Factsheet for GSMUA_Achr3P03710_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P12360_001	Banana	extracellular, vacuole	82.19	73.71
GSMUA_Achr6P03420_001	Banana	nucleus	70.96	71.94
VIT_18s0122g00700.t01	Wine grape	nucleus	65.75	67.99
GSMUA_Achr7P20540_001	Banana	nucleus	49.59	61.77
CDX79537	Canola	mitochondrion, nucleus, plastid	43.29	60.31
CDX84679	Canola	nucleus	43.29	60.31
Bra022946.1-P	Field mustard	nucleus	43.01	59.92
Os09t0491708-01	Rice	nucleus	58.63	59.61
Os08t0512400-02	Rice	nucleus	57.53	59.32
PGSC0003DMT400075370	Potato	nucleus	57.53	58.66
KXG25625	Sorghum	nucleus	59.73	58.45
GSMUA_Achr5P23820_001	Banana	cytosol, nucleus, plasma membrane	67.12	58.19
Solyc12g094710.1.1	Tomato	nucleus	55.89	57.14
GSMUA_Achr5P03370_001	Banana	mitochondrion, plastid	29.32	56.32
OQU89696	Sorghum	nucleus	58.63	56.17
Zm00001d052901_P002	Maize	nucleus	56.44	55.83
AT2G33620.2	Thale cress	nucleus	52.6	54.7
TraesCS7A01G248500.1	Wheat	nucleus	54.79	54.05
TraesCS7D01G247300.2	Wheat	mitochondrion, nucleus, peroxisome, plastid	54.52	53.78
HORVU7Hr1G051150.4	Barley	nucleus	53.97	53.68
TraesCS7B01G143000.1	Wheat	nucleus	52.88	53.46
Bra021865.1-P	Field mustard	nucleus	50.68	52.86
Zm00001d031481_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	58.36	51.7
GSMUA_Achr4P27240_001	Banana	cytosol, extracellular, nucleus, plastid	49.59	51.42
Zm00001d006034_P003	Maize	nucleus	58.36	49.53
CDY37704	Canola	nucleus	50.68	49.33
Zm00001d037425_P001	Maize	nucleus	47.4	48.46
OQU76344	Sorghum	nucleus	47.95	48.34
HORVU5Hr1G073550.1	Barley	nucleus, peroxisome, plastid	51.23	47.7
Os06t0326000-01	Rice	nucleus	48.77	47.09
CDY23720	Canola	extracellular, plasma membrane, vacuole	51.23	46.98
GSMUA_Achr2P09840_001	Banana	nucleus	45.75	46.78
KRH51558	Soybean	nucleus	45.48	46.76
KRH60876	Soybean	nucleus	45.48	46.5
GSMUA_Achr1P03070_001	Banana	cytosol, extracellular, nucleus	24.66	45.92
GSMUA_Achr5P20630_001	Banana	nucleus, plasma membrane, plastid	41.1	45.05
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	41.37	44.94
GSMUA_Achr6P13410_001	Banana	cytosol, nucleus, peroxisome	42.47	42.35
GSMUA_Achr2P20250_001	Banana	cytosol, peroxisome, plastid	41.64	41.42
GSMUA_Achr8P11400_001	Banana	nucleus	38.9	41.04
GSMUA_Achr7P06500_001	Banana	cytosol, plasma membrane, plastid	36.99	40.18
GSMUA_Achr11P...	Banana	nucleus	40.82	40.16
GSMUA_Achr11P...	Banana	nucleus	40.0	38.93
GSMUA_Achr1P19840_001	Banana	nucleus	39.45	37.8
GSMUA_Achr4P30000_001	Banana	nucleus	33.15	37.12
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	38.36	36.65
Solyc12g019430.1.1	Tomato	cytosol, plastid, vacuole	19.18	36.46
TraesCS7A01G134300.1	Wheat	cytosol	19.45	36.04
GSMUA_Achr2P03170_001	Banana	cytosol, peroxisome, plasma membrane	36.99	34.62
TraesCS7B01G035400.1	Wheat	cytosol	18.9	34.5
PGSC0003DMT400075372	Potato	cytosol, nucleus, peroxisome	29.59	33.13
HORVU7Hr1G027950.1	Barley	extracellular, mitochondrion, plasma membrane	20.82	32.07
TraesCS7D01G133700.1	Wheat	cytosol	19.73	31.3
TraesCS7D01G134100.1	Wheat	nucleus	30.68	30.94
TraesCS7B01G035900.1	Wheat	nucleus	30.14	30.3
GSMUA_Achr3P03040_001	Banana	nucleus, peroxisome, plasma membrane	40.0	30.17
HORVU7Hr1G028110.15	Barley	plasma membrane	29.04	28.57

Protein Annotations

EnsemblPlants:GSMUA_Achr3P03710_001	EnsemblPlants:GSMUA_Achr3T03710_001	EnsemblPlantsGene:GSMUA_Achr3G03710_001	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF0	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI000296DD97	UniProt:M0SBI9	MapMan:35.1	:	:	:

Description

AT hook motif domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G03710_001]

Coordinates

chr3:+:2413994..2418825

Molecular Weight (calculated)

36975.7 Da

IEP (calculated)

10.574

GRAVY (calculated)

-0.358

Length

365 amino acids

Sequence
(BLAST)

001: MEVRSETGIM SAREPFDVAM QKSSTQNQPA IQSMRLAYTQ DGTAIYKPVT SNSPSSPPST SPTTLSYQGG GRGGGSTGSG VEGPSPVMAS HGLNINIGEP
101: VKRKRGRPRK YGPDGIVALA PTSAAASVPP GASGCSPLFP GTTKPVSWAD PTKKARGRPS GSGKKQQMAA LGSAGIGFTP HVITVKTGED VSSKIMSFCQ
201: HGPRAVCILS ANGAISNVTL RQTATSGGTV TYEGRFEILS LSGSFLLSES GGQRSRTGGL SVSLAGTDGR VLGGGVAGLL TAASPVQVIV GSFIADGRKE
301: TKKTNPLEPM SAPGKLVPAG TSGPSSPPSR GTLSESSGGP GSPLNQSTGT YNNSDQQGLS NMPWK

Best Arabidopsis Sequence Match ( AT2G33620.3 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.