Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37704 | Canola | nucleus | 86.18 | 91.47 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 54.27 | 82.44 |
| CDX84679 | Canola | nucleus | 54.02 | 82.06 |
| AT2G33620.2 | Thale cress | nucleus | 64.57 | 73.22 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 51.01 | 57.51 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 46.73 | 51.67 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 46.98 | 51.23 |
| Os08t0512400-02 | Rice | nucleus | 44.72 | 50.28 |
| KXG25625 | Sorghum | nucleus | 46.48 | 49.6 |
| Os09t0491708-01 | Rice | nucleus | 44.47 | 49.3 |
| PGSC0003DMT400075370 | Potato | nucleus | 44.22 | 49.16 |
| GSMUA_Achr7P20540_001 | Banana | nucleus | 35.93 | 48.81 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 48.99 | 47.91 |
| Solyc12g094710.1.1 | Tomato | nucleus | 42.71 | 47.62 |
| TraesCS7A01G248500.1 | Wheat | nucleus | 43.97 | 47.3 |
| HORVU7Hr1G051150.4 | Barley | nucleus | 43.22 | 46.87 |
| TraesCS7D01G247300.2 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 43.47 | 46.76 |
| TraesCS7B01G143000.1 | Wheat | nucleus | 42.21 | 46.54 |
| OQU89696 | Sorghum | nucleus | 44.22 | 46.19 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 48.24 | 45.61 |
| Zm00001d052901_P002 | Maize | nucleus | 41.96 | 45.26 |
| Zm00001d031481_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 45.23 | 43.69 |
| Zm00001d037425_P001 | Maize | nucleus | 35.93 | 40.06 |
| HORVU5Hr1G073550.1 | Barley | nucleus, peroxisome, plastid | 39.45 | 40.05 |
| OQU76344 | Sorghum | nucleus | 36.18 | 39.78 |
| Zm00001d006034_P003 | Maize | nucleus | 42.96 | 39.77 |
| KRH51558 | Soybean | nucleus | 35.18 | 39.44 |
| Os06t0326000-01 | Rice | nucleus | 36.93 | 38.89 |
| KRH60876 | Soybean | nucleus | 34.67 | 38.66 |
| CDY01503 | Canola | cytosol | 24.12 | 37.07 |
| CDY07239 | Canola | plasma membrane | 21.36 | 36.8 |
| CDY47428 | Canola | nucleus | 27.64 | 35.6 |
| CDY04392 | Canola | nucleus | 23.62 | 35.07 |
| CDY41291 | Canola | nucleus | 26.13 | 34.1 |
| CDX82971 | Canola | plastid | 18.09 | 33.49 |
| CDY07238 | Canola | nucleus | 25.88 | 32.59 |
| CDX98767 | Canola | nucleus | 26.38 | 31.91 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 26.38 | 31.91 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 28.39 | 31.22 |
| CDY41028 | Canola | nucleus, plastid | 19.35 | 31.05 |
| CDX78814 | Canola | nucleus | 31.66 | 30.96 |
| CDY41027 | Canola | cytosol | 20.6 | 30.83 |
| CDY45364 | Canola | nucleus | 28.14 | 30.52 |
| TraesCS7B01G035400.1 | Wheat | cytosol | 15.33 | 30.5 |
| CDY03203 | Canola | nucleus | 27.39 | 30.45 |
| CDY35172 | Canola | nucleus | 26.88 | 30.31 |
| CDY25500 | Canola | nucleus | 27.89 | 30.0 |
| TraesCS7A01G134300.1 | Wheat | cytosol | 14.82 | 29.95 |
| CDX89109 | Canola | nucleus | 25.13 | 29.85 |
| CDY44500 | Canola | nucleus | 31.41 | 29.76 |
| CDY48928 | Canola | nucleus | 25.63 | 29.65 |
| CDX71746 | Canola | nucleus | 25.63 | 29.65 |
| CDY37070 | Canola | nucleus | 25.38 | 29.62 |
| CDY42495 | Canola | nucleus | 25.13 | 29.59 |
| CDY58791 | Canola | nucleus | 24.37 | 29.57 |
| CDY27354 | Canola | nucleus | 25.88 | 29.51 |
| CDY26694 | Canola | cytosol, plastid | 19.35 | 29.39 |
| CDY26693 | Canola | plastid | 19.85 | 29.26 |
| CDY08882 | Canola | nucleus | 31.91 | 29.2 |
| CDX76549 | Canola | nucleus | 31.91 | 28.86 |
