CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07975	Sorghum	cytosol	84.83	83.43
Os11t0149100-01	Rice	cytosol, nucleus, peroxisome	79.21	77.05
TraesCS5A01G130500.1	Wheat	plastid	75.0	72.36
HORVU5Hr1G041290.4	Barley	cytosol, nucleus, peroxisome	75.56	72.12
TraesCS5B01G130400.1	Wheat	plastid	74.44	72.01
TraesCS5D01G138000.1	Wheat	plastid	73.88	71.66
TraesCS5B01G129200.1	Wheat	plastid	72.47	70.3
Os12t0147000-00	Rice	nucleus	74.16	69.29
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	39.33	41.67
GSMUA_Achr2P20250_001	Banana	cytosol, peroxisome, plastid	40.73	39.51
VIT_08s0007g04020.t01	Wine grape	nucleus	39.61	39.06
GSMUA_Achr6P13410_001	Banana	cytosol, nucleus, peroxisome	39.04	37.98
KRH20019	Soybean	nucleus	36.24	34.04
OQU82226	Sorghum	plastid	32.87	33.72
OQU89696	Sorghum	nucleus	34.83	32.55
KXG25625	Sorghum	nucleus	33.99	32.44
KRH32644	Soybean	plastid	35.11	31.57
KRH25156	Soybean	cytosol	22.75	31.15
PGSC0003DMT400007056	Potato	nucleus	35.39	31.03
KXG29351	Sorghum	plastid	31.74	30.13
Solyc09g008940.2.1	Tomato	nucleus	35.11	29.98
OQU76344	Sorghum	nucleus	30.06	29.56
KXG24283	Sorghum	plastid	32.3	29.26
KXG38867	Sorghum	plastid	33.71	28.37
GSMUA_Achr3P03040_001	Banana	nucleus, peroxisome, plasma membrane	38.48	28.31
OQU85994	Sorghum	nucleus	30.62	27.18
KRH30520	Soybean	nucleus	26.12	25.14
KXG27470	Sorghum	nucleus	28.93	24.64

Protein Annotations

EnsemblPlants:EES15662	EnsemblPlantsGene:SORBI_3008G034200	EntrezGene:8066955	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF24	PFAM:PF03479	PFscan:PS51742	ProteinID:EES15662	ProteinID:EES15662.1
RefSeq:XP_002441824.1	SEG:seg	SUPFAM:SSF117856	UniParc:UPI0001A88569	UniProt:C5YRP3	MapMan:35.1

Description

hypothetical protein

Coordinates

chr8:+:3158946..3162301

Molecular Weight (calculated)

36560.3 Da

IEP (calculated)

9.629

GRAVY (calculated)

-0.269

Length

356 amino acids

Sequence
(BLAST)

001: MGGREGIAVA GGHESGHGLF RADISMTEAQ EAAAKGYQFS LSSPSTSPTP SPPPPAAAGD GGDATPVPLA WSLGGDKPSE ASGNNGVQTA AQTEHANLSS
101: GRRRGRPRGS GRRQILATLG EWYALTAGGS FTPHVIIVGT GEDVAARIMS FSKKGPRSVC ILSANGTISN VTLRQPDPSG STFTYEGLFE ILQLTGSFTM
201: AEEGRKRTGG LSVSLAGPDG RVVGGVVAGM LRAASPIQVI VGSFLPNSLK QHQRRMTLQQ QQQQPPAFPA PPAPPAPVAP PPVLTAAMPI SQAGFGNGFH
301: APPPSVVPPQ PHASTEHGAM NLNSTTGFTM VGWPASSPPM PHRASPDINV SLTPQE

Best Arabidopsis Sequence Match ( AT2G33620.1 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.