25.0
Bra013270.1-P	Field mustard	nucleus	24.24	24.41
Bra025718.1-P	Field mustard	nucleus, plastid	17.25	24.34

Protein Annotations

EnsemblPlants:Bra028265.1	EnsemblPlants:Bra028265.1-P	EnsemblPlantsGene:Bra028265	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
ncoils:Coil	PANTHER:PTHR31500	PANTHER:PTHR31500:SF18	PFAM:PF03479	PFscan:PS51742	SEG:seg
SUPFAM:SSF117856	UniParc:UPI0002543BB8	UniProt:M4EHK0	MapMan:35.1	:	:

Description

AT5G51590 (E=1e-135) | DNA-binding protein-related

Coordinates

chrA01:+:19148654..19150878

Molecular Weight (calculated)

45474.8 Da

IEP (calculated)

5.153

GRAVY (calculated)

-0.592

Length

429 amino acids

Sequence
(BLAST)

001: MEEREGTSNN IISSFGLNQH VAPPPPTGGG GVYHMDPPRS ENPNPFPVGL PNTTAASASA SVAAAKASEN AAPPFSLTMP VENTSSELKK KRGRPRKYNP
101: DGSLAVTLSP MPISSSVPLT TEFSSRKRGR GRGRGRGRGR GRGLVEPPIN NNNWVKNPQM FEFDNSSPVV RTPEVVTSAS FTPHVLTVNA GEDVTMKIMT
201: FSQQSSRAIC ILSANGPVSN VTLRQSMTSG GTLTYEGHFE ILSLTGSFIP SESGGTRSRA GGMSVPLAGP DGRVFGGGLA GLFIAAGPVQ VVVGRFVAGQ
301: EESQQQQQQQ QMKTQRRERF GIPTSTQASN ISFGGGSAED PKARYGLNKP VVIQAPPMSA PPVPFSQHEP QPSTNAVQGY YTNNTAEQIR DLFSSLPGED
401: DDEDDDLEGE DGDDGEFGDH SESDTEVPS

Best Arabidopsis Sequence Match ( AT5G51590.1 )
(BLAST)

001: MEEREGTNIN NIPTSFGLKQ HETPLPPPGY PPRSENPNLF PVGQSSTSSA AAAVKPSENV APPFSLTMPV ENSSSELKKK RGRPRKYNPD GSLAVTLSPM
101: PISSSVPLTS EFGSRKRGRG RGRGRGRGRG RGQGQGSREP NNNNNDNNWL KNPQMFEFNN NTPTSGGGGP AEIVSPSFTP HVLTVNAGED VTMKIMTFSQ
201: QGSRAICILS ANGPISNVTL RQSMTSGGTL TYEGHFEILS LTGSFIPSES GGTRSRAGGM SVSLAGQDGR VFGGGLAGLF IAAGPVQVMV GSFIAGQEES
301: QQQQQQIKKQ RRERLGIPTT TQASNISFGG SAEDPKARYG LNKPVVIQPP PVSAPPVSFS HEPSTNTVHG YYANNTANHI KDLFSSLPGE DREEDEDDLE
401: GEDDEEFGGH SESDTEVPS

Arabidopsis Description

AHL4AT-hook motif nuclear-localized protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.