Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G247300.2 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 98.11 | 98.11 |
| TraesCS7B01G143000.1 | Wheat | nucleus | 95.68 | 98.06 |
| HORVU7Hr1G051150.4 | Barley | nucleus | 95.68 | 96.46 |
| KXG25625 | Sorghum | nucleus | 76.76 | 76.14 |
| Os08t0512400-02 | Rice | nucleus | 72.43 | 75.71 |
| Zm00001d052901_P002 | Maize | nucleus | 72.43 | 72.63 |
| Zm00001d031481_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 71.89 | 64.56 |
| Bra022946.1-P | Field mustard | nucleus | 41.08 | 58.02 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 40.81 | 57.63 |
| CDX84679 | Canola | nucleus | 40.81 | 57.63 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 54.05 | 55.56 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 54.05 | 54.79 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 52.16 | 54.67 |
| PGSC0003DMT400075370 | Potato | nucleus | 49.46 | 51.12 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 56.22 | 51.11 |
| TraesCS5A01G267000.1 | Wheat | nucleus, peroxisome, vacuole | 54.59 | 50.88 |
| AT2G33620.2 | Thale cress | nucleus | 47.84 | 50.43 |
| Solyc12g094710.1.1 | Tomato | nucleus | 48.11 | 49.86 |
| Bra021865.1-P | Field mustard | nucleus | 46.76 | 49.43 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 52.97 | 46.56 |
| CDY37704 | Canola | nucleus | 47.03 | 46.4 |
| KRH51558 | Soybean | nucleus | 43.78 | 45.63 |
| KRH60876 | Soybean | nucleus | 43.24 | 44.82 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 47.3 | 43.97 |
| TraesCS2A01G449500.1 | Wheat | plastid | 41.08 | 37.07 |
| TraesCS1A01G190900.1 | Wheat | nucleus | 42.16 | 34.36 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 28.11 | 33.88 |
| TraesCS7A01G315100.1 | Wheat | plastid | 34.32 | 31.91 |
| TraesCS5A01G130500.1 | Wheat | plastid | 31.08 | 31.17 |
| TraesCS7A01G134300.1 | Wheat | cytosol | 16.49 | 30.96 |
| TraesCS6A01G083100.1 | Wheat | cytosol, nucleus, peroxisome | 32.43 | 30.3 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 15.41 | 29.69 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 24.32 | 27.61 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 30.0 | 27.48 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 35.95 | 25.05 |
| TraesCS5A01G266900.1 | Wheat | cytosol | 0.54 | 1.71 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G248500.1 | EnsemblPlantsGene:TraesCS7A01G248500 | Gene3D:3.30.1330.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:AT_hook_DNA-bd_motif | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF13 |
| PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SMART:SM00384 | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:230300066..230303173
Molecular Weight (calculated)
36830.7 Da
IEP (calculated)
10.980
GRAVY (calculated)
-0.258
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVRSEQGLM AGRDLFGLPK SQPAPASAAP AAPPSSAAMQ SMRMAYTADG TPVFAPVSSA VAPPGYQPAG SAAPAHGSSM SAARAPGGNG VAAPPGMGEP
101: SAKKKRGRPR KYGPDAAMSL ALVTVPTAAG SPAVTQGASG RPFSPTLPGN FVPSASPDGG KKRGRPKGST NKPRVDGAGP AGVGFTPHVL TVQAGEDVSS
201: KIMSFSQNGT RAVCVLSANG SISNVTLRQT GTSGGTVTYE GRFEILSLSG SIFVTDNGGQ RTRTGGLSVS LAGPDGRLLG GGVAGLLIAA SPIQIVVGSF
301: NACGKKEPKP QAPSEPVPLK VVPSTGMAAN SPPSRGTLSE SSGGTASPRH QGYASNNNNQ PPILSSMPWK
101: SAKKKRGRPR KYGPDAAMSL ALVTVPTAAG SPAVTQGASG RPFSPTLPGN FVPSASPDGG KKRGRPKGST NKPRVDGAGP AGVGFTPHVL TVQAGEDVSS
201: KIMSFSQNGT RAVCVLSANG SISNVTLRQT GTSGGTVTYE GRFEILSLSG SIFVTDNGGQ RTRTGGLSVS LAGPDGRLLG GGVAGLLIAA SPIQIVVGSF
301: NACGKKEPKP QAPSEPVPLK VVPSTGMAAN SPPSRGTLSE SSGGTASPRH QGYASNNNNQ PPILSSMPWK
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.