Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92455 | Soybean | nucleus | 96.67 | 96.67 |
| KRH38723 | Soybean | nucleus | 70.61 | 67.73 |
| KRH09229 | Soybean | nucleus | 70.3 | 67.44 |
| Solyc03g007150.2.1 | Tomato | nucleus | 61.52 | 62.46 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 65.15 | 61.25 |
| PGSC0003DMT400079651 | Potato | nucleus | 60.0 | 57.23 |
| PGSC0003DMT400071865 | Potato | plastid | 52.12 | 55.84 |
| KRH57315 | Soybean | nucleus | 52.12 | 52.6 |
| KRH04046 | Soybean | nucleus | 52.42 | 52.27 |
| Solyc06g035430.2.1 | Tomato | nucleus | 54.55 | 52.02 |
| KRH00569 | Soybean | cytosol, peroxisome, plastid | 52.42 | 51.18 |
| KRH40594 | Soybean | nucleus | 51.52 | 50.45 |
| KRH76268 | Soybean | cytosol, nucleus, plastid | 52.12 | 49.71 |
| KRH65263 | Soybean | cytosol, nucleus, plastid | 51.82 | 49.42 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 50.3 | 49.4 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 53.64 | 46.46 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 50.91 | 43.98 |
| KRH05193 | Soybean | plastid | 19.39 | 43.54 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 50.0 | 42.31 |
| Os08t0118000-01 | Rice | nucleus | 46.67 | 41.4 |
| KXG24283 | Sorghum | plastid | 47.58 | 39.95 |
| CDX94457 | Canola | nucleus | 45.76 | 39.95 |
| CDX89422 | Canola | nucleus | 45.76 | 39.32 |
| Bra013886.1-P | Field mustard | nucleus | 44.85 | 38.85 |
| CDX92693 | Canola | nucleus | 45.76 | 38.13 |
| Bra019174.1-P | Field mustard | nucleus | 45.76 | 38.13 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 45.15 | 38.11 |
| CDY49703 | Canola | nucleus | 45.76 | 37.84 |
| AT4G25320.1 | Thale cress | nucleus | 46.06 | 37.62 |
| TraesCS7B01G215600.1 | Wheat | plastid | 44.85 | 37.56 |
| HORVU7Hr1G075040.1 | Barley | plastid | 44.55 | 37.4 |
| AT5G51590.1 | Thale cress | nucleus | 47.27 | 37.23 |
| TraesCS7A01G315100.1 | Wheat | plastid | 44.85 | 37.19 |
| KRH65066 | Soybean | nucleus | 38.18 | 37.06 |
| TraesCS7D01G312100.1 | Wheat | plastid | 44.55 | 37.03 |
| Bra035899.1-P | Field mustard | nucleus | 43.94 | 36.99 |
| CDY16785 | Canola | nucleus | 43.94 | 36.99 |
| KRH48165 | Soybean | nucleus | 37.88 | 36.76 |
| CDX87241 | Canola | nucleus | 43.33 | 36.57 |
| KRH00715 | Soybean | nucleus | 37.88 | 36.55 |
| CDY38874 | Canola | nucleus | 46.36 | 36.17 |
| CDY00488 | Canola | nucleus | 46.97 | 36.13 |
| CDX86910 | Canola | nucleus | 43.64 | 36.09 |
| Bra029164.1-P | Field mustard | nucleus | 46.36 | 36.08 |
| KRH40471 | Soybean | nucleus | 37.27 | 36.07 |
| Bra028265.1-P | Field mustard | nucleus | 46.67 | 35.9 |
| KRH51558 | Soybean | nucleus | 38.48 | 35.77 |
| AT5G62260.3 | Thale cress | nucleus | 43.64 | 35.64 |
| CDY00271 | Canola | nucleus | 43.33 | 35.48 |
| Bra010070.1-P | Field mustard | nucleus | 43.33 | 35.48 |
| CDY32624 | Canola | nucleus | 45.45 | 35.38 |
| KRH20019 | Soybean | nucleus | 40.61 | 35.36 |
| KRH60876 | Soybean | nucleus | 37.88 | 35.01 |
| CDX99902 | Canola | nucleus | 46.06 | 34.62 |
| CDX91598 | Canola | nucleus | 42.73 | 33.65 |
| CDY30710 | Canola | nucleus | 40.61 | 33.42 |
