CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037425_P001	Maize	nucleus	86.74	87.96
VIT_18s0122g00700.t01	Wine grape	nucleus	48.9	50.14
CDX79537	Canola	mitochondrion, nucleus, plastid	36.19	50.0
CDX84679	Canola	nucleus	36.19	50.0
Os06t0326000-01	Rice	nucleus	51.93	49.74
Bra022946.1-P	Field mustard	nucleus	35.91	49.62
GSMUA_Achr3P03710_001	Banana	nucleus	48.34	47.95
GSMUA_Achr6P03420_001	Banana	nucleus	47.51	47.78
OQU89696	Sorghum	nucleus	48.9	46.46
GSMUA_Achr9P12360_001	Banana	extracellular, vacuole	49.45	43.98
PGSC0003DMT400075370	Potato	nucleus	43.37	43.85
Solyc12g094710.1.1	Tomato	nucleus	42.82	43.42
AT2G33620.2	Thale cress	nucleus	41.99	43.3
KXG25625	Sorghum	nucleus	44.48	43.16
Bra021865.1-P	Field mustard	nucleus	38.67	40.0
KRH60876	Soybean	nucleus	39.23	39.78
KRH51558	Soybean	nucleus	38.95	39.72
GSMUA_Achr5P23820_001	Banana	cytosol, nucleus, plasma membrane	45.3	38.95
TraesCS7B01G035400.1	Wheat	cytosol	21.27	38.5
CDY37704	Canola	nucleus	39.23	37.87
OQU82226	Sorghum	plastid	34.81	36.31
CDY23720	Canola	extracellular, plasma membrane, vacuole	39.78	36.18
TraesCS7A01G134300.1	Wheat	cytosol	19.61	36.04
KXG38867	Sorghum	plastid	39.5	33.81
TraesCS7D01G133700.1	Wheat	cytosol	20.72	32.61
KXG29351	Sorghum	plastid	33.7	32.53
HORVU7Hr1G027950.1	Barley	extracellular, mitochondrion, plasma membrane	21.27	32.49
TraesCS7D01G134100.1	Wheat	nucleus	31.22	31.22
TraesCS7B01G035900.1	Wheat	nucleus	30.39	30.3
KXG24283	Sorghum	plastid	32.87	30.28
EES07975	Sorghum	cytosol	30.11	30.11
EES15662	Sorghum	cytosol, nucleus, peroxisome	29.56	30.06
PGSC0003DMT400075372	Potato	cytosol, nucleus, peroxisome	26.24	29.14
Solyc12g019430.1.1	Tomato	cytosol, plastid, vacuole	15.19	28.65
OQU85994	Sorghum	nucleus	31.49	28.43
HORVU7Hr1G028110.15	Barley	plasma membrane	29.01	28.3
KXG27470	Sorghum	nucleus	29.28	25.36

Protein Annotations

EnsemblPlants:OQU76344	EnsemblPlantsGene:SORBI_3010G133500	EntrezGene:8072904	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF42	PFAM:PF03479	PFscan:PS51742	ProteinID:OQU76344	ProteinID:OQU76344.1
SEG:seg	SUPFAM:SSF117856	UniParc:UPI0009DC874A	UniProt:A0A1W0VSW5	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr10:-:19429273..19433640

Molecular Weight (calculated)

36103.3 Da

IEP (calculated)

10.251

GRAVY (calculated)

-0.239

Length

362 amino acids

Sequence
(BLAST)

001: MSSAMAAASE AAYGGGVQKG SLQQHQAPQP SPGSVFYTPD GIAVYAKPAI PPFYQQSAGS NAIVPAAPGL AHSSATSEPF KRKRGRPRKY GPADGAVPLA
101: IVPPSQPPTA AAPAASEASP TIPPGFAPSP QGGGVVSPQA SPAPQPPAAS GAPAVKKRGR PPGPSSKKQQ PQAAAPAGPG WAGWKPHIFT VQAGEDVASR
201: VMSFSGNGWA VCILTANGAV SNVTLRQGES SGGTVTYEGR FEILSLAGSY LLSESAGMSS RTGGLSVSLA GPDGRVLGGA VAGPLTAASP VQVVIGSFLA
301: DTKMELDPGS APEKHAFGRF PTASSPSRGT ESLGGHASPP NTTGSFSTST QPPGFPSFPP WK

Best Arabidopsis Sequence Match ( AT2G33620.1 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.