Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26691 | Canola | cytosol, plastid | 86.87 | 82.96 |
| CDY26692 | Canola | nucleus | 71.72 | 70.3 |
| CDY41027 | Canola | cytosol | 62.29 | 69.55 |
| CDY41028 | Canola | nucleus, plastid | 57.24 | 68.55 |
| CDY26693 | Canola | plastid | 61.62 | 67.78 |
| CDY26694 | Canola | cytosol, plastid | 59.26 | 67.18 |
| CDY01506 | Canola | nucleus | 50.84 | 50.17 |
| CDY01503 | Canola | cytosol | 42.09 | 48.26 |
| CDX78814 | Canola | nucleus | 57.91 | 42.26 |
| CDY44500 | Canola | nucleus | 58.25 | 41.19 |
| CDY08882 | Canola | nucleus | 58.92 | 40.23 |
| CDX76549 | Canola | nucleus | 59.26 | 40.0 |
| AT4G17950.1 | Thale cress | nucleus | 58.25 | 39.41 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 22.9 | 35.79 |
| Os10t0572900-02 | Rice | nucleus | 28.62 | 33.86 |
| CDY03203 | Canola | nucleus | 40.74 | 33.8 |
| CDY35172 | Canola | nucleus | 39.73 | 33.43 |
| Solyc04g053090.1.1 | Tomato | plastid | 18.18 | 31.95 |
| CDX84679 | Canola | nucleus | 27.27 | 30.92 |
| VIT_02s0012g00900.t01 | Wine grape | nucleus | 36.7 | 30.88 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 26.94 | 30.53 |
| Solyc04g053100.1.1 | Tomato | plastid | 16.84 | 30.12 |
| HORVU7Hr1G065300.2 | Barley | mitochondrion, plastid | 18.86 | 29.63 |
| KRH58200 | Soybean | nucleus | 35.69 | 29.28 |
| CDY07239 | Canola | plasma membrane | 22.56 | 29.0 |
| HORVU2Hr1G105800.13 | Barley | cytosol, vacuole | 29.97 | 28.99 |
| KRH04337 | Soybean | nucleus | 34.68 | 28.93 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 32.32 | 27.27 |
| Os04t0589900-01 | Rice | nucleus | 34.68 | 27.18 |
| OQU82226 | Sorghum | plastid | 31.31 | 26.8 |
| PGSC0003DMT400052826 | Potato | nucleus | 32.32 | 26.67 |
| KRH28286 | Soybean | plastid | 29.63 | 25.96 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 30.98 | 25.77 |
| KRH77206 | Soybean | nucleus | 29.29 | 25.74 |
| CDY42495 | Canola | nucleus | 28.62 | 25.15 |
| CDX71746 | Canola | nucleus | 28.62 | 24.71 |
| Zm00001d026036_P001 | Maize | nucleus | 33.33 | 24.63 |
| CDY48928 | Canola | nucleus | 28.28 | 24.42 |
| TraesCS2A01G449500.1 | Wheat | plastid | 33.67 | 24.39 |
| CDY58791 | Canola | nucleus | 26.94 | 24.39 |
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 33.67 | 24.27 |
| CDX89109 | Canola | nucleus | 27.27 | 24.18 |
| CDY51561 | Canola | nucleus | 27.61 | 24.12 |
| CDY07238 | Canola | nucleus | 25.59 | 24.05 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 33.33 | 24.03 |
| Zm00001d047042_P004 | Maize | cytosol, nucleus, plasma membrane | 33.67 | 23.31 |
| CDY27354 | Canola | nucleus | 27.27 | 23.21 |
| CDY37070 | Canola | nucleus | 26.6 | 23.17 |
| Zm00001d030053_P003 | Maize | plastid | 32.32 | 23.02 |
| CDY47428 | Canola | nucleus | 23.91 | 22.98 |
| KXG38867 | Sorghum | plastid | 31.99 | 22.46 |
| CDY52506 | Canola | nucleus | 26.26 | 22.35 |
| CDY05594 | Canola | nucleus | 26.6 | 22.19 |
| CDY37704 | Canola | nucleus | 27.95 | 22.13 |
| CDY65362 | Canola | nucleus | 27.61 | 22.04 |
| CDY52477 | Canola | nucleus | 27.27 | 22.01 |
| Solyc08g006950.2.1 | Tomato | nucleus | 28.62 | 21.74 |
| CDY04392 | Canola | nucleus | 19.53 | 21.64 |
| CDY41291 | Canola | nucleus | 22.22 | 21.64 |
| CDX98767 | Canola | nucleus | 23.91 | 21.58 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 23.91 | 21.58 |
| CDY21122 | Canola | nucleus | 27.95 | 21.5 |
| CDY30005 | Canola | nucleus | 27.27 | 21.26 |
| TraesCS1B01G206100.2 | Wheat | nucleus | 31.65 | 20.84 |
| TraesCS1D01G194900.2 | Wheat | nucleus | 31.65 | 20.7 |