| CDX94457 | Canola | nucleus | 27.39 | 28.84 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 23.62 | 28.83 |
| HORVU7Hr1G027950.1 | Barley | extracellular, mitochondrion, plasma membrane | 17.09 | 28.69 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 13.82 | 28.65 |
| CDY38874 | Canola | nucleus | 30.4 | 28.61 |
| CDY51561 | Canola | nucleus | 24.37 | 28.53 |
| CDY26692 | Canola | nucleus | 21.61 | 28.38 |
| CDY34355 | Canola | nucleus | 26.88 | 28.31 |
| CDX92693 | Canola | nucleus | 28.14 | 28.28 |
| CDX89422 | Canola | nucleus | 27.14 | 28.12 |
| CDY49703 | Canola | nucleus | 28.14 | 28.07 |
| CDY32624 | Canola | nucleus | 29.9 | 28.07 |
| CDY01506 | Canola | nucleus | 21.11 | 27.91 |
| CDY65097 | Canola | nucleus | 29.15 | 27.68 |
| CDY68252 | Canola | nucleus | 20.6 | 27.61 |
| CDY00488 | Canola | nucleus | 29.65 | 27.51 |
| TraesCS7D01G133700.1 | Wheat | cytosol | 15.58 | 26.96 |
| CDX91598 | Canola | nucleus | 28.14 | 26.73 |
| CDY16785 | Canola | nucleus | 26.13 | 26.53 |
| CDX99902 | Canola | nucleus | 29.15 | 26.42 |
| CDX87241 | Canola | nucleus | 25.63 | 26.09 |
| CDX86910 | Canola | nucleus | 26.13 | 26.07 |
| CDY00271 | Canola | nucleus | 26.38 | 26.05 |
| CDY26691 | Canola | cytosol, plastid | 20.35 | 26.05 |
| TraesCS7D01G134100.1 | Wheat | nucleus | 23.62 | 25.97 |
| TraesCS7B01G035900.1 | Wheat | nucleus | 23.12 | 25.34 |
| CDY30710 | Canola | nucleus | 25.13 | 24.94 |
| CDY52506 | Canola | nucleus | 21.86 | 24.93 |
| CDY46385 | Canola | nucleus | 23.87 | 24.87 |
| CDY39751 | Canola | nucleus | 23.87 | 24.87 |
| CDY65362 | Canola | nucleus | 23.12 | 24.73 |
| CDY52477 | Canola | nucleus | 22.86 | 24.73 |
| CDY05594 | Canola | nucleus | 22.11 | 24.72 |
| CDY21122 | Canola | nucleus | 23.62 | 24.35 |
| HORVU7Hr1G028110.15 | Barley | plasma membrane | 22.11 | 23.72 |
| CDY30005 | Canola | nucleus | 22.61 | 23.62 |
| CDY13231 | Canola | nucleus | 22.36 | 21.71 |
Protein Annotations
| EnsemblPlants:CDY23720 | EnsemblPlantsGene:GSBRNA2T00024043001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF0 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY23720 | ProteinID:CDY23720.1 | SEG:seg |
| SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI0004EDF651 | UniProt:A0A078GB90 | MapMan:35.1 | : |
Description
BnaC04g44020DBnaC04g44020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GB90]
Coordinates
chrLK032148:-:16390..20495
Molecular Weight (calculated)
41430.1 Da
IEP (calculated)
10.283
GRAVY (calculated)
-0.375
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRTVLSCTG ILFNAIVLFF IVRRKGEGIF FALFPEFSQL SDGTMSGSET GLTAANREPM PFPMGLHHQH NQPPPPPPQQ NSQNMQLSFT GADRTAVYKP
101: MSSDSPPPQQ QYQRHSPGGL NMNVPVTGGE QRVKKRRGRP RKYEPGSGEA SLGFVPGPPS YTVSQPSGGG DGGGSGGGGG ASPSVKRMRG RPSGSSNRPK
201: LQALGSTGVG FTPHILTVST GEDVSSKIMA FSQNGPRAVC VLSANGAISN VTLRQAATSG GTVTYEGRFE ILSLSGSFLL LENNGHRSRT GGLSVSLSAP
301: DGNVLGGCVA GLLIAASPVQ IVVGSFIPDG QKEHVGQMEL ASPALPRVAP SHVLTTPNSQ QARGAMSESS CGGHGSHLQQ STGGPYNNNS NNLSMPWK
101: MSSDSPPPQQ QYQRHSPGGL NMNVPVTGGE QRVKKRRGRP RKYEPGSGEA SLGFVPGPPS YTVSQPSGGG DGGGSGGGGG ASPSVKRMRG RPSGSSNRPK
201: LQALGSTGVG FTPHILTVST GEDVSSKIMA FSQNGPRAVC VLSANGAISN VTLRQAATSG GTVTYEGRFE ILSLSGSFLL LENNGHRSRT GGLSVSLSAP
301: DGNVLGGCVA GLLIAASPVQ IVVGSFIPDG QKEHVGQMEL ASPALPRVAP SHVLTTPNSQ QARGAMSESS CGGHGSHLQQ STGGPYNNNS NNLSMPWK
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.