| Bra022555.1-P | Field mustard | nucleus | 42.12 | 33.17 |
| Bra029271.1-P | Field mustard | cytosol, nucleus, peroxisome | 40.3 | 33.17 |
| KRH32644 | Soybean | plastid | 39.7 | 33.08 |
| CDY65097 | Canola | nucleus | 41.82 | 32.94 |
| KRH27929 | Soybean | nucleus | 33.94 | 31.82 |
| KRH58200 | Soybean | nucleus | 34.85 | 31.77 |
| KRH77536 | Soybean | nucleus | 34.24 | 31.65 |
| KRH59866 | Soybean | nucleus | 32.42 | 30.4 |
| KRH41165 | Soybean | nucleus | 32.12 | 30.11 |
| KRH04337 | Soybean | nucleus | 32.12 | 29.78 |
| KRH28286 | Soybean | plastid | 30.0 | 29.2 |
| KRH68809 | Soybean | nucleus | 30.3 | 28.9 |
| KRH77206 | Soybean | nucleus | 29.39 | 28.7 |
| KRG97062 | Soybean | nucleus | 30.61 | 27.98 |
| KRH25156 | Soybean | cytosol | 21.82 | 27.69 |
| KRH30520 | Soybean | nucleus | 26.97 | 24.05 |
Protein Annotations
| EntrezGene:100776862 | Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02006591 | InterPro:AT_hook_DNA-bd_motif | EnsemblPlantsGene:GLYMA_10G178000 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | UniProt:I1LC26 | InterPro:IPR005175 |
| EnsemblPlants:KRH34345 | ProteinID:KRH34345 | ProteinID:KRH34345.1 | PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31500 | PANTHER:PTHR31500:SF18 | SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI000233D0C6 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:41125424..41132741
Molecular Weight (calculated)
34730.2 Da
IEP (calculated)
8.082
GRAVY (calculated)
-0.265
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRENFGVV VGDEAPESFH VAPRIENNLD FSRATVPAPA PPTEGKKKRG RPRKYGPDGK PALGAVTALS PMPISSSIPL TGEFSAWKRG RGRPVESIKK
101: SSFKFEVESP GPGEGIAYSV GANFTPHVLT VNAGEDVTMK IMSFSQQGSR AICILSATGT ISNVTLRQPS SCGGTLTYEG RFEILSLSGS FMPTENGVTR
201: SRSGGMSVSL AGPDGRVMGG GLAGLLVAAG PVQVVVASFL PGHQLEHKTK KQRVGHVSTI SPSPVNLITS EEIIVSFGGV KPIMTPAAFQ EENIASFNNG
301: QDYRNSSVDD KDPLPEKESN LSQSNAEAVC
101: SSFKFEVESP GPGEGIAYSV GANFTPHVLT VNAGEDVTMK IMSFSQQGSR AICILSATGT ISNVTLRQPS SCGGTLTYEG RFEILSLSGS FMPTENGVTR
201: SRSGGMSVSL AGPDGRVMGG GLAGLLVAAG PVQVVVASFL PGHQLEHKTK KQRVGHVSTI SPSPVNLITS EEIIVSFGGV KPIMTPAAFQ EENIASFNNG
301: QDYRNSSVDD KDPLPEKESN LSQSNAEAVC
001: MEEREGTNIN NNITSSFGLK QQHEAAASDG GYSMDPPPRP ENPNPFLVPP TTVPAAATVA AAVTENAATP FSLTMPTENT SAEQLKKKRG RPRKYNPDGT
101: LVVTLSPMPI SSSVPLTSEF PPRKRGRGRG KSNRWLKKSQ MFQFDRSPVD TNLAGVGTAD FVGANFTPHV LIVNAGEDVT MKIMTFSQQG SRAICILSAN
201: GPISNVTLRQ SMTSGGTLTY EGRFEILSLT GSFMQNDSGG TRSRAGGMSV CLAGPDGRVF GGGLAGLFLA AGPVQVMVGT FIAGQEQSQL ELAKERRLRF
301: GAQPSSISFN ISAEERKARF ERLNKSVAIP APTTSYTHVN TTNAVHSYYT NSVNHVKDPF SSIPVGGGGG GEVGEEEGEE DDDELEGEDE EFGGDSQSDN
401: EIPS
101: LVVTLSPMPI SSSVPLTSEF PPRKRGRGRG KSNRWLKKSQ MFQFDRSPVD TNLAGVGTAD FVGANFTPHV LIVNAGEDVT MKIMTFSQQG SRAICILSAN
201: GPISNVTLRQ SMTSGGTLTY EGRFEILSLT GSFMQNDSGG TRSRAGGMSV CLAGPDGRVF GGGLAGLFLA AGPVQVMVGT FIAGQEQSQL ELAKERRLRF
301: GAQPSSISFN ISAEERKARF ERLNKSVAIP APTTSYTHVN TTNAVHSYYT NSVNHVKDPF SSIPVGGGGG GEVGEEEGEE DDDELEGEDE EFGGDSQSDN
401: EIPS
Arabidopsis Description
AHL3AT-hook motif nuclear-localized protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.