| TraesCS1A01G190900.1 | Wheat | nucleus | 31.65 | 20.7 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 27.61 | 20.6 |
| HORVU1Hr1G049980.12 | Barley | nucleus | 31.65 | 20.26 |
| CDX94457 | Canola | nucleus | 25.25 | 19.84 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 23.91 | 19.61 |
| CDX89422 | Canola | nucleus | 25.25 | 19.53 |
| CDY25500 | Canola | nucleus | 24.24 | 19.46 |
| CDX92693 | Canola | nucleus | 25.59 | 19.19 |
| CDX87241 | Canola | nucleus | 25.25 | 19.18 |
| CDY16785 | Canola | nucleus | 25.25 | 19.13 |
| CDX82971 | Canola | plastid | 13.8 | 19.07 |
| CDY49703 | Canola | nucleus | 25.59 | 19.05 |
| CDY34355 | Canola | nucleus | 24.24 | 19.05 |
| CDY00271 | Canola | nucleus | 25.59 | 18.86 |
| CDY45364 | Canola | nucleus | 23.23 | 18.8 |
| CDX86910 | Canola | nucleus | 25.25 | 18.8 |
| CDY30710 | Canola | nucleus | 25.25 | 18.7 |
| CDY13231 | Canola | nucleus | 25.59 | 18.54 |
| CDY46385 | Canola | nucleus | 22.9 | 17.8 |
| CDY39751 | Canola | nucleus | 22.9 | 17.8 |
| CDY38874 | Canola | nucleus | 25.25 | 17.73 |
| CDY65097 | Canola | nucleus | 24.92 | 17.66 |
| CDX91598 | Canola | nucleus | 24.92 | 17.66 |
| CDY00488 | Canola | nucleus | 25.25 | 17.48 |
| CDY32624 | Canola | nucleus | 24.58 | 17.22 |
| CDX99902 | Canola | nucleus | 25.25 | 17.08 |
Protein Annotations
| EnsemblPlants:CDY68252 | EnsemblPlantsGene:GSBRNA2T00072101001 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PFAM:PF03479 |
| PFscan:PS51742 | ProteinID:CDY68252 | ProteinID:CDY68252.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0004EF111D |
| UniProt:A0A078JS65 | MapMan:35.1 | : | : | : | : |
Description
BnaAnng26620DBnaAnng26620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JS65]
Coordinates
chrLK037054:+:4075..5302
Molecular Weight (calculated)
30972.4 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.394
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPKEIHQQQ QQQNRNAAAA YAGPTSTSQA MHHGLSDGAL SLREPQPQQA VMLDGSPYSV SIVAERRWRQ LGIEQRDAPD VGGGANAGPP AKRKGRPLGS
101: RDKQPRKASG GGGGPLTAHV IDVNSGEDIA IKLVEFMNQE PREVCILSAS GVVSIAVLQS DSPLGFVKYE GLYVITDMSG TFWNTESDDG ATVTRTGNLR
201: VTLAGPDCKV VWGCVGGMLV AGSQVQVIVG TFIREGVKLS AASAPANALS LTGGSGPGLP QSQGPSESSE ENASKSLGNS TPQPPHHLPL WPGNNPQ
101: RDKQPRKASG GGGGPLTAHV IDVNSGEDIA IKLVEFMNQE PREVCILSAS GVVSIAVLQS DSPLGFVKYE GLYVITDMSG TFWNTESDDG ATVTRTGNLR
201: VTLAGPDCKV VWGCVGGMLV AGSQVQVIVG TFIREGVKLS AASAPANALS LTGGSGPGLP QSQGPSESSE ENASKSLGNS TPQPPHHLPL WPGNNPQ
001: MDSREIHHQQ QQQQQQQQQQ QQQQQHLQQQ QQPPPGMLMS HHNSYNRNPN AAAAVLMGHN TSTSQAMHQR LPFGGSMSPH QPQQHQYHHP QPQQQIDQKT
101: LESLGFDGSP SSVAATQQHS MRFGIDHQQV KKKRGRPRKY AADGGGGGGG GSNIALGLAP TSPLPSASNS YGGGNEGGGG GDSAGANANS SDPPAKRNRG
201: RPPGSGKKQL DALGGTGGVG FTPHVIEVKT GEDIATKILA FTNQGPRAIC ILSATGAVTN VMLRQANNSN PTGTVKYEGR FEIISLSGSF LNSESNGTVT
301: KTGNLSVSLA GHEGRIVGGC VDGMLVAGSQ VQVIVGSFVP DGRKQKQSAG RAQNTPEPAS APANMLSFGG VGGPGSPRSQ GQQHSSESSE ENESNSPLHR
401: RSNNNNSNNH GIFGNSTPQP LHQIPMQMYQ NLWPGNSPQ
101: LESLGFDGSP SSVAATQQHS MRFGIDHQQV KKKRGRPRKY AADGGGGGGG GSNIALGLAP TSPLPSASNS YGGGNEGGGG GDSAGANANS SDPPAKRNRG
201: RPPGSGKKQL DALGGTGGVG FTPHVIEVKT GEDIATKILA FTNQGPRAIC ILSATGAVTN VMLRQANNSN PTGTVKYEGR FEIISLSGSF LNSESNGTVT
301: KTGNLSVSLA GHEGRIVGGC VDGMLVAGSQ VQVIVGSFVP DGRKQKQSAG RAQNTPEPAS APANMLSFGG VGGPGSPRSQ GQQHSSESSE ENESNSPLHR
401: RSNNNNSNNH GIFGNSTPQP LHQIPMQMYQ NLWPGNSPQ
Arabidopsis Description
AHL13AT-hook motif nuclear-localized protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q940I0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.