Factsheet for TraesCS5A01G267000.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, peroxisome, nucleus

Predictor Summary:

nucleus 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, vacuole
Any Predictor:	nucleus, peroxisome, vacuole
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G266600.1	Wheat	endoplasmic reticulum, mitochondrion, nucleus, peroxisome	96.47	96.96
TraesCS5D01G274900.1	Wheat	plastid	71.03	96.25
TraesCS7A01G248500.1	Wheat	nucleus	50.88	54.59
Zm00001d020951_P002	Maize	cytosol, nucleus, peroxisome, plastid	45.34	53.73
Solyc02g038760.2.1	Tomato	nucleus	32.24	39.26
PGSC0003DMT400059682	Potato	nucleus	31.99	38.96
TraesCS2A01G449500.1	Wheat	plastid	38.79	37.56
PGSC0003DMT400035486	Potato	nucleus, plastid	22.92	34.87
TraesCS7A01G565900.1	Wheat	nucleus	26.95	34.85
TraesCS1A01G190900.1	Wheat	nucleus	38.79	33.92
TraesCS5A01G130500.1	Wheat	plastid	30.23	32.52
TraesCS7A01G134300.1	Wheat	cytosol	15.62	31.47
Solyc02g082300.2.1	Tomato	nucleus, plastid	20.4	31.03
TraesCS7A01G315100.1	Wheat	plastid	30.48	30.4
TraesCS6A01G083100.1	Wheat	cytosol, nucleus, peroxisome	28.21	28.28
TraesCS2A01G582300.1	Wheat	nucleus	26.95	26.49
TraesCS6A01G403700.1	Wheat	nucleus	29.97	22.41
TraesCS5A01G266900.1	Wheat	cytosol	0.5	1.71
TraesCS5B01G266500.1	Wheat	cytosol	0.5	1.71
TraesCS5D01G274800.1	Wheat	cytosol	0.5	1.71
Zm00001d020950_P001	Maize	cytosol	0.5	1.71

Protein Annotations

EnsemblPlants:TraesCS5A01G267000.1	EnsemblPlantsGene:TraesCS5A01G267000	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31500
PANTHER:PTHR31500:SF13	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856	TIGR:cd11378
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:478323064..478325982

Molecular Weight (calculated)

39795.6 Da

IEP (calculated)

9.919

GRAVY (calculated)

-0.160

Length

397 amino acids

Sequence
(BLAST)

001: MMEVRASQEQ QGGMAGREPF GLPSSPPTPQ SSGPVPNMRM TYGEDGNAYF LKPGSAPPPA EAYQPGGGAG LDMPAGPDAA AAGGNGGPAF ELNMEEEAAK
101: KRGRAMKYGD DGNTSLALVP VPMPEEPTAV APCGSGAFPQ PAVKPAAGGV LAVPPAGMKK RGRPKGSTNK VKKQDKVMSA LAFIGTAGAG FTPHVIAVQA
201: GEDVAAKILS FAQHGVRAVV VLSANGAISN VTLRQSATSG GTVTYEGRFE ILSLSGSFTV QETGGHRSRT GGLSVSLASP DGRVLGGGIA GLLIACTPIQ
301: VVVGTFNTVA EKKKAPKHQA AAAAHEPASA PPRMTPSFVP APIAVPPLAP APISVGMAQN SPPSRGTLSE SSGSPMNQGV PAAATPSNSG LSSMPWK

Best Arabidopsis Sequence Match ( AT4G25320.1 )
(BLAST)

001: MEEREGTNIN NNITSSFGLK QQHEAAASDG GYSMDPPPRP ENPNPFLVPP TTVPAAATVA AAVTENAATP FSLTMPTENT SAEQLKKKRG RPRKYNPDGT
101: LVVTLSPMPI SSSVPLTSEF PPRKRGRGRG KSNRWLKKSQ MFQFDRSPVD TNLAGVGTAD FVGANFTPHV LIVNAGEDVT MKIMTFSQQG SRAICILSAN
201: GPISNVTLRQ SMTSGGTLTY EGRFEILSLT GSFMQNDSGG TRSRAGGMSV CLAGPDGRVF GGGLAGLFLA AGPVQVMVGT FIAGQEQSQL ELAKERRLRF
301: GAQPSSISFN ISAEERKARF ERLNKSVAIP APTTSYTHVN TTNAVHSYYT NSVNHVKDPF SSIPVGGGGG GEVGEEEGEE DDDELEGEDE EFGGDSQSDN
401: EIPS

Arabidopsis Description

AHL3AT-hook motif nuclear-localized protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.