Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G129200.1 | Wheat | plastid | 97.28 | 97.55 |
| TraesCS5D01G138000.1 | Wheat | plastid | 96.74 | 97.0 |
| TraesCS5A01G130500.1 | Wheat | plastid | 96.2 | 95.94 |
| HORVU5Hr1G041290.4 | Barley | cytosol, nucleus, peroxisome | 94.02 | 92.76 |
| Os11t0149100-01 | Rice | cytosol, nucleus, peroxisome | 77.72 | 78.14 |
| EES15662 | Sorghum | cytosol, nucleus, peroxisome | 72.01 | 74.44 |
| Zm00001d052495_P001 | Maize | cytosol, nucleus, peroxisome | 71.2 | 74.22 |
| EES07975 | Sorghum | cytosol | 71.74 | 72.93 |
| Zm00001d004924_P001 | Maize | cytosol | 68.21 | 70.11 |
| Os12t0147000-00 | Rice | nucleus | 72.55 | 70.08 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 38.59 | 42.26 |
| GSMUA_Achr2P20250_001 | Banana | cytosol, peroxisome, plastid | 38.86 | 38.96 |
| GSMUA_Achr6P13410_001 | Banana | cytosol, nucleus, peroxisome | 38.04 | 38.25 |
| VIT_08s0007g04020.t01 | Wine grape | nucleus | 36.96 | 37.67 |
| KRH20019 | Soybean | nucleus | 33.97 | 32.98 |
| TraesCS7B01G143000.1 | Wheat | nucleus | 31.52 | 32.13 |
| KRH32644 | Soybean | plastid | 33.15 | 30.81 |
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 33.42 | 29.85 |
| TraesCS7B01G215600.1 | Wheat | plastid | 31.79 | 29.7 |
| TraesCS5B01G266600.1 | Wheat | endoplasmic reticulum, mitochondrion, nucleus, peroxisome | 31.79 | 29.62 |
| PGSC0003DMT400007056 | Potato | nucleus | 32.61 | 29.56 |
| KRH25156 | Soybean | cytosol | 20.65 | 29.23 |
| Solyc09g008940.2.1 | Tomato | nucleus | 32.61 | 28.78 |
| GSMUA_Achr3P03040_001 | Banana | nucleus, peroxisome, plasma membrane | 36.96 | 28.1 |
| TraesCS6B01G114000.1 | Wheat | cytosol, nucleus, peroxisome | 29.08 | 27.37 |
| TraesCS7B01G035400.1 | Wheat | cytosol | 14.67 | 27.0 |
| TraesCS1B01G206100.2 | Wheat | nucleus | 31.79 | 25.94 |
| KRH30520 | Soybean | nucleus | 24.73 | 24.59 |
| TraesCS2B01G604700.1 | Wheat | nucleus | 26.63 | 24.32 |
| TraesCS6B01G447600.1 | Wheat | nucleus | 30.71 | 23.99 |
| TraesCS7B01G035900.1 | Wheat | nucleus | 19.84 | 20.11 |
| TraesCS5B01G266500.1 | Wheat | cytosol | 0.82 | 2.56 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G130400.1 | EnsemblPlantsGene:TraesCS5B01G130400 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF24 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:242136149..242138271
Molecular Weight (calculated)
37587.7 Da
IEP (calculated)
9.567
GRAVY (calculated)
-0.189
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRVGIAVA GGHEAGLGLF RADVSMAEPQ GAAKVEYRSS PSSPSTSPTP SPPQASAGHG GGYAAATPHA WSFGGEQEKP SEASAGDKGN GNGMQMAGDG
101: EQVAGLSSGR RRGRPRGSGR RQILATLGEW YALSAGGSFT PHVIIVPARE DVAARIMSFS QRGPRSVCIL AASGTISNVA FNKPGSSGSS DSTFTYEGLF
201: EILQLTGSFT MAEEGGRKRT GGLSVSLAGP DGRVIGGVVA GMLRAATPIQ VIVGSFLPNS LKQHQRRMGL HPQPSAVPAL PVADAPPPVL TAAMPISQAA
301: PSNGRHGPPV PMAPLQVHAN VEHTATTGPM NLNSSSAGFT MVGWPVGAQP IMGHRLSPDI NLCLTPQE
101: EQVAGLSSGR RRGRPRGSGR RQILATLGEW YALSAGGSFT PHVIIVPARE DVAARIMSFS QRGPRSVCIL AASGTISNVA FNKPGSSGSS DSTFTYEGLF
201: EILQLTGSFT MAEEGGRKRT GGLSVSLAGP DGRVIGGVVA GMLRAATPIQ VIVGSFLPNS LKQHQRRMGL HPQPSAVPAL PVADAPPPVL TAAMPISQAA
301: PSNGRHGPPV PMAPLQVHAN VEHTATTGPM NLNSSSAGFT MVGWPVGAQP IMGHRLSPDI NLCLTPQE
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Arabidopsis Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.