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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 1
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d052901_P002 Maize nucleus 84.99 85.91
Zm00001d031481_P001 Maize nucleus, peroxisome, plasma membrane, plastid 86.06 77.91
TraesCS7D01G247300.2 Wheat mitochondrion, nucleus, peroxisome, plastid 76.94 77.57
Os08t0512400-02 Rice nucleus 73.46 77.4
TraesCS7A01G248500.1 Wheat nucleus 76.14 76.76
HORVU7Hr1G051150.4 Barley nucleus 75.34 76.57
TraesCS7B01G143000.1 Wheat nucleus 73.46 75.9
OQU89696 Sorghum nucleus 66.49 65.09
GSMUA_Achr6P03420_001 Banana nucleus 59.79 61.94
CDX84679 Canola nucleus 43.43 61.83
Bra022946.1-P Field mustard nucleus 43.16 61.45
CDX79537 Canola mitochondrion, nucleus, plastid 43.16 61.45
GSMUA_Achr3P03710_001 Banana nucleus 58.45 59.73
VIT_18s0122g00700.t01 Wine grape nucleus 55.76 58.92
GSMUA_Achr9P12360_001 Banana extracellular, vacuole 59.52 54.55
AT2G33620.2 Thale cress nucleus 50.13 53.28
PGSC0003DMT400075370 Potato nucleus 50.67 52.79
Bra021865.1-P Field mustard nucleus 49.33 52.57
Solyc12g094710.1.1 Tomato nucleus 49.6 51.82
GSMUA_Achr5P23820_001 Banana cytosol, nucleus, plasma membrane 56.3 49.88
CDY37704 Canola nucleus 49.33 49.07
KRH51558 Soybean nucleus 45.84 48.17
KRH60876 Soybean nucleus 45.58 47.62
CDY23720 Canola extracellular, plasma membrane, vacuole 49.6 46.48
OQU82226 Sorghum plastid 42.36 45.53
OQU76344 Sorghum nucleus 43.16 44.48
KXG38867 Sorghum plastid 45.04 39.72
KXG24283 Sorghum plastid 36.73 34.86
EES07975 Sorghum cytosol 33.51 34.53
KXG29351 Sorghum plastid 34.32 34.13
EES15662 Sorghum cytosol, nucleus, peroxisome 32.44 33.99
OQU85994 Sorghum nucleus 35.39 32.92
Solyc12g019430.1.1 Tomato cytosol, plastid, vacuole 16.35 31.77
PGSC0003DMT400075372 Potato cytosol, nucleus, peroxisome 27.08 30.98
KXG27470 Sorghum nucleus 30.56 27.27
Protein Annotations
EnsemblPlants:KXG25625EnsemblPlantsGene:SORBI_3007G207900Gene3D:3.30.1330.80GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:AT_hook_DNA-bd_motifInterPro:IPR005175InterPro:PPC_domPANTHER:PTHR31500PANTHER:PTHR31500:SF13
PFAM:PF03479PFscan:PS51742ProteinID:KXG25625ProteinID:KXG25625.1ProteinID:KXG25626.1SEG:seg
SMART:SM00384SUPFAM:SSF117856UniParc:UPI00022071BCUniProt:A0A1B6PIV8MapMan:35.1:
Description
hypothetical protein
Coordinates
chr7:+:63721123..63724892
Molecular Weight (calculated)
37065.0 Da
IEP (calculated)
10.846
GRAVY (calculated)
-0.210
Length
373 amino acids
Sequence
(BLAST)
001: MEVRSEQGLM AGRDLFGMPK SPPAPVPGPP ASAAMQSVRM AYTADGTAVY APVSSSAATP SYQPQGPAHG TSMSAATVVG GNGASAVPGM GEPVAKKKRG
101: RPRKYGPDGS MALALVPASA ATGSPATGSP ATGQGSSGPF SPAGLNPASS LLVVSPDGFK KRGRPKGSTN KPRVDAAGSS GAGFTPHVIT VQAGEDVSSK
201: IMSFSQHGTR AICVLSANGA ISNVTLRQTA TSGGTVTYEG RFEILSLSGS FLLVENGGQR SRTGGLSVSL AGPDGRLLGG GVAGLLIAAS PVQIVLGSFN
301: SGGKKESKKH APSEPTSVPL KVAPTTGMGP NSPPSRGTLS ELSGGTGSPP PLHQGMAASN NNQPPFLSSM PWK
Best Arabidopsis Sequence Match ( AT2G33620.3 )
(BLAST)
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.