Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58200 | Soybean | nucleus | 85.11 | 83.7 |
| KRH77206 | Soybean | nucleus | 57.3 | 60.35 |
| KRH28286 | Soybean | plastid | 56.18 | 59.0 |
| VIT_02s0012g00900.t01 | Wine grape | nucleus | 55.06 | 55.52 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 24.72 | 46.32 |
| Os10t0572900-02 | Rice | nucleus | 32.58 | 46.22 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 42.13 | 42.61 |
| HORVU2Hr1G105800.13 | Barley | cytosol, vacuole | 35.11 | 40.72 |
| Os04t0589900-01 | Rice | nucleus | 41.85 | 39.31 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 39.33 | 39.22 |
| OQU82226 | Sorghum | plastid | 38.2 | 39.19 |
| Solyc04g053090.1.1 | Tomato | plastid | 18.26 | 38.46 |
| PGSC0003DMT400052826 | Potato | nucleus | 37.64 | 37.22 |
| CDY01503 | Canola | cytosol | 26.97 | 37.07 |
| AT5G46640.1 | Thale cress | nucleus | 39.89 | 36.79 |
| HORVU7Hr1G065300.2 | Barley | mitochondrion, plastid | 19.38 | 36.51 |
| Zm00001d026036_P001 | Maize | nucleus | 40.73 | 36.07 |
| KRH00715 | Soybean | nucleus | 33.99 | 35.38 |
| KRH40471 | Soybean | nucleus | 33.71 | 35.19 |
| Solyc04g053100.1.1 | Tomato | plastid | 16.29 | 34.94 |
| CDY03203 | Canola | nucleus | 35.11 | 34.92 |
| Bra017536.1-P | Field mustard | nucleus | 34.55 | 34.84 |
| CDY35172 | Canola | nucleus | 34.55 | 34.84 |
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 40.17 | 34.71 |
| CDY68252 | Canola | nucleus | 28.93 | 34.68 |
| CDX78814 | Canola | nucleus | 39.61 | 34.64 |
| TraesCS2A01G449500.1 | Wheat | plastid | 39.89 | 34.63 |
| Zm00001d030053_P003 | Maize | plastid | 40.45 | 34.53 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 39.89 | 34.47 |
| KRH60876 | Soybean | nucleus | 34.55 | 34.45 |
| KRH48165 | Soybean | nucleus | 32.87 | 34.41 |
| KXG38867 | Sorghum | plastid | 40.73 | 34.28 |
| Zm00001d047042_P004 | Maize | cytosol, nucleus, plasma membrane | 41.29 | 34.27 |
| KRH65066 | Soybean | nucleus | 32.58 | 34.12 |
| Bra021027.1-P | Field mustard | nucleus | 39.04 | 33.9 |
| KRH51558 | Soybean | nucleus | 33.43 | 33.52 |
| AT4G17950.1 | Thale cress | nucleus | 41.29 | 33.49 |
| Bra025716.1-P | Field mustard | nucleus | 25.28 | 33.46 |
| KRH76268 | Soybean | cytosol, nucleus, plastid | 32.3 | 33.24 |
| KRH65263 | Soybean | cytosol, nucleus, plastid | 32.3 | 33.24 |
| CDY08882 | Canola | nucleus | 40.45 | 33.1 |
| CDY26693 | Canola | plastid | 25.0 | 32.96 |
| CDY44500 | Canola | nucleus | 38.76 | 32.86 |
| KRH05193 | Soybean | plastid | 13.48 | 32.65 |
| CDX76549 | Canola | nucleus | 40.17 | 32.5 |
| Bra025717.1-P | Field mustard | nucleus | 27.53 | 32.34 |
| CDY26692 | Canola | nucleus | 27.53 | 32.34 |
| CDY41028 | Canola | nucleus, plastid | 22.47 | 32.26 |
| TraesCS1B01G206100.2 | Wheat | nucleus | 40.73 | 32.15 |
| KRH34345 | Soybean | nucleus | 29.78 | 32.12 |
| CDY41027 | Canola | cytosol | 23.88 | 31.95 |
| TraesCS1D01G194900.2 | Wheat | nucleus | 40.73 | 31.94 |
| TraesCS1A01G190900.1 | Wheat | nucleus | 40.73 | 31.94 |
| KRH00569 | Soybean | cytosol, peroxisome, plastid | 30.06 | 31.66 |
| KRG92455 | Soybean | nucleus | 29.21 | 31.52 |
| KRH57315 | Soybean | nucleus | 28.93 | 31.5 |
| KRH40594 | Soybean | nucleus | 29.78 | 31.45 |
| HORVU1Hr1G049980.12 | Barley | nucleus | 40.73 | 31.25 |
| Bra025718.1-P | Field mustard | nucleus, plastid | 26.4 | 30.92 |
