Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 73.5 | 80.06 |
| GSMUA_Achr2P20250_001 | Banana | cytosol, peroxisome, plastid | 63.11 | 62.94 |
| GSMUA_Achr7P20540_001 | Banana | nucleus | 36.61 | 45.73 |
| GSMUA_Achr3P03040_001 | Banana | nucleus, peroxisome, plasma membrane | 60.11 | 45.45 |
| VIT_08s0007g04020.t01 | Wine grape | nucleus | 44.26 | 44.88 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 23.22 | 44.74 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 42.9 | 43.61 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 39.62 | 43.54 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 39.62 | 43.15 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 22.95 | 42.86 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 42.35 | 42.47 |
| Zm00001d052495_P001 | Maize | cytosol, nucleus, peroxisome | 39.34 | 40.79 |
| Zm00001d004924_P001 | Maize | cytosol | 39.89 | 40.78 |
| Os11t0149100-01 | Rice | cytosol, nucleus, peroxisome | 40.44 | 40.44 |
| KRH20019 | Soybean | nucleus | 41.8 | 40.37 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 44.26 | 39.8 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 41.26 | 39.63 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 37.43 | 39.6 |
| EES15662 | Sorghum | cytosol, nucleus, peroxisome | 37.98 | 39.04 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 40.44 | 38.74 |
| EES07975 | Sorghum | cytosol | 38.25 | 38.67 |
| GSMUA_Achr11P... | Banana | nucleus | 39.62 | 38.67 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 34.15 | 38.34 |
| TraesCS5D01G138000.1 | Wheat | plastid | 38.25 | 38.15 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 36.61 | 38.07 |
| Os12t0147000-00 | Rice | nucleus | 39.62 | 38.06 |
| TraesCS5B01G130400.1 | Wheat | plastid | 38.25 | 38.04 |
| GSMUA_Achr11P... | Banana | nucleus | 38.52 | 38.01 |
| KRH32644 | Soybean | plastid | 40.71 | 37.63 |
| TraesCS5B01G129200.1 | Wheat | plastid | 37.7 | 37.6 |
| TraesCS5A01G130500.1 | Wheat | plastid | 37.7 | 37.4 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 35.79 | 36.69 |
| HORVU5Hr1G041290.4 | Barley | cytosol, nucleus, peroxisome | 37.16 | 36.46 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 41.26 | 35.87 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 37.7 | 35.38 |
| PGSC0003DMT400007056 | Potato | nucleus | 38.25 | 34.48 |
| Solyc09g008940.2.1 | Tomato | nucleus | 38.52 | 33.81 |
| KRH25156 | Soybean | cytosol | 21.04 | 29.62 |
| KRH30520 | Soybean | nucleus | 25.96 | 25.68 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P13410_001 | EnsemblPlants:GSMUA_Achr6T13410_001 | EnsemblPlantsGene:GSMUA_Achr6G13410_001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31500 | PANTHER:PTHR31500:SF14 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 |
| UniParc:UPI000296BF6A | UniProt:M0T6N9 | MapMan:35.1 | : | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr6G13410_001]
Coordinates
chr6:-:8925945..8930445
Molecular Weight (calculated)
37100.5 Da
IEP (calculated)
7.221
GRAVY (calculated)
-0.264
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MEERESVVVS GCEGGGGGAG EAKEYSVSSA APLSPTRSLP PALSSGVVGA MGITVPPTEG AGLAMGMLGS GGSSGGEGDL FARKKRGRPR KYGPDGMALA
101: LSPTSGSASP FSPASSDGKR GRGRPPGSGK RQLLEALGDW FAHSAGGSFT PHVVTIATGE DVAAKIHSFS QKGPRAICIL SANGVISNVT LRQPGSSGGT
201: LTYEGRFEIL SLSGSFTITE TGGIRSRTGG ISVSLAGPDG RVIGGGVTGL LLAASPIQVV VGSFMPNTFK EQKPKPSQQA DFSAFPETSG LLTAARPISQ
301: SNPEDDCETS TSSLPGQSHA ENSLCNPTPT STLHAAGWQG LQSSEHKPSP DINICLHGEQ HQGTYL
101: LSPTSGSASP FSPASSDGKR GRGRPPGSGK RQLLEALGDW FAHSAGGSFT PHVVTIATGE DVAAKIHSFS QKGPRAICIL SANGVISNVT LRQPGSSGGT
201: LTYEGRFEIL SLSGSFTITE TGGIRSRTGG ISVSLAGPDG RVIGGGVTGL LLAASPIQVV VGSFMPNTFK EQKPKPSQQA DFSAFPETSG LLTAARPISQ
301: SNPEDDCETS TSSLPGQSHA ENSLCNPTPT STLHAAGWQG LQSSEHKPSP DINICLHGEQ HQGTYL
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.