Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G63480.1 | KRH00715 | AT3G61310.1 | 21798944 |
| AT1G63480.1 | KRH40471 | AT3G61310.1 | 21798944 |
| AT1G63480.1 | KRH48165 | AT3G61310.1 | 21798944 |
| AT1G63480.1 | KRH65066 | AT3G61310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41165 | Soybean | nucleus | 94.03 | 94.03 |
| KRH05193 | Soybean | plastid | 37.78 | 90.48 |
| KRH27929 | Soybean | nucleus | 67.9 | 67.9 |
| KRH77536 | Soybean | nucleus | 66.76 | 65.83 |
| VIT_02s0025g03580.t01 | Wine grape | nucleus | 59.38 | 60.4 |
| Solyc08g080960.2.1 | Tomato | nucleus | 50.28 | 52.99 |
| PGSC0003DMT400014926 | Potato | plastid | 51.42 | 52.46 |
| Solyc08g008030.2.1 | Tomato | nucleus | 51.42 | 52.31 |
| GSMUA_Achr5P20630_001 | Banana | nucleus, plasma membrane, plastid | 46.88 | 49.55 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 50.85 | 49.45 |
| AT1G63470.1 | Thale cress | nucleus | 52.84 | 49.21 |
| CDY25500 | Canola | nucleus | 51.14 | 48.65 |
| KRH48165 | Soybean | nucleus | 46.59 | 48.24 |
| KRH40471 | Soybean | nucleus | 46.59 | 48.09 |
| CDY45364 | Canola | nucleus | 50.0 | 47.96 |
| KRH00715 | Soybean | nucleus | 46.59 | 47.95 |
| Bra027642.1-P | Field mustard | nucleus | 51.42 | 47.51 |
| KRH65066 | Soybean | nucleus | 45.74 | 47.35 |
| Bra027801.1-P | Field mustard | nucleus | 50.0 | 46.93 |
| Bra025511.1-P | Field mustard | nucleus | 36.93 | 46.93 |
| CDY34355 | Canola | nucleus | 49.43 | 46.03 |
| GSMUA_Achr8P11400_001 | Banana | nucleus | 45.17 | 45.95 |
| PGSC0003DMT400031843 | Potato | plastid | 50.0 | 45.83 |
| AT1G63480.1 | Thale cress | nucleus | 46.59 | 45.43 |
| GSMUA_Achr11P... | Banana | nucleus | 46.88 | 44.0 |
| GSMUA_Achr11P... | Banana | nucleus | 46.31 | 43.94 |
| CDY39751 | Canola | nucleus | 44.6 | 41.1 |
| CDY46385 | Canola | nucleus | 44.32 | 40.84 |
| GSMUA_Achr1P03070_001 | Banana | cytosol, extracellular, nucleus | 22.73 | 40.82 |
| GSMUA_Achr4P30000_001 | Banana | nucleus | 36.65 | 39.57 |
| HORVU2Hr1G123730.3 | Barley | plastid | 21.59 | 36.19 |
| Zm00001d018515_P002 | Maize | nucleus | 39.2 | 35.57 |
| KRH57315 | Soybean | nucleus | 32.39 | 34.86 |
| KRH04046 | Soybean | nucleus | 32.67 | 34.74 |
| OQU85994 | Sorghum | nucleus | 39.2 | 34.41 |
| Os02t0824300-01 | Rice | nucleus | 38.35 | 34.26 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 38.64 | 34.0 |
| TraesCS7A01G565900.1 | Wheat | nucleus | 29.55 | 33.88 |
| KRH40594 | Soybean | nucleus | 31.25 | 32.64 |
| KRH34345 | Soybean | nucleus | 30.4 | 32.42 |
| KRH00569 | Soybean | cytosol, peroxisome, plastid | 30.97 | 32.25 |
| KRH65263 | Soybean | cytosol, nucleus, plastid | 31.25 | 31.79 |
| KRH76268 | Soybean | cytosol, nucleus, plastid | 31.25 | 31.79 |
| KRG92455 | Soybean | nucleus | 29.55 | 31.52 |
| KRH58200 | Soybean | nucleus | 31.53 | 30.66 |
| KRH51558 | Soybean | nucleus | 30.4 | 30.14 |
| KRH38723 | Soybean | nucleus | 28.98 | 29.65 |
| KRH09229 | Soybean | nucleus | 28.98 | 29.65 |
