Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027642.1-P | Field mustard | nucleus | 94.59 | 91.86 |
| CDY34355 | Canola | nucleus | 93.51 | 91.53 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 83.24 | 85.08 |
| CDY45364 | Canola | nucleus | 83.78 | 84.47 |
| AT1G63470.1 | Thale cress | nucleus | 84.59 | 82.8 |
| CDY39751 | Canola | nucleus | 62.97 | 60.99 |
| CDY46385 | Canola | nucleus | 62.43 | 60.47 |
| KRH05193 | Soybean | plastid | 22.97 | 57.82 |
| VIT_02s0025g03580.t01 | Wine grape | nucleus | 50.81 | 54.34 |
| KRH27929 | Soybean | nucleus | 50.27 | 52.84 |
| KRH77536 | Soybean | nucleus | 49.46 | 51.26 |
| KRH59866 | Soybean | nucleus | 48.65 | 51.14 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 45.14 | 50.15 |
| KRH41165 | Soybean | nucleus | 47.57 | 50.0 |
| Solyc08g080960.2.1 | Tomato | nucleus | 42.97 | 47.6 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 43.24 | 46.24 |
| Solyc08g008030.2.1 | Tomato | nucleus | 42.43 | 45.38 |
| PGSC0003DMT400014926 | Potato | plastid | 42.16 | 45.22 |
| GSMUA_Achr11P... | Banana | nucleus | 44.86 | 44.27 |
| GSMUA_Achr11P... | Banana | nucleus | 44.32 | 44.2 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 23.24 | 43.88 |
| CDY42495 | Canola | nucleus | 40.0 | 43.79 |
| CDY48928 | Canola | nucleus | 40.27 | 43.31 |
| CDX89109 | Canola | nucleus | 39.19 | 43.28 |
| CDY37070 | Canola | nucleus | 39.73 | 43.11 |
| CDX71746 | Canola | nucleus | 39.73 | 42.73 |
| PGSC0003DMT400031843 | Potato | plastid | 43.51 | 41.93 |
| CDY27354 | Canola | nucleus | 39.46 | 41.83 |
| CDY58791 | Canola | nucleus | 36.76 | 41.46 |
| CDX84679 | Canola | nucleus | 29.19 | 41.22 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 28.92 | 40.84 |
| CDY51561 | Canola | nucleus | 37.3 | 40.59 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 34.59 | 39.26 |
| HORVU2Hr1G123730.3 | Barley | plastid | 20.81 | 36.67 |
| Os02t0824300-01 | Rice | nucleus | 38.92 | 36.55 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 29.73 | 35.83 |
| Zm00001d018515_P002 | Maize | nucleus | 37.3 | 35.57 |
| CDY07239 | Canola | plasma membrane | 22.16 | 35.5 |
| CDY04392 | Canola | nucleus | 25.41 | 35.07 |
| OQU85994 | Sorghum | nucleus | 37.3 | 34.41 |
| CDY07238 | Canola | nucleus | 28.92 | 33.86 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 36.49 | 33.75 |
| CDY47428 | Canola | nucleus | 28.11 | 33.66 |
| CDX82971 | Canola | plastid | 19.19 | 33.02 |
| CDY41291 | Canola | nucleus | 27.03 | 32.79 |
| CDX98767 | Canola | nucleus | 28.92 | 32.52 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 28.92 | 32.52 |
| CDY01503 | Canola | cytosol | 22.43 | 32.05 |
| CDY41028 | Canola | nucleus, plastid | 20.0 | 29.84 |
| Os04t0683900-01 | Rice | nucleus | 33.78 | 29.83 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 32.43 | 29.7 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 32.16 | 29.53 |
| CDY37704 | Canola | nucleus | 29.73 | 29.33 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 31.89 | 29.14 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 37.03 | 29.09 |
| Zm00001d026652_P001 | Maize | plastid | 30.81 | 28.72 |
| KXG27470 | Sorghum | nucleus | 32.16 | 28.47 |
| CDX78814 | Canola | nucleus | 30.81 | 28.01 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 30.0 | 27.89 |
| CDY52506 | Canola | nucleus | 26.22 | 27.79 |
| CDY03203 | Canola | nucleus | 26.76 | 27.65 |
| CDY08882 | Canola | nucleus | 32.43 | 27.59 |
