Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- extracellular 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035899.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX87241 | Canola | nucleus | 97.19 | 97.44 |
| CDY00271 | Canola | nucleus | 85.97 | 83.62 |
| CDX86910 | Canola | nucleus | 84.95 | 83.46 |
| CDY30710 | Canola | nucleus | 80.1 | 78.3 |
| AT5G62260.3 | Thale cress | nucleus | 79.34 | 76.98 |
| KRH34345 | Soybean | nucleus | 36.99 | 43.94 |
| KRG92455 | Soybean | nucleus | 35.97 | 42.73 |
| CDY07239 | Canola | plasma membrane | 25.0 | 42.42 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 37.76 | 42.17 |
| KRH09229 | Soybean | nucleus | 36.99 | 42.15 |
| Solyc03g007150.2.1 | Tomato | nucleus | 34.44 | 41.54 |
| CDX94457 | Canola | nucleus | 39.8 | 41.27 |
| CDY38874 | Canola | nucleus | 44.39 | 41.13 |
| CDY32624 | Canola | nucleus | 44.39 | 41.04 |
| KRH38723 | Soybean | nucleus | 35.97 | 40.99 |
| CDX89422 | Canola | nucleus | 40.05 | 40.89 |
| CDX92693 | Canola | nucleus | 40.82 | 40.4 |
| CDY49703 | Canola | nucleus | 40.56 | 39.85 |
| PGSC0003DMT400071865 | Potato | plastid | 31.12 | 39.61 |
| CDY07238 | Canola | nucleus | 31.89 | 39.56 |
| CDY00488 | Canola | nucleus | 42.86 | 39.16 |
| PGSC0003DMT400079651 | Potato | nucleus | 33.93 | 38.44 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 32.91 | 38.39 |
| CDY04392 | Canola | nucleus | 26.02 | 38.06 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 36.48 | 37.53 |
| CDX84679 | Canola | nucleus | 25.0 | 37.4 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 25.0 | 37.4 |
| Os08t0118000-01 | Rice | nucleus | 35.2 | 37.1 |
| Solyc06g035430.2.1 | Tomato | nucleus | 32.65 | 36.99 |
| CDX91598 | Canola | nucleus | 39.54 | 36.99 |
| CDY65097 | Canola | nucleus | 39.54 | 36.99 |
| CDX99902 | Canola | nucleus | 41.33 | 36.9 |
| CDY47428 | Canola | nucleus | 29.08 | 36.89 |
| CDY41291 | Canola | nucleus | 28.06 | 36.07 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 29.85 | 35.56 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 34.44 | 35.34 |
| CDX98767 | Canola | nucleus | 29.59 | 35.26 |
| KXG24283 | Sorghum | plastid | 35.2 | 35.11 |
| CDX82971 | Canola | plastid | 18.88 | 34.42 |
| TraesCS7B01G215600.1 | Wheat | plastid | 34.44 | 34.26 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 33.93 | 34.1 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 33.93 | 34.02 |
| HORVU7Hr1G075040.1 | Barley | plastid | 33.67 | 33.59 |
| TraesCS7D01G312100.1 | Wheat | plastid | 33.67 | 33.25 |
| TraesCS7A01G315100.1 | Wheat | plastid | 33.67 | 33.17 |
| CDY01503 | Canola | cytosol | 21.43 | 32.43 |
| CDY26694 | Canola | cytosol, plastid | 19.39 | 29.01 |
| CDY41027 | Canola | cytosol | 19.64 | 28.95 |
| CDY25500 | Canola | nucleus | 27.3 | 28.92 |
| CDY42495 | Canola | nucleus | 24.74 | 28.7 |
| CDY58791 | Canola | nucleus | 23.98 | 28.66 |
| CDY26693 | Canola | plastid | 19.64 | 28.52 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 26.28 | 28.45 |
| CDX89109 | Canola | nucleus | 24.23 | 28.36 |