| KRH60876 | Soybean | nucleus | 29.83 | 29.41 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 33.24 | 29.03 |
| TraesCS2A01G582300.1 | Wheat | nucleus | 32.95 | 28.71 |
| KRH28286 | Soybean | plastid | 27.56 | 28.61 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 38.07 | 28.45 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 32.39 | 28.15 |
| KRH77206 | Soybean | nucleus | 26.99 | 28.11 |
| KRH04337 | Soybean | nucleus | 28.41 | 28.09 |
| Os04t0683900-01 | Rice | nucleus | 32.95 | 27.68 |
| Zm00001d026652_P001 | Maize | plastid | 30.97 | 27.46 |
| KRH20019 | Soybean | nucleus | 29.55 | 27.44 |
| KRH68809 | Soybean | nucleus | 26.7 | 27.17 |
| KRG97062 | Soybean | nucleus | 27.27 | 26.59 |
| KXG27470 | Sorghum | nucleus | 31.53 | 26.55 |
| TraesCS6A01G403700.1 | Wheat | nucleus | 39.77 | 26.37 |
| KRH32644 | Soybean | plastid | 29.26 | 26.01 |
| Zm00001d001784_P002 | Maize | nucleus | 30.4 | 24.6 |
| HORVU7Hr1G122340.3 | Barley | nucleus | 22.73 | 22.92 |
| KRH25156 | Soybean | cytosol | 15.91 | 21.54 |
| KRH30520 | Soybean | nucleus | 21.88 | 20.81 |
Protein Annotations
| EMBL:ACUP02003342 | EnsemblPlants:KRH59866 | EnsemblPlantsGene:GLYMA_05G207300 | EntrezGene:100798706 | Gene3D:3.30.1330.80 | InterPro:IPR005175 |
| InterPro:PPC_dom | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF9 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:KRH59866 |
| ProteinID:KRH59866.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0002339868 | UniProt:I1K6J5 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr5:-:38947662..38951376
Molecular Weight (calculated)
36084.6 Da
IEP (calculated)
10.149
GRAVY (calculated)
-0.342
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGREAMAFS DGSAPYYMHR VGVGGSGSGF QPAPGFRPLS NTGIQAESNA RGGQGQGGGS VGSNSPFSVE PPQGHANFNH GIGIGAPSRE PVKKKRGRPR
101: KYGPDGAVSL RLSPMSAPAN STQDASETTP SQKKARGRPP GSGRKQQLAA LGEWMNSSAG LAFSPHVITI GVGEDIVAKL LSLSQQRPRA LCIMSGTGTV
201: SSVTLRQPAS TNASVTFEGR FQILCLSGSY LVAEDGGPLN RTGGISVSLS SPDGHVIGGG VAVLIAGSPV QVMLCSFVYG GSKTMSKQAT TLKDESSEPP
301: PQHNDKLASP ASAPAPPGQN FLPLSAANLW PGSRPAELKS AHMHTGIDLT HG
101: KYGPDGAVSL RLSPMSAPAN STQDASETTP SQKKARGRPP GSGRKQQLAA LGEWMNSSAG LAFSPHVITI GVGEDIVAKL LSLSQQRPRA LCIMSGTGTV
201: SSVTLRQPAS TNASVTFEGR FQILCLSGSY LVAEDGGPLN RTGGISVSLS SPDGHVIGGG VAVLIAGSPV QVMLCSFVYG GSKTMSKQAT TLKDESSEPP
301: PQHNDKLASP ASAPAPPGQN FLPLSAANLW PGSRPAELKS AHMHTGIDLT HG
001: MDGREAMAFP GSHSQFYLQR GVFTNLTPSQ VASGLHAPPP PPGMRPMSNP NIHHPQASNP GPPFSMAEHR HSDFGHSIHM GMASPAAVQP TLQLPPPPSE
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
101: QPMVKKKRGR PRKYVPDGQV SLGLSPMPCV SKKSKDSSSM SDPNAPKRAR GRPPGTGRKQ RLANLGEWMN TSAGLAFAPH VISVGSGEDI VSKVLSFSQK
201: RPRALCIMSG TGTVSSVTLR EPASTTPSLT FEGRFEILSL GGSYLVNEEG GSKSRTGGLS VSLSGPEGHV IGGGIGMLIA ASLVQVVACS FVYGASAKSN
301: NNNNKTIKQE IKPKQEPTNS EMETTPGSAP EAAASTGQHT PQNFPAQGMS GWPVSGSGSG RSLDSSRNPL TDIDLTRG
Arabidopsis Description
AHL5AT-hook motif nuclear-localized protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.