Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G035400.1 | Wheat | cytosol | 87.31 | 86.0 |
| TraesCS7D01G133700.1 | Wheat | cytosol | 90.86 | 77.83 |
| HORVU7Hr1G027950.1 | Barley | extracellular, mitochondrion, plasma membrane | 80.2 | 66.67 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 36.04 | 20.11 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 26.4 | 19.85 |
| CDX84679 | Canola | nucleus | 26.4 | 19.85 |
| PGSC0003DMT400075370 | Potato | nucleus | 36.04 | 19.83 |
| OQU76344 | Sorghum | nucleus | 36.04 | 19.61 |
| Zm00001d037425_P001 | Maize | nucleus | 35.53 | 19.61 |
| Os06t0326000-01 | Rice | nucleus | 37.56 | 19.58 |
| Bra022946.1-P | Field mustard | nucleus | 25.89 | 19.47 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 36.04 | 19.45 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 35.03 | 19.17 |
| Solyc12g094710.1.1 | Tomato | nucleus | 34.52 | 19.05 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 29.44 | 18.89 |
| AT2G33620.2 | Thale cress | nucleus | 31.47 | 17.66 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 28.93 | 17.48 |
| TraesCS7A01G315100.1 | Wheat | plastid | 35.03 | 17.34 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 34.52 | 16.71 |
| TraesCS7A01G248500.1 | Wheat | nucleus | 30.96 | 16.49 |
| Bra021865.1-P | Field mustard | nucleus | 28.93 | 16.29 |
| TraesCS5A01G130500.1 | Wheat | plastid | 30.46 | 16.26 |
| KRH60876 | Soybean | nucleus | 29.44 | 16.25 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 34.52 | 16.15 |
| KRH51558 | Soybean | nucleus | 28.93 | 16.06 |
| TraesCS5A01G267000.1 | Wheat | nucleus, peroxisome, vacuole | 31.47 | 15.62 |
| TraesCS6A01G083100.1 | Wheat | cytosol, nucleus, peroxisome | 30.96 | 15.4 |
| CDY37704 | Canola | nucleus | 28.43 | 14.93 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 29.95 | 14.82 |
| TraesCS2A01G449500.1 | Wheat | plastid | 30.46 | 14.63 |
| TraesCS1A01G190900.1 | Wheat | nucleus | 30.96 | 13.44 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 12.69 | 13.02 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 25.38 | 12.38 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 30.46 | 11.3 |
| TraesCS5A01G266900.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G134300.1 | EnsemblPlantsGene:TraesCS7A01G134300 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PFAM:PF03479 |
| PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7A:-:85964986..85967344
Molecular Weight (calculated)
19777.4 Da
IEP (calculated)
4.604
GRAVY (calculated)
-0.040
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGGAIPAG AGKAAYGDGM HKSPLHPQPQ PTVDARLADA EQEPCGTVIV PQIIIVKGGQ DVAMEVKSYG GNGWAVFIMS AEGAVSNVTL HQPASPLETV
101: MHKGCFDIVS MTGSYLPSKT DGVSSLKGGF AISLVGADGR IFGGGLAGPL IAASSVQVII GRFAADEKED IKQDVASGTE PSDSPNGSSS GPGSPSN
101: MHKGCFDIVS MTGSYLPSKT DGVSSLKGGF AISLVGADGR IFGGGLAGPL IAASSVQVII GRFAADEKED IKQDVASGTE PSDSPNGSSS GPGSPSN
001: MEEREGTNIN NIPTSFGLKQ HETPLPPPGY PPRSENPNLF PVGQSSTSSA AAAVKPSENV APPFSLTMPV ENSSSELKKK RGRPRKYNPD GSLAVTLSPM
101: PISSSVPLTS EFGSRKRGRG RGRGRGRGRG RGQGQGSREP NNNNNDNNWL KNPQMFEFNN NTPTSGGGGP AEIVSPSFTP HVLTVNAGED VTMKIMTFSQ
201: QGSRAICILS ANGPISNVTL RQSMTSGGTL TYEGHFEILS LTGSFIPSES GGTRSRAGGM SVSLAGQDGR VFGGGLAGLF IAAGPVQVMV GSFIAGQEES
301: QQQQQQIKKQ RRERLGIPTT TQASNISFGG SAEDPKARYG LNKPVVIQPP PVSAPPVSFS HEPSTNTVHG YYANNTANHI KDLFSSLPGE DREEDEDDLE
401: GEDDEEFGGH SESDTEVPS
101: PISSSVPLTS EFGSRKRGRG RGRGRGRGRG RGQGQGSREP NNNNNDNNWL KNPQMFEFNN NTPTSGGGGP AEIVSPSFTP HVLTVNAGED VTMKIMTFSQ
201: QGSRAICILS ANGPISNVTL RQSMTSGGTL TYEGHFEILS LTGSFIPSES GGTRSRAGGM SVSLAGQDGR VFGGGLAGLF IAAGPVQVMV GSFIAGQEES
301: QQQQQQIKKQ RRERLGIPTT TQASNISFGG SAEDPKARYG LNKPVVIQPP PVSAPPVSFS HEPSTNTVHG YYANNTANHI KDLFSSLPGE DREEDEDDLE
401: GEDDEEFGGH SESDTEVPS
Arabidopsis Description
AHL4AT-hook motif nuclear-localized protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.