| CDY41028 | Canola | nucleus, plastid | 17.86 | 28.23 |
| CDY51561 | Canola | nucleus | 24.23 | 27.94 |
| CDY48928 | Canola | nucleus | 24.49 | 27.91 |
| CDX71746 | Canola | nucleus | 24.49 | 27.91 |
| CDY45364 | Canola | nucleus | 26.02 | 27.79 |
| CDY34355 | Canola | nucleus | 26.79 | 27.78 |
| CDY37704 | Canola | nucleus | 26.53 | 27.73 |
| CDY37070 | Canola | nucleus | 23.72 | 27.27 |
| CDY27354 | Canola | nucleus | 23.98 | 26.93 |
| CDY35172 | Canola | nucleus | 23.72 | 26.35 |
| CDY03203 | Canola | nucleus | 23.98 | 26.26 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 26.53 | 26.13 |
| CDY01506 | Canola | nucleus | 19.9 | 25.91 |
| CDY26692 | Canola | nucleus | 19.9 | 25.74 |
| CDX78814 | Canola | nucleus | 26.28 | 25.31 |
| CDY68252 | Canola | nucleus | 19.13 | 25.25 |
| CDY39751 | Canola | nucleus | 24.49 | 25.13 |
| CDY44500 | Canola | nucleus | 26.53 | 24.76 |
| CDY46385 | Canola | nucleus | 23.98 | 24.61 |
| CDY26691 | Canola | cytosol, plastid | 19.39 | 24.44 |
| CDY52506 | Canola | nucleus | 21.68 | 24.36 |
| CDY08882 | Canola | nucleus | 26.79 | 24.14 |
| CDX76549 | Canola | nucleus | 26.79 | 23.86 |
| CDY65362 | Canola | nucleus | 22.45 | 23.66 |
| CDY52477 | Canola | nucleus | 22.19 | 23.64 |
| CDY05594 | Canola | nucleus | 21.43 | 23.6 |
| CDY21122 | Canola | nucleus | 23.21 | 23.58 |
| CDY30005 | Canola | nucleus | 22.7 | 23.36 |
| CDY13231 | Canola | nucleus | 21.94 | 20.98 |
Protein Annotations
| EnsemblPlants:CDY16785 | EnsemblPlantsGene:GSBRNA2T00094664001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF18 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY16785 | ProteinID:CDY16785.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0002542094 | UniProt:A0A078FQN2 | MapMan:35.1 | : | : |
Description
BnaA09g05970DBnaA09g05970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQN2]
Coordinates
chrLK032067:-:363029..365085
Molecular Weight (calculated)
41455.8 Da
IEP (calculated)
8.815
GRAVY (calculated)
-0.558
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKGGMSPS GVITVKGDET LAPRTEFQQN PSFLPSVRPT TVVPPLPPAP ATVTPGSAAA APPPSISSAG TDLTKKKRGR PRKYAPDGSL NPRASRPTLS
101: PTPISSSIPF SGDYHHHSHW KRGKAHQQPV EFIKRSNKFE YESSPAPPPA GLSCYMGANF TTHQFTVNAG EDVTMKVMPY SQGSRAICIL SATGTISNVT
201: LRQPTTSGGT LTYEGRFEIL SLSGSFMPTE NCGTKGRSGG MSISLAGPNG KIIGGGLAGM LIAAGPVQVI MGSFIVMHQA EQTHKKKPRI MEACPPPPQP
301: QQQPPTFTIT TVNSTSPAVA TVEEPKQQTY GGGGTMRPLS QMPSSFHNDS ITTTYHGYGN MNTGATNYKE EDDYENGGDD DSGDTRSLSN SG
101: PTPISSSIPF SGDYHHHSHW KRGKAHQQPV EFIKRSNKFE YESSPAPPPA GLSCYMGANF TTHQFTVNAG EDVTMKVMPY SQGSRAICIL SATGTISNVT
201: LRQPTTSGGT LTYEGRFEIL SLSGSFMPTE NCGTKGRSGG MSISLAGPNG KIIGGGLAGM LIAAGPVQVI MGSFIVMHQA EQTHKKKPRI MEACPPPPQP
301: QQQPPTFTIT TVNSTSPAVA TVEEPKQQTY GGGGTMRPLS QMPSSFHNDS ITTTYHGYGN MNTGATNYKE EDDYENGGDD DSGDTRSLSN SG
001: MEEKGEISPS GVVTVKGDEA LVPRTEFQQN PSFLQFVSPT TVVTPLPPPP APSSAPVPTT VTPGSATAST GSDPTKKKRG RPRKYAPDGS LNPRFLRPTL
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
Arabidopsis Description
AHL6AT-hook motif nuclear-localized protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.