| CDY26694 | Canola | cytosol, plastid | 22.75 | 30.92 |
| CDY26691 | Canola | cytosol, plastid | 26.97 | 30.87 |
| KRH04046 | Soybean | nucleus | 28.65 | 30.82 |
| Solyc08g006950.2.1 | Tomato | nucleus | 33.71 | 30.69 |
| KRH09229 | Soybean | nucleus | 29.21 | 30.23 |
| KRH38723 | Soybean | nucleus | 28.93 | 29.94 |
| KRH27929 | Soybean | nucleus | 29.49 | 29.83 |
| CDY01506 | Canola | nucleus | 24.72 | 29.24 |
| Bra013270.1-P | Field mustard | nucleus | 34.55 | 28.87 |
| KRH77536 | Soybean | nucleus | 28.65 | 28.57 |
| KRH59866 | Soybean | nucleus | 28.09 | 28.41 |
| KRH41165 | Soybean | nucleus | 27.81 | 28.12 |
| KRH68809 | Soybean | nucleus | 27.25 | 28.03 |
| KRG97062 | Soybean | nucleus | 28.09 | 27.7 |
| KRH20019 | Soybean | nucleus | 29.21 | 27.44 |
| KRH32644 | Soybean | plastid | 28.37 | 25.51 |
| KRH25156 | Soybean | cytosol | 18.26 | 25.0 |
| KRH30520 | Soybean | nucleus | 23.6 | 22.7 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A0R0FLQ1 | EMBL:ACUP02010400 | EMBL:ACUP02010401 | InterPro:AT_hook_DNA-bd_motif | EnsemblPlantsGene:GLYMA_17G155200 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:IPR005175 | EnsemblPlants:KRH04337 |
| ProteinID:KRH04337 | ProteinID:KRH04337.1 | ProteinID:KRH04338.1 | PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31500 | PANTHER:PTHR31500:SF17 | SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI0006EDDEE8 | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:13112585..13118577
Molecular Weight (calculated)
36030.7 Da
IEP (calculated)
9.793
GRAVY (calculated)
-0.244
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVRETPRPP PPTMMVGPTS YGSTNLGPNF SSSSAAAMLA PATARFPFGA VPPPQQHQPP PSSEPFPASA AYDGSSSPMK PCSLAKKKRG RPRKYSPDGS
101: IALGLAPTHT SPPASAAAGG GSAGDSAGTA SADAPAKKHR GRPPGSGKKQ LDALGAGGVG FTPHVIMVES GEDITAKIMA FSQQGPRTVC ILSAIGAIGN
201: VTLRQPAMSG GIATYEVLCS NLKITVIVAE HALLNVTLAG SDGRVLGGGV AGTLTAASTV QVIVGSFIAF AKKSSSSALK SGSSSAPPPQ MLTFGAPMTP
301: NSPTSQGPST ESSEEQDHSP FCRGPGPGHG LYNNASQPVH NMPMYHHPLW AGQSHQ
101: IALGLAPTHT SPPASAAAGG GSAGDSAGTA SADAPAKKHR GRPPGSGKKQ LDALGAGGVG FTPHVIMVES GEDITAKIMA FSQQGPRTVC ILSAIGAIGN
201: VTLRQPAMSG GIATYEVLCS NLKITVIVAE HALLNVTLAG SDGRVLGGGV AGTLTAASTV QVIVGSFIAF AKKSSSSALK SGSSSAPPPQ MLTFGAPMTP
301: NSPTSQGPST ESSEEQDHSP FCRGPGPGHG LYNNASQPVH NMPMYHHPLW AGQSHQ
001: MDSREIHHQQ QQQQQQQQQQ QQQQQHLQQQ QQPPPGMLMS HHNSYNRNPN AAAAVLMGHN TSTSQAMHQR LPFGGSMSPH QPQQHQYHHP QPQQQIDQKT
101: LESLGFDGSP SSVAATQQHS MRFGIDHQQV KKKRGRPRKY AADGGGGGGG GSNIALGLAP TSPLPSASNS YGGGNEGGGG GDSAGANANS SDPPAKRNRG
201: RPPGSGKKQL DALGGTGGVG FTPHVIEVKT GEDIATKILA FTNQGPRAIC ILSATGAVTN VMLRQANNSN PTGTVKYEGR FEIISLSGSF LNSESNGTVT
301: KTGNLSVSLA GHEGRIVGGC VDGMLVAGSQ VQVIVGSFVP DGRKQKQSAG RAQNTPEPAS APANMLSFGG VGGPGSPRSQ GQQHSSESSE ENESNSPLHR
401: RSNNNNSNNH GIFGNSTPQP LHQIPMQMYQ NLWPGNSPQ
101: LESLGFDGSP SSVAATQQHS MRFGIDHQQV KKKRGRPRKY AADGGGGGGG GSNIALGLAP TSPLPSASNS YGGGNEGGGG GDSAGANANS SDPPAKRNRG
201: RPPGSGKKQL DALGGTGGVG FTPHVIEVKT GEDIATKILA FTNQGPRAIC ILSATGAVTN VMLRQANNSN PTGTVKYEGR FEIISLSGSF LNSESNGTVT
301: KTGNLSVSLA GHEGRIVGGC VDGMLVAGSQ VQVIVGSFVP DGRKQKQSAG RAQNTPEPAS APANMLSFGG VGGPGSPRSQ GQQHSSESSE ENESNSPLHR
401: RSNNNNSNNH GIFGNSTPQP LHQIPMQMYQ NLWPGNSPQ
Arabidopsis Description
AHL13AT-hook motif nuclear-localized protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q940I0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.