Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021865.1-P | Field mustard | nucleus | 90.67 | 97.14 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 91.47 | 86.18 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 57.6 | 82.44 |
| CDX84679 | Canola | nucleus | 57.33 | 82.06 |
| AT2G33620.2 | Thale cress | nucleus | 68.8 | 73.5 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 53.6 | 56.94 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 48.8 | 50.83 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 49.33 | 50.68 |
| Os08t0512400-02 | Rice | nucleus | 47.73 | 50.56 |
| KXG25625 | Sorghum | nucleus | 49.07 | 49.33 |
| Os09t0491708-01 | Rice | nucleus | 46.93 | 49.03 |
| GSMUA_Achr7P20540_001 | Banana | nucleus | 37.6 | 48.12 |
| PGSC0003DMT400075370 | Potato | nucleus | 45.33 | 47.49 |
| TraesCS7A01G248500.1 | Wheat | nucleus | 46.4 | 47.03 |
| HORVU7Hr1G051150.4 | Barley | nucleus | 45.87 | 46.87 |
| TraesCS7D01G247300.2 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 46.13 | 46.76 |
| TraesCS7B01G143000.1 | Wheat | nucleus | 44.8 | 46.54 |
| Solyc12g094710.1.1 | Tomato | nucleus | 44.0 | 46.22 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 50.13 | 46.19 |
| OQU89696 | Sorghum | nucleus | 45.87 | 45.14 |
| Zm00001d052901_P002 | Maize | nucleus | 44.27 | 44.99 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 48.8 | 43.47 |
| Zm00001d031481_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 47.73 | 43.45 |
| HORVU5Hr1G073550.1 | Barley | nucleus, peroxisome, plastid | 42.13 | 40.31 |
| Zm00001d037425_P001 | Maize | nucleus | 37.87 | 39.78 |
| KRH51558 | Soybean | nucleus | 37.6 | 39.72 |
| OQU76344 | Sorghum | nucleus | 37.87 | 39.23 |
| KRH60876 | Soybean | nucleus | 37.07 | 38.94 |
| Zm00001d006034_P003 | Maize | nucleus | 44.53 | 38.84 |
| Os06t0326000-01 | Rice | nucleus | 38.67 | 38.36 |
| CDY07239 | Canola | plasma membrane | 22.93 | 37.23 |
| CDY01503 | Canola | cytosol | 25.33 | 36.68 |
| CDY47428 | Canola | nucleus | 29.07 | 35.28 |
| CDY04392 | Canola | nucleus | 25.07 | 35.07 |
| CDY41291 | Canola | nucleus | 27.47 | 33.77 |
| CDY07238 | Canola | nucleus | 27.73 | 32.91 |
| CDX82971 | Canola | plastid | 18.67 | 32.56 |
| CDY41028 | Canola | nucleus, plastid | 21.07 | 31.85 |
| CDY03203 | Canola | nucleus | 30.4 | 31.84 |
| CDY35172 | Canola | nucleus | 29.87 | 31.73 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 27.73 | 31.61 |
| CDX98767 | Canola | nucleus | 27.73 | 31.61 |
| CDY41027 | Canola | cytosol | 22.4 | 31.58 |
| CDX78814 | Canola | nucleus | 34.13 | 31.45 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 30.13 | 31.22 |
| CDY26694 | Canola | cytosol, plastid | 21.33 | 30.53 |
| CDY45364 | Canola | nucleus | 29.87 | 30.52 |
| CDY44500 | Canola | nucleus | 33.87 | 30.24 |
| CDY26693 | Canola | plastid | 21.6 | 30.0 |
| CDY25500 | Canola | nucleus | 29.33 | 29.73 |
| CDY48928 | Canola | nucleus | 27.2 | 29.65 |
| CDX71746 | Canola | nucleus | 27.2 | 29.65 |
| CDX89109 | Canola | nucleus | 26.4 | 29.55 |
| CDY37070 | Canola | nucleus | 26.67 | 29.33 |
| CDY42495 | Canola | nucleus | 26.4 | 29.29 |
| CDY58791 | Canola | nucleus | 25.6 | 29.27 |
| CDY27354 | Canola | nucleus | 27.2 | 29.23 |
| CDY08882 | Canola | nucleus | 33.87 | 29.2 |
| TraesCS7B01G035400.1 | Wheat | cytosol | 15.47 | 29.0 |
| CDX76549 | Canola | nucleus | 33.87 | 28.86 |
