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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, cytosol, nucleus, plastid

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
  • plastid 2
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, nucleus, plastid
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:extracellular
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P03070_001
GSMUA_Achr4P16720_001
GSMUA_Achr4P30000_001
GSMUA_Achr5P20630_001
GSMUA_Achr8P11400_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G17950.1 GSMUA_Achr11P... AT1G63470.1 21798944
AT4G17950.1 GSMUA_Achr11P... AT1G63470.1 21798944
AT4G17950.1 GSMUA_Achr1P03070_001 AT1G63470.1 21798944
AT4G17950.1 GSMUA_Achr4P30000_001 AT1G63470.1 21798944
AT4G17950.1 GSMUA_Achr5P20630_001 AT1G63470.1 21798944
AT4G17950.1 GSMUA_Achr8P11400_001 AT1G63470.1 21798944
AT4G17950.1 GSMUA_Achr4P16720_001 AT3G51780.1 21798944
AT4G17950.1 GSMUA_AchrUn_... AT3G51780.1 21798944
AT4G17950.1 GSMUA_Achr11P... AT3G61310.1 21798944
AT4G17950.1 GSMUA_Achr11P... AT3G61310.1 21798944
AT4G17950.1 GSMUA_Achr1P03070_001 AT3G61310.1 21798944
AT4G17950.1 GSMUA_Achr4P30000_001 AT3G61310.1 21798944
AT4G17950.1 GSMUA_Achr5P20630_001 AT3G61310.1 21798944
AT4G17950.1 GSMUA_Achr8P11400_001 AT3G61310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P03370_001 Banana mitochondrion, plastid 48.58 90.0
GSMUA_Achr2P09840_001 Banana nucleus 78.41 77.31
Os10t0572900-02 Rice nucleus 48.01 67.33
HORVU2Hr1G105800.13 Barley cytosol, vacuole 47.16 54.07
HORVU7Hr1G065300.2 Barley mitochondrion, plastid 28.69 53.44
OQU82226 Sorghum plastid 50.0 50.72
KXG38867 Sorghum plastid 59.94 49.88
Zm00001d030053_P003 Maize plastid 59.09 49.88
GSMUA_Achr7P20540_001 Banana nucleus 41.48 49.83
GSMUA_Achr3P03710_001 Banana nucleus 51.42 49.59
VIT_02s0012g00900.t01 Wine grape nucleus 49.72 49.58
GSMUA_Achr6P03420_001 Banana nucleus 50.28 49.17
Zm00001d047042_P004 Maize cytosol, nucleus, plasma membrane 59.38 48.72
PGSC0003DMT400045147 Potato plastid 45.17 48.18
Os04t0589900-01 Rice nucleus 51.7 48.02
GSMUA_Achr9P12360_001 Banana extracellular, vacuole 54.26 46.93
TraesCS1B01G206100.2 Wheat nucleus 59.66 46.56
TraesCS1A01G190900.1 Wheat nucleus 59.66 46.26
TraesCS1D01G194900.2 Wheat nucleus 59.66 46.26
Solyc04g053090.1.1 Tomato plastid 22.16 46.15
Zm00001d026036_P001 Maize nucleus 51.99 45.52
HORVU1Hr1G049980.12 Barley nucleus 59.66 45.26
KRH58200 Soybean nucleus 45.74 44.48
TraesCS2B01G470900.1 Wheat cytosol, nucleus, peroxisome, plastid 50.85 43.45
TraesCS2A01G449500.1 Wheat plastid 50.57 43.41
Solyc04g053100.1.1 Tomato plastid 20.45 43.37
TraesCS2D01G448900.1 Wheat cytosol, nucleus, peroxisome, plastid 50.28 42.96
GSMUA_Achr1P03070_001 Banana cytosol, extracellular, nucleus 23.86 42.86
GSMUA_Achr5P20630_001 Banana nucleus, plasma membrane, plastid 40.06 42.34
KRH04337 Soybean nucleus 42.61 42.13
CDY01503 Canola cytosol 30.4 41.31
KRH28286 Soybean plastid 39.77 41.3
GSMUA_Achr5P23820_001 Banana cytosol, nucleus, plasma membrane 48.86 40.86
Solyc08g077030.2.1 Tomato nucleus 46.59 40.1
KRH77206 Soybean nucleus 38.35 39.94
GSMUA_Achr10P... Banana cytosol, nucleus, peroxisome 37.22 38.99
PGSC0003DMT400052826 Potato nucleus 39.77 38.89
GSMUA_Achr8P11400_001 Banana nucleus 38.07 38.73
