Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 96.83 | 96.36 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 96.59 | 96.12 |
| HORVU2Hr1G105800.13 | Barley | cytosol, vacuole | 68.05 | 90.88 |
| HORVU7Hr1G065300.2 | Barley | mitochondrion, plastid | 38.29 | 83.07 |
| OQU82226 | Sorghum | plastid | 69.27 | 81.84 |
| Os04t0589900-01 | Rice | nucleus | 75.37 | 81.53 |
| Zm00001d026036_P001 | Maize | nucleus | 72.2 | 73.63 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 28.29 | 61.05 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 43.41 | 50.57 |
| VIT_02s0012g00900.t01 | Wine grape | nucleus | 42.2 | 49.01 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 42.2 | 48.46 |
| Solyc04g053090.1.1 | Tomato | plastid | 19.02 | 46.15 |
| PGSC0003DMT400045147 | Potato | plastid | 35.61 | 44.24 |
| TraesCS1A01G190900.1 | Wheat | nucleus | 46.83 | 42.29 |
| Solyc04g053100.1.1 | Tomato | plastid | 17.07 | 42.17 |
| KRH58200 | Soybean | nucleus | 36.59 | 41.44 |
| TraesCS7A01G248500.1 | Wheat | nucleus | 37.07 | 41.08 |
| KRH04337 | Soybean | nucleus | 34.63 | 39.89 |
| TraesCS5A01G267000.1 | Wheat | nucleus, peroxisome, vacuole | 37.56 | 38.79 |
| CDY01503 | Canola | cytosol | 24.39 | 38.61 |
| KRH77206 | Soybean | nucleus | 31.46 | 38.17 |
| Solyc08g077030.2.1 | Tomato | nucleus | 38.05 | 38.14 |
| PGSC0003DMT400052826 | Potato | nucleus | 33.41 | 38.06 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 28.29 | 37.78 |
| KRH28286 | Soybean | plastid | 31.22 | 37.76 |
| AT5G46640.1 | Thale cress | nucleus | 33.66 | 35.75 |
| CDY41028 | Canola | nucleus, plastid | 20.49 | 33.87 |
| CDY41027 | Canola | cytosol | 21.95 | 33.83 |
| CDY03203 | Canola | nucleus | 29.51 | 33.8 |
| CDY68252 | Canola | nucleus | 24.39 | 33.67 |
| TraesCS5A01G130500.1 | Wheat | plastid | 30.24 | 33.6 |
| Bra025716.1-P | Field mustard | nucleus | 21.95 | 33.46 |
| CDY35172 | Canola | nucleus | 28.54 | 33.14 |
| Bra017536.1-P | Field mustard | nucleus | 28.54 | 33.14 |
| Solyc08g006950.2.1 | Tomato | nucleus | 31.46 | 32.99 |
| CDY26693 | Canola | plastid | 21.71 | 32.96 |
| Bra021027.1-P | Field mustard | nucleus | 32.68 | 32.68 |
| CDX78814 | Canola | nucleus | 32.44 | 32.68 |
| CDY26694 | Canola | cytosol, plastid | 20.73 | 32.44 |
| CDY26692 | Canola | nucleus | 23.9 | 32.34 |
| Bra025717.1-P | Field mustard | nucleus | 23.9 | 32.34 |
| CDY01506 | Canola | nucleus | 23.66 | 32.23 |
| CDY08882 | Canola | nucleus | 33.9 | 31.95 |
| CDY44500 | Canola | nucleus | 32.68 | 31.9 |
| CDY26691 | Canola | cytosol, plastid | 24.15 | 31.83 |
| CDX76549 | Canola | nucleus | 33.9 | 31.59 |
| Bra025718.1-P | Field mustard | nucleus, plastid | 23.41 | 31.58 |
| TraesCS7A01G315100.1 | Wheat | plastid | 30.24 | 31.16 |
| AT4G17950.1 | Thale cress | nucleus | 33.17 | 30.98 |
| TraesCS7A01G134300.1 | Wheat | cytosol | 14.63 | 30.46 |
| Bra013270.1-P | Field mustard | nucleus | 31.22 | 30.05 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 28.78 | 29.21 |
| TraesCS6A01G083100.1 | Wheat | cytosol, nucleus, peroxisome | 26.83 | 27.78 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 34.39 | 26.55 |
| TraesCS5A01G266900.1 | Wheat | cytosol | 0.98 | 3.42 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G449500.1 | EnsemblPlantsGene:TraesCS2A01G449500 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF25 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:699511507..699514961
Molecular Weight (calculated)
41404.0 Da
IEP (calculated)
9.571
GRAVY (calculated)
-0.438
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRAQPQQQ QTPLPLPLPP PPQQTTPPPT PQTQTPRVSS PPPVAPGVMM PQHAYGAMPP GSASVMHGMP LAFNPMASPG ASQAALKPAD MPPLAMYRPD
101: STPPGMPQSV GGGGGALVVS VSGSGSGGEL VKKKRGRPRK YGPDGTMGSA VKAEAGGQSG GAGSNSNPDG KRRGRPPGSG KKKQLDALGS AGTSFTPHII
201: TVKPNEDVAS KIMSFSQQGP RTTCIISANG ALCTATLRQP ATSGGIVTYE GHFDILSLSG SFLLAEDGDT RSRTGGLSVA LAGSDGRIVG GCVAGMLMAA
301: TPVQVVVGSF IAEGNKKPKE EQPKREPTSA PMLTSAPMQT PAGFGAASAA ATPSDGTSSD HSDDPGSPMG PNGSTFNNAG HPTHASYAPV GWSLSGNQGR
401: YDPDMKMVTD
101: STPPGMPQSV GGGGGALVVS VSGSGSGGEL VKKKRGRPRK YGPDGTMGSA VKAEAGGQSG GAGSNSNPDG KRRGRPPGSG KKKQLDALGS AGTSFTPHII
201: TVKPNEDVAS KIMSFSQQGP RTTCIISANG ALCTATLRQP ATSGGIVTYE GHFDILSLSG SFLLAEDGDT RSRTGGLSVA LAGSDGRIVG GCVAGMLMAA
301: TPVQVVVGSF IAEGNKKPKE EQPKREPTSA PMLTSAPMQT PAGFGAASAA ATPSDGTSSD HSDDPGSPMG PNGSTFNNAG HPTHASYAPV GWSLSGNQGR
401: YDPDMKMVTD
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.