CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052495_P001	Maize	cytosol, nucleus, peroxisome	88.95	91.22
Zm00001d004924_P001	Maize	cytosol	84.53	85.47
EES15662	Sorghum	cytosol, nucleus, peroxisome	83.43	84.83
Os11t0149100-01	Rice	cytosol, nucleus, peroxisome	79.01	78.14
TraesCS5B01G130400.1	Wheat	plastid	72.93	71.74
TraesCS5D01G138000.1	Wheat	plastid	72.65	71.66
TraesCS5A01G130500.1	Wheat	plastid	72.65	71.27
HORVU5Hr1G041290.4	Barley	cytosol, nucleus, peroxisome	72.93	70.78
TraesCS5B01G129200.1	Wheat	plastid	70.99	70.03
Os12t0147000-00	Rice	nucleus	72.93	69.29
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	38.95	41.96
GSMUA_Achr2P20250_001	Banana	cytosol, peroxisome, plastid	40.06	39.51
VIT_08s0007g04020.t01	Wine grape	nucleus	39.23	39.34
GSMUA_Achr6P13410_001	Banana	cytosol, nucleus, peroxisome	38.67	38.25
KRH20019	Soybean	nucleus	37.02	35.36
OQU82226	Sorghum	plastid	33.7	35.16
KXG25625	Sorghum	nucleus	34.53	33.51
OQU89696	Sorghum	nucleus	35.08	33.33
KRH32644	Soybean	plastid	35.08	32.07
KRH25156	Soybean	cytosol	22.38	31.15
PGSC0003DMT400007056	Potato	nucleus	34.53	30.79
KXG29351	Sorghum	plastid	31.77	30.67
Solyc09g008940.2.1	Tomato	nucleus	34.81	30.22
OQU76344	Sorghum	nucleus	30.11	30.11
KXG38867	Sorghum	plastid	34.81	29.79
KXG24283	Sorghum	plastid	31.77	29.26
OQU85994	Sorghum	nucleus	31.77	28.68
GSMUA_Achr3P03040_001	Banana	nucleus, peroxisome, plasma membrane	37.85	28.31
KRH30520	Soybean	nucleus	25.41	24.86
KXG27470	Sorghum	nucleus	27.35	23.68

Protein Annotations

EnsemblPlants:EES07975	EnsemblPlantsGene:SORBI_3005G035000	EntrezGene:8058533	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF24	PFAM:PF03479	PFscan:PS51742	ProteinID:EES07975	ProteinID:EES07975.1
RefSeq:XP_002448987.1	SEG:seg	SUPFAM:SSF117856	UniParc:UPI0001A8621B	UniProt:C5Y4L5	MapMan:35.1

Description

hypothetical protein

Coordinates

chr5:+:3133459..3136589

Molecular Weight (calculated)

36711.4 Da

IEP (calculated)

9.106

GRAVY (calculated)

-0.236

Length

362 amino acids

Sequence
(BLAST)

001: MQMEGGREGI AVAPGGGGHE SGGHGMFRAA AAAADIAMAE AQEEAAVKGY QSSPSTSPTP SPPPPAAAAA GHAGDAAATP LAWSLGGEEK PSGAAGDNNG
101: MQTAGQSGEH ASLSSGRRRG RPRGSGRRQI LATLGEWYAM SAGGSFTPHV IIVGTGEDVA ARIMSFSQKG PRSVCILSAN GTISNVTLRQ PDASGSTFTY
201: EGRFEILQLM GSFTMAEEGR RRTGGLSVSL AGPDGRVVGG VVAGMLRAAS PIQVIVGSFL PNSLKQHQRR MSMQQQPSPV SPALPALVAP PPVLTTATPI
301: SQAGPGNGFH APPPSATPPQ PHASAMNLNS TGFTMVGWPA SSPQPLAYRA SPDINVSLTP QE

Best Arabidopsis Sequence Match ( AT2G33620.1 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.