Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G449500.1 | Wheat | plastid | 96.36 | 96.83 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 95.63 | 95.63 |
| HORVU2Hr1G105800.13 | Barley | cytosol, vacuole | 68.2 | 91.53 |
| HORVU7Hr1G065300.2 | Barley | mitochondrion, plastid | 38.59 | 84.13 |
| Os04t0589900-01 | Rice | nucleus | 75.73 | 82.32 |
| OQU82226 | Sorghum | plastid | 68.69 | 81.56 |
| Zm00001d026036_P001 | Maize | nucleus | 72.57 | 74.38 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 28.16 | 61.05 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 43.45 | 50.85 |
| VIT_02s0012g00900.t01 | Wine grape | nucleus | 41.99 | 49.01 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 42.23 | 48.74 |
| Solyc04g053090.1.1 | Tomato | plastid | 18.93 | 46.15 |
| PGSC0003DMT400045147 | Potato | plastid | 35.44 | 44.24 |
| TraesCS1B01G206100.2 | Wheat | nucleus | 47.09 | 43.02 |
| TraesCS7B01G143000.1 | Wheat | nucleus | 37.62 | 42.94 |
| Solyc04g053100.1.1 | Tomato | plastid | 16.99 | 42.17 |
| KRH58200 | Soybean | nucleus | 36.16 | 41.16 |
| KRH04337 | Soybean | nucleus | 34.71 | 40.17 |
| TraesCS5B01G266600.1 | Wheat | endoplasmic reticulum, mitochondrion, nucleus, peroxisome | 37.62 | 39.24 |
| CDY01503 | Canola | cytosol | 24.27 | 38.61 |
| KRH77206 | Soybean | nucleus | 31.55 | 38.46 |
| Solyc08g077030.2.1 | Tomato | nucleus | 38.11 | 38.39 |
| PGSC0003DMT400052826 | Potato | nucleus | 33.25 | 38.06 |
| KRH28286 | Soybean | plastid | 31.31 | 38.05 |
| AT5G46640.1 | Thale cress | nucleus | 33.74 | 36.01 |
| CDY03203 | Canola | nucleus | 29.61 | 34.08 |
| CDY41028 | Canola | nucleus, plastid | 20.39 | 33.87 |
| CDY41027 | Canola | cytosol | 21.84 | 33.83 |
| CDY35172 | Canola | nucleus | 28.88 | 33.71 |
| Bra017536.1-P | Field mustard | nucleus | 28.88 | 33.71 |
| CDY68252 | Canola | nucleus | 24.27 | 33.67 |
| Bra025716.1-P | Field mustard | nucleus | 21.84 | 33.46 |
| TraesCS5B01G130400.1 | Wheat | plastid | 29.85 | 33.42 |
| Solyc08g006950.2.1 | Tomato | nucleus | 31.55 | 33.25 |
| CDX78814 | Canola | nucleus | 32.77 | 33.17 |
| TraesCS5B01G129200.1 | Wheat | plastid | 29.37 | 32.97 |
| CDY26693 | Canola | plastid | 21.6 | 32.96 |
| Bra021027.1-P | Field mustard | nucleus | 32.77 | 32.93 |
| CDY26694 | Canola | cytosol, plastid | 20.63 | 32.44 |
| CDY08882 | Canola | nucleus | 34.22 | 32.41 |
| Bra025717.1-P | Field mustard | nucleus | 23.79 | 32.34 |
| CDY26692 | Canola | nucleus | 23.79 | 32.34 |
| CDX76549 | Canola | nucleus | 34.47 | 32.27 |
| CDY01506 | Canola | nucleus | 23.54 | 32.23 |
| CDY44500 | Canola | nucleus | 32.77 | 32.14 |
| CDY26691 | Canola | cytosol, plastid | 24.03 | 31.83 |
| TraesCS7B01G215600.1 | Wheat | plastid | 30.34 | 31.73 |
| AT4G17950.1 | Thale cress | nucleus | 33.74 | 31.66 |
| Bra025718.1-P | Field mustard | nucleus, plastid | 23.3 | 31.58 |
| TraesCS7B01G035400.1 | Wheat | cytosol | 15.29 | 31.5 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 29.85 | 30.52 |
| Bra013270.1-P | Field mustard | nucleus | 31.31 | 30.28 |
| TraesCS6B01G114000.1 | Wheat | cytosol, nucleus, peroxisome | 27.18 | 28.64 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 32.52 | 28.45 |
| TraesCS7B01G035900.1 | Wheat | nucleus | 22.82 | 25.9 |
| TraesCS5B01G266500.1 | Wheat | cytosol | 0.97 | 3.42 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G470900.1 | EnsemblPlantsGene:TraesCS2B01G470900 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF25 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:667413879..667417330
Molecular Weight (calculated)
41798.5 Da
IEP (calculated)
9.571
GRAVY (calculated)
-0.477
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRDQPQQQ QQTPTPLPLP LPPPPQQQTP APPQQQTPRV SSPPPVAPGV MMPQHAYGAM PPGSASVMHG MPLAFNPMAS PGASQPAMKP ADMPPLAMYR
101: PDSTPPGMPQ PVSGGGGALV VSVSGSGGGR ELVKKKRGRP RKYGPDGTMG SAVKAEAGGQ SGGAGSNSNP DGKRRGRPPG SGKKKQLDAL GSAGTSFTPH
201: IITVKPNEDV ASKIMSFSQQ GPRTTCIISA NGALCTATLR QPATSGGIVT YEGHFDILSL SGSFLLAEDG DTRSRTGGLS VALAGSDGRI VGGCVAGMLM
301: AATPVQVVVG SFIAEGNKKP KEEQPKREPT SAPMLTSAPM QTAAGFGAAS AAATPSDGTS SDHSDDPGSP MGPNGSAFNN AGHPTHASYA PVGWSLSGNQ
401: GRYDPDMKMV TD
101: PDSTPPGMPQ PVSGGGGALV VSVSGSGGGR ELVKKKRGRP RKYGPDGTMG SAVKAEAGGQ SGGAGSNSNP DGKRRGRPPG SGKKKQLDAL GSAGTSFTPH
201: IITVKPNEDV ASKIMSFSQQ GPRTTCIISA NGALCTATLR QPATSGGIVT YEGHFDILSL SGSFLLAEDG DTRSRTGGLS VALAGSDGRI VGGCVAGMLM
301: AATPVQVVVG SFIAEGNKKP KEEQPKREPT SAPMLTSAPM QTAAGFGAAS AAATPSDGTS SDHSDDPGSP MGPNGSAFNN AGHPTHASYA PVGWSLSGNQ
401: GRYDPDMKMV TD
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.