GSMUA_Achr2P20250_001 Banana cytosol, peroxisome, plastid 40.34 38.69
GSMUA_Achr7P06500_001 Banana cytosol, plasma membrane, plastid 36.93 38.69
AT5G46640.1 Thale cress nucleus 41.76 38.08
GSMUA_Achr11P... Banana nucleus 39.2 37.2
GSMUA_Achr11P... Banana nucleus 39.2 36.8
GSMUA_Achr6P13410_001 Banana cytosol, nucleus, peroxisome 38.07 36.61
CDY03203 Canola nucleus 36.36 35.75
CDY35172 Canola nucleus 35.51 35.41
Bra017536.1-P Field mustard nucleus 35.51 35.41
GSMUA_Achr1P19840_001 Banana nucleus 38.07 35.17
CDX78814 Canola nucleus 40.62 35.14
GSMUA_Achr4P30000_001 Banana nucleus 32.1 34.66
Bra021027.1-P Field mustard nucleus 39.77 34.15
CDY41027 Canola cytosol 25.57 33.83
Solyc08g006950.2.1 Tomato nucleus 37.5 33.76
GSMUA_AchrUn_... Banana cytosol, nucleus, plastid 36.36 33.51
CDY08882 Canola nucleus 40.91 33.1
CDY44500 Canola nucleus 39.49 33.1
AT4G17950.1 Thale cress nucleus 41.19 33.03
CDY26694 Canola cytosol, plastid 24.43 32.82
CDY41028 Canola nucleus, plastid 23.01 32.66
CDX76549 Canola nucleus 40.62 32.5
Bra025717.1-P Field mustard nucleus 27.84 32.34
CDY26692 Canola nucleus 27.84 32.34
Bra025716.1-P Field mustard nucleus 24.72 32.34
CDY68252 Canola nucleus 27.27 32.32
CDY01506 Canola nucleus 27.56 32.23
CDY26693 Canola plastid 24.72 32.22
GSMUA_Achr2P03170_001 Banana cytosol, peroxisome, plasma membrane 34.38 31.03
Bra025718.1-P Field mustard nucleus, plastid 26.7 30.92
Bra013270.1-P Field mustard nucleus 37.22 30.75
CDY26691 Canola cytosol, plastid 26.7 30.23
GSMUA_Achr3P03040_001 Banana nucleus, peroxisome, plasma membrane 38.35 27.89
Protein Annotations
EnsemblPlants:GSMUA_Achr4P27240_001EnsemblPlants:GSMUA_Achr4T27240_001EnsemblPlantsGene:GSMUA_Achr4G27240_001Gene3D:3.30.1330.80InterPro:IPR005175InterPro:PPC_dom
PANTHER:PTHR31500PANTHER:PTHR31500:SF25PFAM:PF03479PFscan:PS51742SEG:segSUPFAM:SSF117856
UniParc:UPI0002965439UniProt:M0SSI6MapMan:35.1:::
Description
AT-hook protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G27240_001]
Coordinates
chr4:-:26155784..26162047
Molecular Weight (calculated)
35812.4 Da
IEP (calculated)
10.008
GRAVY (calculated)
-0.296
Length
352 amino acids
Sequence
(BLAST)
001: MDAREPPRVS SSQPPSVVVG SGSFGAGATN SPMVAPNSAG MMQEGMRLSF NPMPSAVTKT VDMTASLYQG DGFSGMRPGG IFNVGEPVKK KRGRPRKYGP
101: DGSMALALTP PSSASGYSNN PADPAAKRRG RPPGSGKKQQ LDALGAPGIG FTPHVITVKV GEASTSKIMA FSQQGPRTVC ILSANGAVSD VTLRQPAISG
201: GTVTYEGRFE IISLSGSFLL TEDGSTRSRS GGLSVALAGS DGRILGGGVA GMLVAATPVQ VVVGSFIAEG KKPKPEPLRW EPSSAPPQMP GFGAAVTASP
301: PSEGTSSESS EDPGSPTNQS VGTCNNSGQH VQPAYPPVSW SHSANLNGMN LT
Best Arabidopsis Sequence Match ( AT5G46640.1 )
(BLAST)
001: MDSRDIPPSH NQLQPPPGML MSHYRNPNAA ASPLMVPTST SQPIQHPRLP FGNQQQSQTF HQQQQQQMDQ KTLESLGFGD GSPSSQPMRF GIDDQNQQLQ
101: VKKKRGRPRK YTPDGSIALG LAPTSPLLSA ASNSYGEGGV GDSGGNGNSV DPPVKRNRGR PPGSSKKQLD ALGGTSGVGF TPHVIEVNTG EDIASKVMAF
201: SDQGSRTICI LSASGAVSRV MLRQASHSSG IVTYEGRFEI ITLSGSVLNY EVNGSTNRSG NLSVALAGPD GGIVGGSVVG NLVAATQVQV IVGSFVAEAK
301: KPKQSSVNIA RGQNPEPASA PANMLNFGSV SQGPSSESSE ENESGSPAMH RDNNNGIYGA QQQQQQQPLH PHQMQMYQHL WSNHGQ
Arabidopsis Description
AHL8AT-hook motif nuclear-localized protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIR1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.