| CDY26692 | Canola | nucleus | 23.2 | 28.71 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 14.67 | 28.65 |
| CDY34355 | Canola | nucleus | 28.8 | 28.57 |
| TraesCS7A01G134300.1 | Wheat | cytosol | 14.93 | 28.43 |
| CDY38874 | Canola | nucleus | 32.0 | 28.37 |
| CDY51561 | Canola | nucleus | 25.6 | 28.24 |
| CDX94457 | Canola | nucleus | 28.27 | 28.04 |
| CDX92693 | Canola | nucleus | 29.6 | 28.03 |
| CDY68252 | Canola | nucleus | 22.13 | 27.95 |
| CDY65097 | Canola | nucleus | 31.2 | 27.92 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 24.27 | 27.91 |
| CDY01506 | Canola | nucleus | 22.4 | 27.91 |
| HORVU7Hr1G027950.1 | Barley | extracellular, mitochondrion, plasma membrane | 17.6 | 27.85 |
| CDY32624 | Canola | nucleus | 31.47 | 27.83 |
| CDY49703 | Canola | nucleus | 29.6 | 27.82 |
| CDX89422 | Canola | nucleus | 28.27 | 27.6 |
| CDY00488 | Canola | nucleus | 31.47 | 27.51 |
| CDX91598 | Canola | nucleus | 30.67 | 27.45 |
| CDY26691 | Canola | cytosol, plastid | 22.13 | 26.69 |
| CDY16785 | Canola | nucleus | 27.73 | 26.53 |
| CDX99902 | Canola | nucleus | 30.93 | 26.42 |
| CDX86910 | Canola | nucleus | 28.0 | 26.32 |
| CDX87241 | Canola | nucleus | 27.2 | 26.09 |
| CDY00271 | Canola | nucleus | 28.0 | 26.05 |
| TraesCS7D01G134100.1 | Wheat | nucleus | 24.8 | 25.69 |
| TraesCS7D01G133700.1 | Wheat | cytosol | 15.73 | 25.65 |
| TraesCS7B01G035900.1 | Wheat | nucleus | 24.53 | 25.34 |
| CDY30710 | Canola | nucleus | 26.67 | 24.94 |
| CDY39751 | Canola | nucleus | 24.53 | 24.08 |
| CDY46385 | Canola | nucleus | 24.53 | 24.08 |
| CDY52506 | Canola | nucleus | 22.4 | 24.07 |
| CDY65362 | Canola | nucleus | 23.73 | 23.92 |
| CDY52477 | Canola | nucleus | 23.47 | 23.91 |
| CDY05594 | Canola | nucleus | 22.67 | 23.88 |
| HORVU7Hr1G028110.15 | Barley | plasma membrane | 23.47 | 23.72 |
| CDY21122 | Canola | nucleus | 24.27 | 23.58 |
| CDY30005 | Canola | nucleus | 23.47 | 23.1 |
| CDY13231 | Canola | nucleus | 22.67 | 20.73 |
Protein Annotations
| EnsemblPlants:CDY37704 | EnsemblPlantsGene:GSBRNA2T00064603001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF0 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY37704 | ProteinID:CDY37704.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EE4270 | UniProt:A0A078HK73 | MapMan:35.1 | : | : |
Description
BnaA04g19640DBnaA04g19640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK73]
Coordinates
chrLK032406:-:155515..158361
Molecular Weight (calculated)
39257.3 Da
IEP (calculated)
9.413
GRAVY (calculated)
-0.484
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKSLMDEWQ GIFFASFPEF PQLSDGTMSG SETGLTAANR EPMPFTMSLH HQQHNQPPPP PQPQQNSQNM QLSFTGADKT AVYKPMSSDS SPQQQYQHNS
101: ETGLNMNVPV MGGEQRVKKR RGRPRKYEPG SGEASLGFVP GPPSYTVSQP SGGDGGGGGA SPTVKRMRGR PSGSSNRPKL QALGSTGVGF TPHVLTVNTG
201: EDVSSKIMAF SQNGPRAVCV LSANGAISNV TLRQAATSGG TVTYEGRFEI LSLSGSFLLL ENNGHRSRTG GLSVSLSAPD GNVLGGCVAG LLIAATPVQI
301: VVGSFIPDGQ KEHVGQMELA SPALPRVAPS HVLTTPNSQQ ARGGMSESSC GGHGSPLQQT AGGPYNNNNL SMPWK
101: ETGLNMNVPV MGGEQRVKKR RGRPRKYEPG SGEASLGFVP GPPSYTVSQP SGGDGGGGGA SPTVKRMRGR PSGSSNRPKL QALGSTGVGF TPHVLTVNTG
201: EDVSSKIMAF SQNGPRAVCV LSANGAISNV TLRQAATSGG TVTYEGRFEI LSLSGSFLLL ENNGHRSRTG GLSVSLSAPD GNVLGGCVAG LLIAATPVQI
301: VVGSFIPDGQ KEHVGQMELA SPALPRVAPS HVLTTPNSQQ ARGGMSESSC GGHGSPLQQT AGGPYNNNNL SMPWK
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.