| CDY35172 | Canola | nucleus | 26.22 | 27.48 |
| CDY65097 | Canola | nucleus | 31.08 | 27.45 |
| CDY44500 | Canola | nucleus | 31.08 | 27.38 |
| CDY16785 | Canola | nucleus | 28.92 | 27.3 |
| CDX76549 | Canola | nucleus | 32.43 | 27.27 |
| CDX92693 | Canola | nucleus | 29.19 | 27.27 |
| CDY05594 | Canola | nucleus | 26.22 | 27.25 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 38.92 | 27.12 |
| CDY49703 | Canola | nucleus | 29.19 | 27.07 |
| CDX94457 | Canola | nucleus | 27.57 | 26.98 |
| CDX87241 | Canola | nucleus | 28.38 | 26.85 |
| CDY26694 | Canola | cytosol, plastid | 18.92 | 26.72 |
| CDY38874 | Canola | nucleus | 30.54 | 26.71 |
| CDY41027 | Canola | cytosol | 19.19 | 26.69 |
| CDY00271 | Canola | nucleus | 28.92 | 26.55 |
| CDY21122 | Canola | nucleus | 27.57 | 26.42 |
| CDY26692 | Canola | nucleus | 21.62 | 26.4 |
| CDX86910 | Canola | nucleus | 28.38 | 26.32 |
| CDY26693 | Canola | plastid | 19.19 | 26.3 |
| CDX91598 | Canola | nucleus | 29.73 | 26.25 |
| CDY32624 | Canola | nucleus | 30.0 | 26.18 |
| CDY00488 | Canola | nucleus | 30.27 | 26.11 |
| CDY52477 | Canola | nucleus | 25.95 | 26.09 |
| CDY65362 | Canola | nucleus | 26.22 | 26.08 |
| CDX89422 | Canola | nucleus | 27.03 | 26.04 |
| Zm00001d001784_P002 | Maize | nucleus | 30.27 | 25.75 |
| CDY30005 | Canola | nucleus | 26.49 | 25.72 |
| HORVU7Hr1G122340.3 | Barley | nucleus | 23.78 | 25.21 |
| CDX99902 | Canola | nucleus | 29.73 | 25.06 |
| CDY30710 | Canola | nucleus | 27.03 | 24.94 |
| CDY26691 | Canola | cytosol, plastid | 20.81 | 24.76 |
| CDY01506 | Canola | nucleus | 19.73 | 24.25 |
| CDY68252 | Canola | nucleus | 19.46 | 24.24 |
| CDY13231 | Canola | nucleus | 24.86 | 22.44 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | GO:A0A078GGA9 | UniProt:A0A078GGA9 | InterPro:AT_hook_DNA-bd_motif | EnsemblPlants:CDY25500 |
| ProteinID:CDY25500 | ProteinID:CDY25500.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| EnsemblPlantsGene:GSBRNA2T00032733001 | InterPro:IPR005175 | PFAM:PF03479 | InterPro:PPC_dom | PRINTS:PR00929 | PFscan:PS51742 |
| PANTHER:PTHR31500 | PANTHER:PTHR31500:SF9 | SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI0004EF399C | SEG:seg |
Description
BnaC09g11250DBnaC09g11250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGA9]
Coordinates
chrLK032176:-:109371..111503
Molecular Weight (calculated)
38726.7 Da
IEP (calculated)
9.590
GRAVY (calculated)
-0.538
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGREAMAFP GSHYYLPRGA FTNLSPSQVA SGLHAPPPPP PGMRPMPNPN PNVHHPQTHF SMADFGHSIH MGMASPLPQP PPPMEQPLVK KKRGRPRKYA
101: PDGQVSLGLS PMPSSAGSKK AEDSSSVTDP NAPKRARGRP PGTGRKQRLA NLGEWMNTSA GFAFAPHVIS VGAGEDIVSK VMSFSQQRPR ALCIMSGTGT
201: VSSVTLRQPA TTEPSLTYEG RFEILSLGGS YLVNEEGGSK SRTGGLSVSL SGPEGHVIGG GIGMLIAASL VQVVACSFVY GGVPKSNNNN NKTIKQEGGP
301: KEEHNDSEME TTPTNNAPEA AAQVAQQTPQ NFSGQGMSGW PGSGEGSVSG SGRSLDSSRN LLTDIDLTRG
101: PDGQVSLGLS PMPSSAGSKK AEDSSSVTDP NAPKRARGRP PGTGRKQRLA NLGEWMNTSA GFAFAPHVIS VGAGEDIVSK VMSFSQQRPR ALCIMSGTGT
201: VSSVTLRQPA TTEPSLTYEG RFEILSLGGS YLVNEEGGSK SRTGGLSVSL SGPEGHVIGG GIGMLIAASL VQVVACSFVY GGVPKSNNNN NKTIKQEGGP
301: KEEHNDSEME TTPTNNAPEA AAQVAQQTPQ NFSGQGMSGW PGSGEGSVSG SGRSLDSSRN LLTDIDLTRG
001: MDGREAMAFP GSHSQFYLQR GVFTNLTPSQ VASGLHAPPP PPGMRPMSNP NIHHPQASNP GPPFSMAEHR HSDFGHSIHM GMASPAAVQP TLQLPPPPSE
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
Arabidopsis Description
AHL5AT-hook motif nuclear-localized protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.